Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G499800.1 | Wheat | mitochondrion | 95.23 | 93.58 |
| Os07t0153400-01 | Rice | mitochondrion | 83.42 | 81.77 |
| EER97991 | Sorghum | mitochondrion | 82.16 | 78.99 |
| Zm00001d018813_P001 | Maize | mitochondrion | 79.9 | 77.56 |
| GSMUA_Achr6P31190_001 | Banana | mitochondrion | 71.11 | 68.86 |
| PGSC0003DMT400008228 | Potato | cytosol, mitochondrion, peroxisome, plastid | 60.3 | 59.7 |
| Solyc02g021600.1.1 | Tomato | cytosol, mitochondrion, peroxisome, plastid | 60.05 | 59.45 |
| KRH11179 | Soybean | mitochondrion, plastid | 60.3 | 59.26 |
| KRH21075 | Soybean | mitochondrion | 60.3 | 59.26 |
| CDY26295 | Canola | mitochondrion, plastid | 56.78 | 56.78 |
| CDX99882 | Canola | mitochondrion, plastid | 56.53 | 56.53 |
| VIT_10s0003g03730.t01 | Wine grape | cytosol | 32.66 | 56.52 |
| Bra032358.1-P | Field mustard | mitochondrion, plastid | 56.28 | 56.28 |
| AT1G30090.1 | Thale cress | mitochondrion, plastid | 56.28 | 56.28 |
| TraesCS7A01G496600.1 | Wheat | cytosol | 33.67 | 34.81 |
| TraesCS5A01G544300.1 | Wheat | extracellular, plasma membrane | 24.87 | 34.62 |
| TraesCS6A01G175700.1 | Wheat | plastid | 29.65 | 27.9 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 25.63 | 23.72 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 26.38 | 22.93 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 26.13 | 22.81 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 24.37 | 22.51 |
| TraesCS2A01G280900.1 | Wheat | mitochondrion | 21.61 | 22.45 |
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 21.11 | 21.82 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 19.85 | 21.76 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 12.81 | 20.32 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 18.09 | 19.78 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 12.06 | 18.6 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 17.84 | 18.44 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 19.35 | 17.87 |
| TraesCS6A01G211500.1 | Wheat | extracellular, golgi | 13.32 | 17.21 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 17.84 | 16.71 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 15.58 | 16.4 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 15.58 | 16.27 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 16.58 | 14.7 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 16.08 | 13.5 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 16.83 | 12.74 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G499700.1 | EnsemblPlantsGene:TraesCS2A01G499700 | Gene3D:1.20.1280.50 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF27 | PFAM:PF00646 | PFAM:PF01344 | SEG:seg |
| SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2A:-:729175084..729176280
Molecular Weight (calculated)
44181.4 Da
IEP (calculated)
7.994
GRAVY (calculated)
-0.136
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRVRVSSHH SPVQKLGDSD MKLTPRFRLA GTTSPSSTEP EQQPPWETPL IPGLPDDAAL NCLLRLPVEA HGACRLVCRR WRHLLADKAR FFTHRKAMGL
101: RSPWLFTLAF HRCTGKIQWK VLDLDSLAWH AIPGMPCRDR ACPRGFGCIA VPGEDAAHLL VCGGLVSDMD CPLHLVLKYD VCKNRWTVVP RMLSARSFFA
201: GGVIDGRVYV AGGYSTDQFE LDSAEVLDPV NGVWQPIASM GANMASSDSA VVGGRLYVTE GCAWPFFSSP RGQVYDPKAD RWEAMPAGMR EGWTGLSVVI
301: DGRLFVISEY ERMKVKVYDP ETDSWDPVDG PPMPERIMKP LSVSCLESKI VVVGRGLHVV IGHVKKQSSC DYLVRWQDVE VPRAFSDLTP SSSQILHA
101: RSPWLFTLAF HRCTGKIQWK VLDLDSLAWH AIPGMPCRDR ACPRGFGCIA VPGEDAAHLL VCGGLVSDMD CPLHLVLKYD VCKNRWTVVP RMLSARSFFA
201: GGVIDGRVYV AGGYSTDQFE LDSAEVLDPV NGVWQPIASM GANMASSDSA VVGGRLYVTE GCAWPFFSSP RGQVYDPKAD RWEAMPAGMR EGWTGLSVVI
301: DGRLFVISEY ERMKVKVYDP ETDSWDPVDG PPMPERIMKP LSVSCLESKI VVVGRGLHVV IGHVKKQSSC DYLVRWQDVE VPRAFSDLTP SSSQILHA
001: MQRVRVSSQR AVVHKLGDSQ MTLSPKFRVA ASIQSTLFDR SSELELSLRG EPLIPGLPDD VALNCLLRVP VQSHVSSKSV CKRWHLLFGT KETFFAKRKE
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA
Arabidopsis Description
F-box/kelch-repeat protein At1g30090 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.