Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002471.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX80156 | Canola | cytosol | 99.2 | 98.15 |
| AT5G60570.2 | Thale cress | cytosol | 92.27 | 88.04 |
| Solyc11g069320.1.1 | Tomato | plastid | 43.2 | 74.31 |
| VIT_06s0004g02980.t01 | Wine grape | cytosol | 68.8 | 70.88 |
| KRH26429 | Soybean | cytosol | 66.67 | 68.68 |
| KRH29930 | Soybean | cytosol | 61.07 | 65.99 |
| KRH24879 | Soybean | cytosol | 69.07 | 65.24 |
| PGSC0003DMT400020936 | Potato | cytosol | 66.93 | 64.69 |
| KRH22905 | Soybean | cytosol | 66.67 | 64.27 |
| KRH12864 | Soybean | cytosol, plasma membrane | 53.07 | 61.23 |
| KXG27134 | Sorghum | cytosol | 43.2 | 60.22 |
| GSMUA_Achr3P23350_001 | Banana | cytosol, extracellular | 50.93 | 47.39 |
| TraesCS2D01G463000.1 | Wheat | cytosol | 54.67 | 45.86 |
| GSMUA_Achr9P30470_001 | Banana | cytosol | 47.73 | 45.78 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 54.13 | 45.21 |
| TraesCS2B01G484200.1 | Wheat | cytosol | 53.87 | 44.99 |
| CDY33755 | Canola | cytosol | 14.67 | 44.72 |
| HORVU2Hr1G103880.2 | Barley | cytosol | 53.07 | 44.62 |
| Zm00001d026321_P001 | Maize | cytosol | 52.8 | 44.2 |
| Os04t0619300-01 | Rice | cytosol, extracellular | 55.47 | 43.7 |
| CDY70379 | Canola | cytosol | 18.4 | 43.67 |
| OQU82347 | Sorghum | mitochondrion | 53.87 | 42.8 |
| Zm00001d002284_P003 | Maize | mitochondrion | 54.13 | 41.6 |
| GSMUA_Achr11P... | Banana | cytosol | 45.87 | 39.09 |
| CDY52764 | Canola | cytosol | 43.47 | 38.35 |
| CDY46430 | Canola | cytosol | 43.47 | 38.26 |
| Zm00001d007538_P001 | Maize | cytosol | 30.13 | 38.05 |
| CDY16205 | Canola | nucleus | 42.4 | 37.59 |
| CDX73096 | Canola | cytosol | 40.0 | 37.41 |
| CDX96551 | Canola | cytosol | 40.27 | 37.19 |
| CDY62015 | Canola | nucleus | 40.8 | 36.87 |
| CDY60836 | Canola | cytosol | 37.07 | 36.58 |
| CDX81631 | Canola | nucleus | 39.47 | 36.19 |
| CDY09349 | Canola | nucleus | 42.67 | 36.04 |
| CDY49094 | Canola | nucleus | 40.53 | 35.85 |
| CDX68177 | Canola | cytosol | 39.47 | 35.49 |
| CDY62176 | Canola | nucleus | 42.13 | 35.35 |
| CDY66938 | Canola | cytosol, mitochondrion | 16.27 | 34.66 |
| CDY03028 | Canola | cytosol | 41.33 | 34.52 |
| CDX85842 | Canola | cytosol | 39.2 | 34.43 |
| CDY17425 | Canola | cytosol | 36.53 | 34.16 |
| CDY65956 | Canola | cytosol | 17.07 | 34.04 |
| CDY45190 | Canola | nucleus | 41.07 | 34.0 |
| CDX82682 | Canola | cytosol | 26.4 | 31.63 |
| CDY53460 | Canola | cytosol | 14.67 | 31.25 |
| CDY28493 | Canola | cytosol | 32.53 | 29.68 |
| CDY34175 | Canola | cytosol | 32.27 | 29.44 |
| Zm00001d019862_P001 | Maize | cytosol | 52.27 | 28.66 |
| CDY13683 | Canola | cytosol | 32.8 | 28.41 |
| CDY33754 | Canola | nucleus | 18.93 | 28.4 |
| CDY36146 | Canola | cytosol | 31.2 | 28.06 |
| CDY63005 | Canola | cytosol | 31.2 | 28.06 |
| CDY69929 | Canola | cytosol | 31.2 | 28.06 |
| CDY52395 | Canola | cytosol | 31.73 | 27.48 |
| CDY49979 | Canola | cytosol | 29.6 | 27.21 |
| CDX90239 | Canola | cytosol | 28.8 | 27.2 |
| CDY64780 | Canola | cytosol | 30.93 | 26.73 |
| CDY12345 | Canola | cytosol | 29.6 | 24.4 |
| CDY18573 | Canola | cytosol | 22.13 | 23.85 |
| CDY22982 | Canola | cytosol | 21.87 | 23.7 |
| CDY58259 | Canola | cytosol | 21.87 | 23.63 |
| CDX82306 | Canola | cytosol | 21.6 | 23.41 |
| CDX99248 | Canola | cytosol | 21.6 | 23.28 |
| CDY12647 | Canola | cytosol | 21.33 | 22.1 |
| CDY49977 | Canola | cytosol | 26.93 | 21.49 |
| CDX96091 | Canola | cytosol | 21.07 | 21.18 |
| CDY01812 | Canola | cytosol | 20.53 | 20.64 |
| CDY26295 | Canola | mitochondrion, plastid | 21.87 | 20.6 |
| CDX99882 | Canola | mitochondrion, plastid | 21.6 | 20.35 |
| CDX81755 | Canola | cytosol | 20.8 | 20.0 |
| CDX76807 | Canola | cytosol | 19.2 | 19.51 |
| CDY66857 | Canola | cytosol | 18.4 | 19.38 |
| CDY01300 | Canola | cytosol | 11.47 | 19.2 |
| CDY36145 | Canola | cytosol | 17.87 | 19.14 |
| CDY34765 | Canola | cytosol | 18.93 | 19.09 |
| CDY70128 | Canola | cytosol | 17.07 | 18.99 |
| CDY64883 | Canola | golgi, plastid | 20.8 | 18.98 |
| CDY03923 | Canola | cytosol | 17.07 | 18.93 |
| CDY08233 | Canola | mitochondrion | 21.87 | 18.85 |
| CDX90085 | Canola | plastid | 17.33 | 18.84 |
| CDY64382 | Canola | plastid | 17.07 | 18.71 |
| CDY00415 | Canola | mitochondrion | 10.67 | 18.69 |
| CDY35074 | Canola | cytosol | 10.4 | 18.66 |
| CDY26117 | Canola | cytosol | 21.6 | 18.62 |
| CDY11811 | Canola | plastid | 17.07 | 18.55 |
| CDY52247 | Canola | cytosol | 15.73 | 18.44 |
| CDY24045 | Canola | mitochondrion | 21.33 | 18.39 |
| CDY33062 | Canola | mitochondrion, plastid | 21.33 | 18.39 |
| CDY04697 | Canola | cytosol | 10.93 | 18.39 |
| CDY30645 | Canola | nucleus | 10.93 | 18.39 |
| CDY15708 | Canola | cytosol | 16.8 | 18.37 |
| CDY51562 | Canola | cytosol | 17.33 | 18.11 |
| CDX96822 | Canola | extracellular, vacuole | 20.8 | 18.06 |
| CDY02451 | Canola | cytosol | 20.8 | 17.93 |
| CDY10574 | Canola | cytosol | 20.8 | 17.93 |
| CDY01301 | Canola | cytosol | 7.47 | 17.83 |
| CDY58793 | Canola | cytosol | 17.07 | 17.83 |
| CDY17172 | Canola | cytosol | 6.67 | 17.36 |
| CDY33348 | Canola | cytosol | 8.0 | 16.67 |
| CDY54825 | Canola | cytosol | 8.53 | 16.58 |
| CDY15707 | Canola | cytosol, plastid | 14.4 | 15.3 |
| CDY35075 | Canola | cytosol | 6.4 | 13.04 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 11.73 | 12.46 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078H2B5 | EnsemblPlants:CDY31534 | ProteinID:CDY31534 | ProteinID:CDY31534.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00047848001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24413 | PANTHER:PTHR24413:SF169 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI00025440DE |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g13370DBnaA10g13370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2B5]
Coordinates
chrLK032274:-:140942..142755
Molecular Weight (calculated)
41791.6 Da
IEP (calculated)
7.734
GRAVY (calculated)
-0.133
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEQSQVS ASASVVENDA QRLRLGSSDS LLPGLIDDVA LNCLAWVPRT DYPSLSCVSK KYNNLIKSGH LFGLRKELGI VEYLVFMVCD PRGWLMFSPT
101: KKKWMVLPKM PCDECFNHAD KESLAVDDEL LVFGRELFQF AIWKYGLRSR RWVKCEGMHR PRCLFASGSL GGIAIVAGGT DMNGNILASA ELYDSSSGRW
201: EMLPNMHSPR RLCSGFFMDG RFYVVGGMSS PNVSVTCGEE FDLETRKWRK IEGMYPNVNR AAQAPPLVVV VNNELFTLEY LTNMVKRYDK ERNKWEVMGR
301: LPPMVDSSNG WGLAFKPCGD QLLVVCGQRG SNGEGVVVNA WCPKTGARDG NLDWKVIGVK ENVGVFVYNC AVMGC
101: KKKWMVLPKM PCDECFNHAD KESLAVDDEL LVFGRELFQF AIWKYGLRSR RWVKCEGMHR PRCLFASGSL GGIAIVAGGT DMNGNILASA ELYDSSSGRW
201: EMLPNMHSPR RLCSGFFMDG RFYVVGGMSS PNVSVTCGEE FDLETRKWRK IEGMYPNVNR AAQAPPLVVV VNNELFTLEY LTNMVKRYDK ERNKWEVMGR
301: LPPMVDSSNG WGLAFKPCGD QLLVVCGQRG SNGEGVVVNA WCPKTGARDG NLDWKVIGVK ENVGVFVYNC AVMGC
001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC
Arabidopsis Description
F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.