Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014986_P001 | Maize | cytosol | 89.88 | 85.67 |
| HORVU6Hr1G007030.1 | Barley | cytosol | 76.01 | 76.01 |
| Os02t0114600-02 | Rice | cytosol | 78.32 | 75.28 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 75.72 | 72.18 |
| TraesCS6D01G043400.1 | Wheat | cytosol | 75.43 | 68.32 |
| TraesCS6B01G052900.2 | Wheat | cytosol | 73.7 | 66.75 |
| GSMUA_Achr4P20790_001 | Banana | extracellular | 56.36 | 51.72 |
| VIT_15s0046g02710.t01 | Wine grape | cytosol | 46.53 | 44.85 |
| VIT_15s0046g02790.t01 | Wine grape | cytosol | 34.39 | 43.12 |
| KRH48153 | Soybean | cytosol | 44.8 | 42.82 |
| KRH48154 | Soybean | cytosol | 43.06 | 40.49 |
| KRH48156 | Soybean | cytosol | 41.91 | 40.06 |
| PGSC0003DMT400000478 | Potato | nucleus | 45.38 | 39.35 |
| Solyc01g094520.2.1 | Tomato | nucleus | 45.09 | 39.1 |
| KRH65052 | Soybean | cytosol | 36.13 | 39.06 |
| KRH65051 | Soybean | cytosol | 34.68 | 36.59 |
| CDY58793 | Canola | cytosol | 36.99 | 35.65 |
| AT3G61350.2 | Thale cress | cytosol | 36.42 | 35.2 |
| Bra003447.1-P | Field mustard | cytosol | 36.42 | 35.1 |
| CDY51562 | Canola | cytosol | 36.42 | 35.1 |
| OQU81371 | Sorghum | mitochondrion | 24.86 | 22.81 |
| OQU82118 | Sorghum | cytosol | 21.97 | 21.84 |
| EES06854 | Sorghum | cytosol | 23.12 | 20.89 |
| EER95442 | Sorghum | mitochondrion | 26.01 | 20.55 |
| EER91632 | Sorghum | plastid | 25.43 | 20.14 |
| EES05304 | Sorghum | cytosol, peroxisome, plastid | 25.43 | 19.17 |
| KXG29748 | Sorghum | plastid | 23.7 | 18.85 |
| KXG24326 | Sorghum | cytosol | 25.43 | 18.8 |
| EER97991 | Sorghum | mitochondrion | 21.39 | 17.87 |
| KXG27134 | Sorghum | cytosol | 13.29 | 17.1 |
| EER90147 | Sorghum | cytosol | 18.5 | 16.29 |
| OQU91835 | Sorghum | cytosol, nucleus, plastid | 20.23 | 15.77 |
| KXG40080 | Sorghum | cytosol | 19.36 | 15.65 |
| OQU83795 | Sorghum | cytosol | 19.94 | 15.47 |
| KXG30756 | Sorghum | cytosol | 18.79 | 15.29 |
| OQU82347 | Sorghum | mitochondrion | 18.5 | 13.56 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:8068217 | UniProt:C5XS99 | EnsemblPlants:EES06149 | ProteinID:EES06149 |
| ProteinID:EES06149.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009409 | GO:GO:0009628 | InterPro:IPR001810 | InterPro:IPR015915 |
| ProteinID:KXG29289.1 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 | PFAM:PF13964 |
| PANTHER:PTHR24414 | PANTHER:PTHR24414:SF40 | SMART:SM00256 | SMART:SM00612 | EnsemblPlantsGene:SORBI_3004G010900 | SUPFAM:SSF117281 |
| SUPFAM:SSF81383 | unigene:Sbi.780 | UniParc:UPI0001A85E8A | RefSeq:XP_002453173.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:-:914635..919385
Molecular Weight (calculated)
39051.3 Da
IEP (calculated)
6.985
GRAVY (calculated)
-0.096
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MELDPGHTPL IHGLPDEIAL ICLARVPRRY HNILRHVSKR WRALLCSEEW HLCRKRNNLD ESWIYVICRE AGIKCYVLAP DPSSRCFRIM HIIEPPCSGR
101: KGVTIEAIDK RLFLLGGCNC VHDATDEVYC YDASSNRWSA AAPMPTARCY FVSASLNEKL YVTGGYGLTD KSPNSWDIYD PATDSWCAHK NPMLTPDIVK
201: FVALDEELVT IHRAAWNRMY FAGIYDPLDR TWRGTENEIA LCCSSPTVVV DGTLYMLEQS MGTKLMRWQK DTKEWAMLGR LSDKVTRPPC ALVAIGRKIH
301: VIGRGLSIVT VDVDTAARVD GFLVTTSIGP LVEEDLTPER CMVITI
101: KGVTIEAIDK RLFLLGGCNC VHDATDEVYC YDASSNRWSA AAPMPTARCY FVSASLNEKL YVTGGYGLTD KSPNSWDIYD PATDSWCAHK NPMLTPDIVK
201: FVALDEELVT IHRAAWNRMY FAGIYDPLDR TWRGTENEIA LCCSSPTVVV DGTLYMLEQS MGTKLMRWQK DTKEWAMLGR LSDKVTRPPC ALVAIGRKIH
301: VIGRGLSIVT VDVDTAARVD GFLVTTSIGP LVEEDLTPER CMVITI
001: MACIVEDPQR AGQSNETQIA LISGVPDDIS KSCLARVPRE YHMAMKCVSR RWRDFVCSDE MCDYRNEFNL AESWIYALCR DISGGVFLHM LNPFSSRRSW
101: KRINDYPYIP MREGMGFAVL GKRLFVLGGC GWLEDATDEI YCYDAAMNTW FDVVPPLSTK RCYFACETLD GKIIAIGGLG LNPNAKRTWD IYDPLTRTCK
201: SCSDVNIVPE MEDSFVMDGR IYIRGGVGGS STAVYSASSG IWERMDDDMA SGWRGPAVVV AGDLYVLDQT FGAKLTMWCK DTRMWIHIGK LSQLVMKQPC
301: RLVSIGNSIF VIGKDCSTVV IDVENVRKNK MNGVMVCSSI PKTWDDDIDV ISCKSVAI
101: KRINDYPYIP MREGMGFAVL GKRLFVLGGC GWLEDATDEI YCYDAAMNTW FDVVPPLSTK RCYFACETLD GKIIAIGGLG LNPNAKRTWD IYDPLTRTCK
201: SCSDVNIVPE MEDSFVMDGR IYIRGGVGGS STAVYSASSG IWERMDDDMA SGWRGPAVVV AGDLYVLDQT FGAKLTMWCK DTRMWIHIGK LSQLVMKQPC
301: RLVSIGNSIF VIGKDCSTVV IDVENVRKNK MNGVMVCSSI PKTWDDDIDV ISCKSVAI
Arabidopsis Description
SKIP4F-box/kelch-repeat protein SKIP4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.