CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97442	Soybean	cytosol, nucleus, peroxisome	92.21	95.95
KRH42654	Soybean	cytosol	81.82	81.19
VIT_01s0010g03320.t01	Wine grape	cytosol	78.7	78.7
Bra033998.1-P	Field mustard	cytosol	61.56	65.47
CDY12647	Canola	cytosol	61.56	65.47
Bra004227.1-P	Field mustard	cytosol	61.82	63.81
CDY01812	Canola	cytosol	61.82	63.81
CDX96091	Canola	cytosol	61.56	63.54
AT1G67480.1	Thale cress	cytosol, mitochondrion	61.82	63.3
GSMUA_Achr8P28270_001	Banana	cytosol	62.6	62.76
Zm00001d016553_P001	Maize	cytosol	58.96	62.36
Os02t0504900-01	Rice	cytosol	62.08	62.08
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	61.3	61.78
EES06854	Sorghum	cytosol	60.78	61.1
TraesCS3D01G439000.1	Wheat	cytosol	60.78	60.94
TraesCS3B01G481500.1	Wheat	cytosol, plastid	60.52	60.68
Os04t0380300-01	Rice	plastid	58.96	60.53
HORVU3Hr1G096780.1	Barley	cytosol, plastid	60.26	60.26
TraesCS3A01G446400.1	Wheat	cytosol, plastid	59.74	59.74
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	60.26	59.49
CDY64883	Canola	golgi, plastid	61.04	57.18
TraesCS2D01G279700.1	Wheat	mitochondrion	52.99	53.26
TraesCS2B01G298300.1	Wheat	mitochondrion	52.99	53.26
TraesCS2A01G280900.1	Wheat	mitochondrion	52.73	53.0
OQU81371	Sorghum	mitochondrion	51.69	52.79
HORVU2Hr1G068790.2	Barley	cytosol	50.65	50.78
KRH11716	Soybean	cytosol, golgi, plastid	24.42	25.27
KRG95556	Soybean	cytosol	22.08	24.64
KRH67237	Soybean	cytosol	22.08	24.64
KRH71403	Soybean	cytosol	21.82	24.42
KRH32035	Soybean	cytosol	21.56	24.13
KRG93237	Soybean	cytosol	26.75	24.07
KRH56558	Soybean	cytosol	26.75	24.07
KRH26429	Soybean	cytosol	21.3	22.53
KRG93186	Soybean	cytosol	23.12	22.36
KRH58897	Soybean	cytosol	24.94	21.97
KRH36711	Soybean	cytosol	22.86	21.84
KRH42810	Soybean	cytosol	24.68	21.74
KRH42190	Soybean	cytosol, plastid	27.01	21.62
KRH48156	Soybean	cytosol	20.26	21.55
KRH21075	Soybean	mitochondrion	22.34	21.23
KRH22905	Soybean	cytosol	21.3	21.08
KRH11179	Soybean	mitochondrion, plastid	22.08	20.99
KRH48154	Soybean	cytosol	20.0	20.92
KRH58301	Soybean	cytosol	25.97	20.79
KRH48153	Soybean	cytosol	19.48	20.72
KRH12864	Soybean	cytosol, plasma membrane	17.14	20.31
KRH62415	Soybean	cytosol	14.55	20.29
KRH53131	Soybean	cytosol	24.94	20.17
KRH24879	Soybean	cytosol	20.78	20.15
KRH18847	Soybean	cytosol	24.68	20.0
KRH29930	Soybean	cytosol	17.92	19.88
KRH65051	Soybean	cytosol	16.88	19.82
KRH56929	Soybean	cytosol	20.78	19.66
KRH03453	Soybean	cytosol	20.78	19.61
KRH61941	Soybean	plastid	17.4	19.09
KRH65052	Soybean	cytosol	15.84	19.06
KRH52601	Soybean	extracellular, golgi	19.74	19.05
KRH16647	Soybean	cytosol, plastid	23.38	18.87
KRH54527	Soybean	cytosol	20.52	17.91
KRH06951	Soybean	cytosol	18.7	17.82
KRH57678	Soybean	cytosol	18.18	17.77
KRG94518	Soybean	mitochondrion	18.44	17.71
KRH63378	Soybean	cytosol	20.0	17.46
KRH45883	Soybean	cytosol	21.56	15.4
KRH72270	Soybean	cytosol	5.19	15.27
KRH70694	Soybean	cytosol	21.3	15.21
KRH74828	Soybean	cytosol	21.04	15.08
KRG99114	Soybean	cytosol	21.04	15.03
KRH55297	Soybean	cytosol	9.61	12.63

Protein Annotations

EntrezGene:100802912	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02007145	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_11G249300	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031463	InterPro:IPR001810
InterPro:IPR015915	UniProt:K7LS05	EnsemblPlants:KRH31463	ProteinID:KRH31463	ProteinID:KRH31463.1	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	InterPro:Kelch_2	PFAM:PF00646	PFAM:PF01344	PFAM:PF07646	PANTHER:PTHR24412
PANTHER:PTHR24412:SF377	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000233D84E	:

Description

hypothetical protein

Coordinates

chr11:-:34152675..34155963

Molecular Weight (calculated)

42790.6 Da

IEP (calculated)

6.480

GRAVY (calculated)

-0.034

Length

385 amino acids

Sequence
(BLAST)

001: MPGFTVGKKR FIQPNMCFTN LINQDKSTLS QNNHCLFPEA LNKDYSPILP GLPDDVAEYC LALVPRSNFP AMGGVCKIWR SFIQSKEFAT VRKLAGMLEE
101: WLYFLTTDCE GKESYWEVMD CLGHKCRSLP PMPGPGKAGF QVVVLNGKLL VMAGYSVIEG TAFASAEVYQ YDSCLNSWSR LSDMNVSRYD FACAEVNGLV
201: YAVGGYGVNG DSLSSAEVYD PDTDKWALIE SLRRPRWGCF ACGFEGKLYV MGGRSSFTIG NSKFVDIYNP ERHSWCEIKN GCVMVTAHAV LGKKLFCIEW
301: KNQRKLAIFS PEDNSWKMVP VPLTGSSSIG FRFGILDGKL LLFPLEAETA FQTLLYDPNA SLGSEWQTCD IRPSGLCLCC VTIKA

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.