CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21075	Soybean	mitochondrion	96.54	96.54
VIT_10s0003g03730.t01	Wine grape	cytosol	42.47	74.78
PGSC0003DMT400008228	Potato	cytosol, mitochondrion, peroxisome, plastid	72.1	72.64
AT1G30090.1	Thale cress	mitochondrion, plastid	71.36	72.61
Solyc02g021600.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	71.6	72.14
CDX99882	Canola	mitochondrion, plastid	69.38	70.6
Bra032358.1-P	Field mustard	mitochondrion, plastid	69.14	70.35
CDY26295	Canola	mitochondrion, plastid	69.14	70.35
GSMUA_Achr6P31190_001	Banana	mitochondrion	64.2	63.26
Os07t0153400-01	Rice	mitochondrion	61.23	61.08
Zm00001d018813_P001	Maize	mitochondrion	61.23	60.49
EER97991	Sorghum	mitochondrion	61.73	60.39
TraesCS2A01G499700.1	Wheat	cytosol, mitochondrion	59.26	60.3
TraesCS2D01G499800.1	Wheat	mitochondrion	59.51	59.51
KRH61941	Soybean	plastid	28.4	32.76
KRH52601	Soybean	extracellular, golgi	30.86	31.33
KRH56558	Soybean	cytosol	28.4	26.87
KRH48154	Soybean	cytosol	23.95	26.36
KRH48156	Soybean	cytosol	23.46	26.24
KRG93237	Soybean	cytosol	27.65	26.17
KRH11716	Soybean	cytosol, golgi, plastid	23.95	26.08
KRH58897	Soybean	cytosol	27.16	25.17
KRH65052	Soybean	cytosol	19.75	25.0
KRH48153	Soybean	cytosol	22.22	24.86
KRH42810	Soybean	cytosol	26.67	24.71
KRH32035	Soybean	cytosol	20.74	24.42
KRH71403	Soybean	cytosol	20.74	24.42
KRG95556	Soybean	cytosol	20.74	24.35
KRH67237	Soybean	cytosol	20.49	24.06
KRG93186	Soybean	cytosol	23.46	23.87
KRG97442	Soybean	cytosol, nucleus, peroxisome	21.23	23.24
KRH42654	Soybean	cytosol	22.22	23.2
KRH65051	Soybean	cytosol	18.77	23.17
KRH36711	Soybean	cytosol	22.96	23.08
KRH72270	Soybean	cytosol	7.41	22.9
KRH26429	Soybean	cytosol	20.0	22.25
KRH31463	Soybean	cytosol	20.99	22.08
KRH12864	Soybean	cytosol, plasma membrane	17.53	21.85
KRH62415	Soybean	cytosol	14.57	21.38
KRH53131	Soybean	cytosol	24.94	21.22
KRH42190	Soybean	cytosol, plastid	25.19	21.21
KRH58301	Soybean	cytosol	25.19	21.21
KRH22905	Soybean	cytosol	20.0	20.82
KRH16647	Soybean	cytosol, plastid	24.44	20.75
KRH24879	Soybean	cytosol	20.25	20.65
KRH18847	Soybean	cytosol	24.2	20.63
KRH29930	Soybean	cytosol	17.53	20.46
KRH57678	Soybean	cytosol	19.01	19.54
KRH06951	Soybean	cytosol	18.02	18.07
KRG94518	Soybean	mitochondrion	17.53	17.71
KRH56929	Soybean	cytosol	16.54	16.46
KRH03453	Soybean	cytosol	16.54	16.42
KRH63378	Soybean	cytosol	17.53	16.1
KRH54527	Soybean	cytosol	17.53	16.1
KRH55297	Soybean	cytosol	9.63	13.31
KRH45883	Soybean	cytosol	17.53	13.17
KRH70694	Soybean	cytosol	17.04	12.8
KRG99114	Soybean	cytosol	17.04	12.8
KRH74828	Soybean	cytosol	16.79	12.66

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100804420	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02009186	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_15G093300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1MF25
InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH11179	ProteinID:KRH11179	ProteinID:KRH11179.1	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24411	PANTHER:PTHR24411:SF27	SMART:SM00256
SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000233B163	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:+:7239966..7242365

Molecular Weight (calculated)

45697.2 Da

IEP (calculated)

7.442

GRAVY (calculated)

-0.120

Length

405 amino acids

Sequence
(BLAST)

001: MQRVRFSSQQ APVHKLGDPQ MTLSPKFRLA VIQSSLANPS PELELSLREE PLIPGLPDDV ALNCLLRLPV QSHSSCRAVC KRWHMLLGNK ERFFTNRKQF
101: GLKDPWLFVF AYHKCTGKIK WQVLDLTHFS WHTIPAMPCK DKVCPHGFRC VSIPCDGTLF VCGGMVSDVD CPLDLVLKYE MQKNRWTVMN RMITARSFFA
201: SGVIDGMIYV AGGNSTDLYE LDSAEVLDPL NGSWRPIANM GTNMASYDAA VLNGKLLVTE GWLWPFYVSP RGQVYDPRTN NWENMAVGLR EGWTGSSVVV
301: YGHLFVVSEL ERMKLKVYDP ETDSWEAIEG LPLPEQIRKP FAVNACDCHI YVVGQNLVVG VGHITRLNPK ESCKEKWNFS VRWHVIDAPE SVSDLTPSSS
401: QVLFA

Best Arabidopsis Sequence Match ( AT1G30090.1 )
(BLAST)

001: MQRVRVSSQR AVVHKLGDSQ MTLSPKFRVA ASIQSTLFDR SSELELSLRG EPLIPGLPDD VALNCLLRVP VQSHVSSKSV CKRWHLLFGT KETFFAKRKE
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA

Arabidopsis Description

F-box/kelch-repeat protein At1g30090 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.