CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0380300-01	Rice	plastid	67.9	68.27
EES06854	Sorghum	cytosol	68.17	67.1
TraesCS2D01G279700.1	Wheat	mitochondrion	66.05	65.01
TraesCS2B01G298300.1	Wheat	mitochondrion	65.52	64.49
TraesCS2A01G280900.1	Wheat	mitochondrion	65.52	64.49
HORVU2Hr1G068790.2	Barley	cytosol	63.66	62.5
GSMUA_Achr8P28270_001	Banana	cytosol	58.89	57.81
VIT_01s0010g03320.t01	Wine grape	cytosol	56.76	55.58
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	55.7	54.97
KRG97442	Soybean	cytosol, nucleus, peroxisome	52.52	53.51
KRH42654	Soybean	cytosol	54.91	53.35
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	53.85	52.05
KRH31463	Soybean	cytosol	52.79	51.69
CDY12647	Canola	cytosol	48.54	50.55
Bra033998.1-P	Field mustard	cytosol	48.28	50.28
Bra004227.1-P	Field mustard	cytosol	48.28	48.79
CDX96091	Canola	cytosol	48.28	48.79
CDY01812	Canola	cytosol	47.75	48.26
AT1G67480.1	Thale cress	cytosol, mitochondrion	47.75	47.87
CDY64883	Canola	golgi, plastid	48.01	44.04
EES06149	Sorghum	cytosol	22.81	24.86
OQU82118	Sorghum	cytosol	21.49	23.28
EER95442	Sorghum	mitochondrion	24.67	21.23
EER91632	Sorghum	plastid	24.4	21.05
EER97991	Sorghum	mitochondrion	22.28	20.29
KXG29748	Sorghum	plastid	22.81	19.77
KXG27134	Sorghum	cytosol	14.06	19.7
EES05304	Sorghum	cytosol, peroxisome, plastid	22.02	18.08
KXG30756	Sorghum	cytosol	19.89	17.65
EER90147	Sorghum	cytosol	18.3	17.56
KXG24326	Sorghum	cytosol	20.95	16.88
OQU91835	Sorghum	cytosol, nucleus, plastid	19.63	16.67
KXG40080	Sorghum	cytosol	18.57	16.36
OQU82347	Sorghum	mitochondrion	20.16	16.1
OQU83795	Sorghum	cytosol	18.57	15.7

Protein Annotations

EnsemblPlants:OQU81371	EnsemblPlantsGene:SORBI_3006G048100	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24412	PANTHER:PTHR24412:SF377	PFAM:PF01344
ProteinID:OQU81371	ProteinID:OQU81371.1	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000B8B975F
UniProt:A0A1Z5RD08	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:33942055..33943303

Molecular Weight (calculated)

41871.7 Da

IEP (calculated)

9.211

GRAVY (calculated)

-0.139

Length

377 amino acids

Sequence
(BLAST)

001: MLALVGARAG PVHSQTCLGA TMRLMLPAEQ NVPSKTMTQM PNDYSYSSLI PGLPEDVAKI CLALVSRSYF PVMGAVSKRW MTFIGSREFI AVRKEVGKLE
101: EWIYVLTAEA GRKGRSCWEV LRSPDQKKRR LPPMPGPNKA GFGVVVLDGK LFVMAGYAAD HGKEFVSDEV YCYHACLNRW TALAKLNVAR HDFACAEVKG
201: VIYVAGGLGL AGVSLNSVEA YNPQQNKWTL IKSLRRPRWG CFGCGFSDKL YIMGGRSSFT IGNTRSVDVY EPDRHTWEEL KRGCVMVTSN AWKNQRSLAT
301: FNPADNSWQR ILLPHTGSSS TKFCLRVFGM KVLLFSLEEE PGYQTLMYDP AAPTGYEWQT TKLKPSGSCI CSVSIEV

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.