Factsheet for Zm00001d002284_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82347	Sorghum	mitochondrion	93.65	96.82
Zm00001d026321_P001	Maize	cytosol	84.84	92.41
Os04t0619300-01	Rice	cytosol, extracellular	82.17	84.24
TraesCS2B01G484200.1	Wheat	cytosol	77.25	83.96
TraesCS2A01G462600.1	Wheat	cytosol	76.84	83.52
TraesCS2D01G463000.1	Wheat	cytosol	76.43	83.45
HORVU2Hr1G103880.2	Barley	cytosol	76.23	83.41
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	58.2	70.47
VIT_16s0039g01470.t01	Wine grape	cytosol	55.33	70.31
GSMUA_Achr9P30470_001	Banana	cytosol	54.1	67.52
Solyc11g069320.1.1	Tomato	plastid	29.92	66.97
KRH26429	Soybean	cytosol	46.31	62.09
Zm00001d007538_P001	Maize	cytosol	37.3	61.28
GSMUA_Achr11P...	Banana	cytosol	53.48	59.32
KRH22905	Soybean	cytosol	47.13	59.13
PGSC0003DMT400020936	Potato	cytosol	46.31	58.25
KRH24879	Soybean	cytosol	46.52	57.18
KRH29930	Soybean	cytosol	40.37	56.77
Zm00001d019862_P001	Maize	cytosol	79.1	56.43
KRH12864	Soybean	cytosol, plasma membrane	36.89	55.38
AT5G60570.2	Thale cress	cytosol	44.47	55.22
CDX80156	Canola	cytosol	42.21	54.35
Bra002471.1-P	Field mustard	cytosol	41.6	54.13
CDY31534	Canola	cytosol	41.6	54.13
Zm00001d052253_P001	Maize	cytosol	41.39	47.75
Zm00001d048310_P001	Maize	cytosol	39.96	45.56
Zm00001d027856_P001	Maize	cytosol	39.14	44.52
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	39.34	43.34
Zm00001d033012_P001	Maize	cytosol	38.93	42.6
Zm00001d048898_P001	Maize	cytosol	37.7	42.3
Zm00001d007596_P001	Maize	nucleus, plastid	36.48	40.36
Zm00001d014338_P001	Maize	cytosol	15.16	21.26
Zm00001d016553_P001	Maize	cytosol	15.78	21.15
Zm00001d032991_P001	Maize	cytosol	18.65	20.82
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	17.83	19.82
Zm00001d015744_P001	Maize	plastid	16.6	19.38
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	17.21	18.42
Zm00001d049632_P001	Maize	cytosol	17.42	17.75
Zm00001d014986_P001	Maize	cytosol	12.7	17.08
Zm00001d018813_P001	Maize	mitochondrion	14.14	16.83
Zm00001d046922_P001	Maize	cytosol	11.89	15.06
Zm00001d046921_P001	Maize	cytosol	12.09	14.97

Protein Annotations

EnsemblPlants:Zm00001d002284_P003	EnsemblPlants:Zm00001d002284_T003	EnsemblPlantsGene:Zm00001d002284	EntrezGene:100274214	Gene3D:2.120.10.80	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413
PANTHER:PTHR24413:SF150	PFAM:PF01344	ProteinID:ONM13836.1	SEG:seg	SMART:SM00612	SUPFAM:SSF117281
UniParc:UPI0008447825	UniProt:A0A1D6DZ84	MapMan:35.1	:	:	:

Description

F-box/kelch-repeat protein

Coordinates

chr2:-:9548846..9551959

Molecular Weight (calculated)

54852.4 Da

IEP (calculated)

6.976

GRAVY (calculated)

-0.240

Length

488 amino acids

Sequence
(BLAST)

001: MQAAGASRWP GSRWRRVSAR SLPCSSILAA LAILIRQIME ELQDCNSRSL VALPGSLVLR LFRLFGQQDQ SSWQKYILAY FLLVRNEYFS GESKKHSDVF
101: CDISELDFFL YATDLDSEEL ELKEQKPITK AQSGGDSSGN RSNDCYFPGL HDDLSQDCLA WASRSDYPSL SCLNKRFNLL INSGYLYRLR RKYDIVEHWV
201: YLACSLMPWE AFDPSRKRWM RLPRMPCDEC FSCADKESLA VGTQLLVFGR EYTGLAIWMY NLLTRSWSPC TPMNLPRCLF ASGSSGEIAI VAGGCDKNGQ
301: VLRSAELYNS EIGHWETIPD MNLPRRLSSG FFMDGKFYVI GGVSSQRDSL TCGEEYNLET RTWRRILDMY PGGTSASQSP PLVAVVNNQL YAADQSTNVV
401: KKYDKANNAW NILKPLPVRA DSSNGWGLAF KACGDRLLVI GGHRGPRGEV ILLHSWCPEG GEDGADWEVL SVKERAGVFV YNCAIMGC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.