CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97442	Soybean	cytosol, nucleus, peroxisome	78.09	81.89
KRH31463	Soybean	cytosol	81.19	81.82
VIT_01s0010g03320.t01	Wine grape	cytosol	78.87	79.48
Bra033998.1-P	Field mustard	cytosol	61.08	65.47
CDY12647	Canola	cytosol	60.82	65.19
Bra004227.1-P	Field mustard	cytosol	61.6	64.08
CDY01812	Canola	cytosol	61.6	64.08
Os02t0504900-01	Rice	cytosol	63.4	63.9
CDX96091	Canola	cytosol	61.34	63.81
GSMUA_Achr8P28270_001	Banana	cytosol	63.14	63.8
AT1G67480.1	Thale cress	cytosol, mitochondrion	60.31	62.23
EES06854	Sorghum	cytosol	60.82	61.62
Os04t0380300-01	Rice	plastid	59.54	61.6
Zm00001d016553_P001	Maize	cytosol	57.73	61.54
TraesCS3B01G481500.1	Wheat	cytosol, plastid	60.57	61.2
TraesCS3D01G439000.1	Wheat	cytosol	60.57	61.2
TraesCS3A01G446400.1	Wheat	cytosol, plastid	60.31	60.78
HORVU3Hr1G096780.1	Barley	cytosol, plastid	60.05	60.52
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	59.54	60.47
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	59.28	58.97
CDY64883	Canola	golgi, plastid	60.31	56.93
TraesCS2D01G279700.1	Wheat	mitochondrion	55.41	56.14
TraesCS2A01G280900.1	Wheat	mitochondrion	54.9	55.61
TraesCS2B01G298300.1	Wheat	mitochondrion	54.9	55.61
OQU81371	Sorghum	mitochondrion	53.35	54.91
HORVU2Hr1G068790.2	Barley	cytosol	52.32	52.86
KRH11716	Soybean	cytosol, golgi, plastid	23.71	24.73
KRH67237	Soybean	cytosol	21.65	24.35
KRG95556	Soybean	cytosol	21.39	24.06
KRH71403	Soybean	cytosol	20.88	23.55
KRH56558	Soybean	cytosol	25.77	23.36
KRG93237	Soybean	cytosol	25.77	23.36
KRH32035	Soybean	cytosol	20.62	23.26
KRH48156	Soybean	cytosol	21.39	22.93
KRH21075	Soybean	mitochondrion	23.45	22.47
KRH48154	Soybean	cytosol	21.13	22.28
KRH11179	Soybean	mitochondrion, plastid	23.2	22.22
KRH58897	Soybean	cytosol	24.74	21.97
KRH48153	Soybean	cytosol	20.36	21.82
KRH42810	Soybean	cytosol	24.48	21.74
KRH36711	Soybean	cytosol	22.42	21.59
KRH26429	Soybean	cytosol	20.1	21.43
KRH42190	Soybean	cytosol, plastid	26.55	21.41
KRG93186	Soybean	cytosol	21.91	21.36
KRH58301	Soybean	cytosol	26.03	21.0
KRH12864	Soybean	cytosol, plasma membrane	17.53	20.92
KRH65052	Soybean	cytosol	16.75	20.31
KRH18847	Soybean	cytosol	24.74	20.21
KRH24879	Soybean	cytosol	20.62	20.15
KRH65051	Soybean	cytosol	17.01	20.12
KRH29930	Soybean	cytosol	17.78	19.88
KRH22905	Soybean	cytosol	19.85	19.79
KRH61941	Soybean	plastid	17.78	19.66
KRH16647	Soybean	cytosol, plastid	23.97	19.5
KRH03453	Soybean	cytosol	20.36	19.36
KRH53131	Soybean	cytosol	23.45	19.12
KRH56929	Soybean	cytosol	19.85	18.92
KRH62415	Soybean	cytosol	13.14	18.48
KRH54527	Soybean	cytosol	20.88	18.37
KRH06951	Soybean	cytosol	19.07	18.32
KRG94518	Soybean	mitochondrion	18.81	18.2
KRH52601	Soybean	extracellular, golgi	18.56	18.05
KRH57678	Soybean	cytosol	18.3	18.02
KRH63378	Soybean	cytosol	20.36	17.91
KRH70694	Soybean	cytosol	21.91	15.77
KRH74828	Soybean	cytosol	21.65	15.64
KRH45883	Soybean	cytosol	21.65	15.58
KRG99114	Soybean	cytosol	21.39	15.4
KRH72270	Soybean	cytosol	5.15	15.27
KRH55297	Soybean	cytosol	9.28	12.29

Protein Annotations

EntrezGene:100815474	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02004822	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_08G103400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031463	UniProt:I1KS09
InterPro:IPR001810	InterPro:IPR015915	ProteinID:KRH42652.1	ProteinID:KRH42653.1	EnsemblPlants:KRH42654	ProteinID:KRH42654
ProteinID:KRH42654.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	InterPro:Kelch_2	PFAM:PF00646	PFAM:PF01344
PFAM:PF07646	PANTHER:PTHR24412	PANTHER:PTHR24412:SF377	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI0002338C81	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:7944809..7948802

Molecular Weight (calculated)

42923.3 Da

IEP (calculated)

6.693

GRAVY (calculated)

-0.189

Length

388 amino acids

Sequence
(BLAST)

001: MPSFVAEKKI FVEPNMCFTN LANHDRPTLT KNNHYVRSEA LDDDDDGTSP ILPGLPDDVS KHCLALVPRS NFPAMGGVCK RWRGFIRSKE FITVRKLAGM
101: HEEWLYILTA GSEGKGSHWE VMDCLGHNRR SLPPMPGPAK AGFGVVVLNG KLLVMAGYSS IDGTASVSAE VYQYDSCLNS WSRLSSMNVA RYDFACAEVD
201: GLVYAVGGYG ATGDSLSSAE VYDLDTDKWT PIESLRRPRW GCFACGFEGK LYVMGGRSSF TIGNSKFVDV YNPEKHGWCE MKNGCVMVTA YAVLEKKLFC
301: MEWKNQRKLA IFNPEDNSWK MVPVPLTGSS SIGFRFGILD GKLLLFSLEE EPSYKTLLYD PNAAPGSEWH TSDIRPSGLC LCSVTIKA

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.