Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G439000.1 | Wheat | cytosol | 96.88 | 97.14 |
| TraesCS3B01G481500.1 | Wheat | cytosol, plastid | 95.06 | 95.31 |
| HORVU3Hr1G096780.1 | Barley | cytosol, plastid | 94.29 | 94.29 |
| Zm00001d016553_P001 | Maize | cytosol | 77.66 | 82.14 |
| EES06854 | Sorghum | cytosol | 80.52 | 80.94 |
| Os02t0504900-01 | Rice | cytosol | 80.26 | 80.26 |
| TraesCS2A01G280900.1 | Wheat | mitochondrion | 67.01 | 67.36 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 63.38 | 63.54 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 62.08 | 62.57 |
| VIT_01s0010g03320.t01 | Wine grape | cytosol | 62.08 | 62.08 |
| KRG97442 | Soybean | cytosol, nucleus, peroxisome | 58.18 | 60.54 |
| KRH42654 | Soybean | cytosol | 60.78 | 60.31 |
| KRH31463 | Soybean | cytosol | 59.74 | 59.74 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 57.4 | 56.67 |
| CDY12647 | Canola | cytosol | 50.13 | 53.31 |
| Bra033998.1-P | Field mustard | cytosol | 50.13 | 53.31 |
| CDX96091 | Canola | cytosol | 50.91 | 52.55 |
| Bra004227.1-P | Field mustard | cytosol | 50.39 | 52.01 |
| CDY01812 | Canola | cytosol | 49.87 | 51.47 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 50.13 | 51.33 |
| CDY64883 | Canola | golgi, plastid | 50.39 | 47.2 |
| TraesCS6A01G211500.1 | Wheat | extracellular, golgi | 17.66 | 22.08 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 24.16 | 21.63 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 20.26 | 21.49 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 14.29 | 21.32 |
| TraesCS6A01G175700.1 | Wheat | plastid | 23.38 | 21.28 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 13.77 | 21.12 |
| TraesCS2A01G499700.1 | Wheat | cytosol, mitochondrion | 21.82 | 21.11 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 23.38 | 20.88 |
| TraesCS7A01G496600.1 | Wheat | cytosol | 20.52 | 20.52 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 23.38 | 19.65 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 22.6 | 19.08 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 18.7 | 18.7 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 18.44 | 18.64 |
| TraesCS5A01G544300.1 | Wheat | extracellular, plasma membrane | 13.77 | 18.53 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 18.18 | 18.52 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 17.4 | 18.41 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 20.0 | 17.87 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 19.48 | 17.65 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 20.0 | 17.15 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 16.88 | 13.71 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 18.18 | 13.31 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G446400.1 | EnsemblPlantsGene:TraesCS3A01G446400 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 | PFAM:PF01344 |
| SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:686784178..686785548
Molecular Weight (calculated)
42369.1 Da
IEP (calculated)
7.837
GRAVY (calculated)
-0.079
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTIVGTREQ FVQPQTFLRA TMQLKSPTRP KLSFCFTPQG DCDQYCALIP GLPEDLAKIC LALVPRTHFP VMGGVSKRWM SFLESKELIA VRKEVQKLDE
101: CVYVLTADAQ AKGSHWEVLG CQGQKNTPLP LMPGPTKAGF GVVVLDGKLI VIAGYAADHG KECVSDEVYQ YDCFLNRWTA LSKMNVARCD FACAEVNGVI
201: YVAGGFGPSG DSLSSVEVYD PEQNKWTLIG GLRRPRWGCF GCSFVGKMYV MGGRSSFTIG NSRYIDVYDT NSHAWGEFRN GCVMVTAHAV LGEKLFCIEW
301: KNQRSLAIFD PADNSWKKVP VPLTGSSSTR FSLGTHDGKL LLLSLEEEPG YQTLMYDPAA PTGSEWCTSK LRPSGRCLCS VTIKA
101: CVYVLTADAQ AKGSHWEVLG CQGQKNTPLP LMPGPTKAGF GVVVLDGKLI VIAGYAADHG KECVSDEVYQ YDCFLNRWTA LSKMNVARCD FACAEVNGVI
201: YVAGGFGPSG DSLSSVEVYD PEQNKWTLIG GLRRPRWGCF GCSFVGKMYV MGGRSSFTIG NSRYIDVYDT NSHAWGEFRN GCVMVTAHAV LGEKLFCIEW
301: KNQRSLAIFD PADNSWKKVP VPLTGSSSTR FSLGTHDGKL LLLSLEEEPG YQTLMYDPAA PTGSEWCTSK LRPSGRCLCS VTIKA
001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
Arabidopsis Description
F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.