CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48156	Soybean	cytosol	82.07	83.43
KRH65051	Soybean	cytosol	73.37	82.32
KRH65052	Soybean	cytosol	70.38	80.94
KRH48153	Soybean	cytosol	77.99	79.28
VIT_15s0046g02710.t01	Wine grape	cytosol	59.24	60.72
VIT_15s0046g02790.t01	Wine grape	cytosol	45.11	60.14
PGSC0003DMT400000478	Potato	nucleus	52.72	48.62
AT3G61350.2	Thale cress	cytosol	47.28	48.6
Solyc01g094520.2.1	Tomato	nucleus	52.17	48.12
CDY51562	Canola	cytosol	44.84	45.96
CDY58793	Canola	cytosol	44.84	45.96
Bra003447.1-P	Field mustard	cytosol	44.57	45.68
EES06149	Sorghum	cytosol	40.49	43.06
Os02t0114600-02	Rice	cytosol	40.76	41.67
HORVU6Hr1G007030.1	Barley	cytosol	38.86	41.33
Zm00001d014986_P001	Maize	cytosol	40.22	40.77
TraesCS6A01G037900.1	Wheat	cytosol	39.67	40.22
GSMUA_Achr4P20790_001	Banana	extracellular	39.95	38.99
TraesCS6D01G043400.1	Wheat	cytosol	39.4	37.96
TraesCS6B01G052900.2	Wheat	cytosol	37.77	36.39
KRH11179	Soybean	mitochondrion, plastid	26.36	23.95
KRH21075	Soybean	mitochondrion	25.82	23.46
KRG95556	Soybean	cytosol	21.47	22.9
KRH67237	Soybean	cytosol	20.92	22.32
KRH11716	Soybean	cytosol, golgi, plastid	22.28	22.04
KRH56558	Soybean	cytosol	25.0	21.5
KRG97442	Soybean	cytosol, nucleus, peroxisome	21.47	21.35
KRG93237	Soybean	cytosol	24.73	21.26
KRH42654	Soybean	cytosol	22.28	21.13
KRH58897	Soybean	cytosol	24.18	20.37
KRH32035	Soybean	cytosol	19.02	20.35
KRH71403	Soybean	cytosol	19.02	20.35
KRH42810	Soybean	cytosol	23.91	20.14
KRH31463	Soybean	cytosol	20.92	20.0
KRH36711	Soybean	cytosol	21.74	19.85
KRH26429	Soybean	cytosol	19.57	19.78
KRG93186	Soybean	cytosol	21.2	19.6
KRH42190	Soybean	cytosol, plastid	25.27	19.33
KRH22905	Soybean	cytosol	20.11	19.02
KRH61941	Soybean	plastid	17.93	18.8
KRH52601	Soybean	extracellular, golgi	20.11	18.55
KRH18847	Soybean	cytosol	23.91	18.53
KRH58301	Soybean	cytosol	24.18	18.5
KRH72270	Soybean	cytosol	6.52	18.32
KRH53131	Soybean	cytosol	23.64	18.28
KRH24879	Soybean	cytosol	19.57	18.14
KRH16647	Soybean	cytosol, plastid	23.37	18.03
KRH12864	Soybean	cytosol, plasma membrane	15.76	17.85
KRH03453	Soybean	cytosol	19.57	17.65
KRH29930	Soybean	cytosol	16.3	17.29
KRH62415	Soybean	cytosol	12.77	17.03
KRH56929	Soybean	cytosol	18.75	16.95
KRH63378	Soybean	cytosol	20.11	16.78
KRH54527	Soybean	cytosol	19.57	16.33
KRH57678	Soybean	cytosol	16.58	15.48
KRH06951	Soybean	cytosol	15.49	14.11
KRG94518	Soybean	mitochondrion	15.22	13.97
KRH70694	Soybean	cytosol	20.38	13.91
KRH74828	Soybean	cytosol	20.11	13.78
KRH45883	Soybean	cytosol	20.11	13.73
KRG99114	Soybean	cytosol	19.84	13.54
KRH55297	Soybean	cytosol	8.42	10.58

Protein Annotations

EntrezGene:100784812	Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A0R0J130	EMBL:ACUP02004208	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_07G071500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810
InterPro:IPR015915	EnsemblPlants:KRH48154	ProteinID:KRH48154	ProteinID:KRH48154.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24414	PANTHER:PTHR24414:SF40	SMART:SM00256	SMART:SM00612
SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0006ED651D	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:6507870..6509993

Molecular Weight (calculated)

41300.4 Da

IEP (calculated)

6.496

GRAVY (calculated)

-0.149

Length

368 amino acids

Sequence
(BLAST)

001: MSSVPFTMEH ADKGKESSNS INEVEVTNSP IICGLPDDIS LMCLARIPRK YHSVMKCVSK RWRNLICSEE WFCYRRKHKL DETWIYALCR DKSNEIFCYV
101: LDPTLSRRYW KLIDNLPPQI SKRKGIGFEA LGNKLFLLGG CSEFLDSTDE VYSYDASSNC WAQATSLSTA RYNFGCEVLD KKLYAIGGGG SKSSYHSWET
201: FDPLTNCWTS QTDPKIVNEI KDSVVLDGKI YVRCSRYPVT PHVFAVVYEP SSGTWEYADD DMVSGWTGPA VAVDGTLYVL DQSAGTKLMM WHKERREWIL
301: VGKLSPLPIR QPCQLVAVGK SIFVVGRVLS TVVVDVDNLG NEDQVIVGSA IPGLLFDVNV TSVKCLSN

Best Arabidopsis Sequence Match ( AT3G61350.1 )
(BLAST)

001: MACIVEDPQR AGQSNETQIA LISGVPDDIS KSCLARVPRE YHMAMKCVSR RWRDFVCSDE MCDYRNEFNL AESWIYALCR DISGGVFLHM LNPFSSRRSW
101: KRINDYPYIP MREGMGFAVL GKRLFVLGGC GWLEDATDEI YCYDAAMNTW FDVVPPLSTK RCYFACETLD GKIIAIGGLG LNPNAKRTWD IYDPLTRTCK
201: SCSDVNIVPE MEDSFVMDGR IYIRGGVGGS STAVYSASSG IWERMDDDMA SGWRGPAVVV AGDLYVLDQT FGAKLTMWCK DTRMWIHIGK LSQLVMKQPC
301: RLVSIGNSIF VIGKDCSTVV IDVENVRKNK MNGVMVCSSI PKTWDDDIDV ISCKSVAI

Arabidopsis Description

SKIP4F-box/kelch-repeat protein SKIP4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.