Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06854 | Sorghum | cytosol | 93.96 | 89.3 |
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 82.14 | 77.66 |
| TraesCS3D01G439000.1 | Wheat | cytosol | 81.59 | 77.34 |
| HORVU3Hr1G096780.1 | Barley | cytosol, plastid | 81.59 | 77.14 |
| TraesCS3B01G481500.1 | Wheat | cytosol, plastid | 81.32 | 77.08 |
| Os02t0504900-01 | Rice | cytosol | 81.32 | 76.88 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 65.93 | 62.5 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 64.84 | 61.78 |
| VIT_01s0010g03320.t01 | Wine grape | cytosol | 65.11 | 61.56 |
| KRG97442 | Soybean | cytosol, nucleus, peroxisome | 62.36 | 61.35 |
| KRH31463 | Soybean | cytosol | 62.36 | 58.96 |
| KRH42654 | Soybean | cytosol | 61.54 | 57.73 |
| CDY12647 | Canola | cytosol | 55.49 | 55.8 |
| Bra033998.1-P | Field mustard | cytosol | 55.49 | 55.8 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 59.34 | 55.38 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 55.49 | 53.72 |
| Bra004227.1-P | Field mustard | cytosol | 54.95 | 53.62 |
| CDX96091 | Canola | cytosol | 54.95 | 53.62 |
| CDY01812 | Canola | cytosol | 54.67 | 53.35 |
| CDY64883 | Canola | golgi, plastid | 56.04 | 49.63 |
| Zm00001d014338_P001 | Maize | cytosol | 24.45 | 25.57 |
| Zm00001d018813_P001 | Maize | mitochondrion | 25.27 | 22.44 |
| Zm00001d014986_P001 | Maize | cytosol | 21.7 | 21.76 |
| Zm00001d015744_P001 | Maize | plastid | 24.73 | 21.53 |
| Zm00001d032991_P001 | Maize | cytosol | 25.82 | 21.51 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 25.27 | 20.96 |
| Zm00001d050862_P001 | Maize | cytosol, peroxisome, plastid | 25.55 | 20.39 |
| Zm00001d046922_P001 | Maize | cytosol | 21.43 | 20.26 |
| Zm00001d046921_P001 | Maize | cytosol | 20.6 | 19.04 |
| Zm00001d049632_P001 | Maize | cytosol | 24.73 | 18.79 |
| Zm00001d026321_P001 | Maize | cytosol | 21.7 | 17.63 |
| Zm00001d052253_P001 | Maize | cytosol | 20.33 | 17.49 |
| Zm00001d027856_P001 | Maize | cytosol | 20.6 | 17.48 |
| Zm00001d048898_P001 | Maize | cytosol | 20.88 | 17.47 |
| Zm00001d048310_P001 | Maize | cytosol | 20.33 | 17.29 |
| Zm00001d007596_P001 | Maize | nucleus, plastid | 20.88 | 17.23 |
| Zm00001d033012_P001 | Maize | cytosol | 20.6 | 16.82 |
| Zm00001d014203_P001 | Maize | cytosol, nucleus, plastid | 20.33 | 16.7 |
| Zm00001d002284_P003 | Maize | mitochondrion | 21.15 | 15.78 |
| Zm00001d007538_P001 | Maize | cytosol | 9.89 | 12.12 |
| Zm00001d019862_P001 | Maize | cytosol | 20.05 | 10.67 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A096PXD0 | ProteinID:AQK71152.1 | ProteinID:AQK71153.1 | ProteinID:AQK71154.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| PFAM:PF01344 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI000220C3B2 |
| EnsemblPlantsGene:Zm00001d016553 | EnsemblPlants:Zm00001d016553_P001 | EnsemblPlants:Zm00001d016553_T001 | : | : | : |
Description
F-box/kelch-repeat protein
Coordinates
chr5:-:167128735..167131395
Molecular Weight (calculated)
40052.4 Da
IEP (calculated)
7.565
GRAVY (calculated)
-0.115
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLKPPARPK LYSGLMPQED LDPYRDLIPG LPEDLAKICL ALVPRAHFPA MGAVSKRWMS FLESKELVAV RKEVGKLEEW VYVLVPDAGA KGSHWEILEC
101: SGQKQSPLPR MPGLTKAGFG VVVIGGKLFV IAGYAADHGK DCASDEVYQY DSCLNRWTVL AKMNVARCDF ACAEVNGVIY VAGGFGPNGE SLSSVEVYDP
201: EQNKWTLIEG LRRPRWGCFG CSFEGKLYVM GGRSSFTIGN SRSVDVYNPN SHAWGQVKNG CVMVTAHAVL GKRLFCIEWK NQRSLAIFNP ADDSWQKVPV
301: PLTGSSSTRF SLVVHEDKLL LFPLEEEPGY QTLMYDPAAP MGSEWCTSKL KPTGSCLCSV TIKA
101: SGQKQSPLPR MPGLTKAGFG VVVIGGKLFV IAGYAADHGK DCASDEVYQY DSCLNRWTVL AKMNVARCDF ACAEVNGVIY VAGGFGPNGE SLSSVEVYDP
201: EQNKWTLIEG LRRPRWGCFG CSFEGKLYVM GGRSSFTIGN SRSVDVYNPN SHAWGQVKNG CVMVTAHAVL GKRLFCIEWK NQRSLAIFNP ADDSWQKVPV
301: PLTGSSSTRF SLVVHEDKLL LFPLEEEPGY QTLMYDPAAP MGSEWCTSKL KPTGSCLCSV TIKA
001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
Arabidopsis Description
F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.