Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 1
- nucleus 1
- peroxisome 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400008228 | Potato | cytosol, mitochondrion, peroxisome, plastid | 98.01 | 98.01 |
| KRH21075 | Soybean | mitochondrion | 73.38 | 72.84 |
| KRH11179 | Soybean | mitochondrion, plastid | 72.14 | 71.6 |
| VIT_10s0003g03730.t01 | Wine grape | cytosol | 39.05 | 68.26 |
| AT1G30090.1 | Thale cress | mitochondrion, plastid | 64.93 | 65.58 |
| CDX99882 | Canola | mitochondrion, plastid | 64.43 | 65.08 |
| Bra032358.1-P | Field mustard | mitochondrion, plastid | 64.18 | 64.82 |
| CDY26295 | Canola | mitochondrion, plastid | 64.18 | 64.82 |
| GSMUA_Achr6P31190_001 | Banana | mitochondrion | 63.68 | 62.29 |
| Os07t0153400-01 | Rice | mitochondrion | 61.44 | 60.84 |
| Zm00001d018813_P001 | Maize | mitochondrion | 61.69 | 60.49 |
| TraesCS2A01G499700.1 | Wheat | cytosol, mitochondrion | 59.45 | 60.05 |
| TraesCS2D01G499800.1 | Wheat | mitochondrion | 60.45 | 60.0 |
| EER97991 | Sorghum | mitochondrion | 60.45 | 58.7 |
| Solyc07g042960.1.1 | Tomato | cytosol, mitochondrion | 12.19 | 27.84 |
| Solyc01g005970.2.1 | Tomato | cytosol | 28.11 | 25.86 |
| Solyc01g022740.2.1 | Tomato | cytosol | 27.61 | 25.4 |
| Solyc09g065400.1.1 | Tomato | cytosol | 20.4 | 23.77 |
| Solyc06g008690.1.1 | Tomato | cytosol | 19.9 | 23.19 |
| Solyc01g104980.2.1 | Tomato | cytosol, plastid | 26.62 | 22.53 |
| Solyc11g069320.1.1 | Tomato | plastid | 11.44 | 21.1 |
| Solyc01g094520.2.1 | Tomato | nucleus | 20.4 | 20.55 |
| Solyc04g005670.1.1 | Tomato | cytosol | 16.67 | 16.58 |
| Solyc03g113010.1.1 | Tomato | cytosol | 17.41 | 15.87 |
| Solyc07g042950.1.1 | Tomato | cytosol | 5.47 | 12.36 |
| Solyc07g009410.2.1 | Tomato | cytosol | 12.69 | 11.44 |
| Solyc04g005870.1.1 | Tomato | cytosol | 1.49 | 11.32 |
| Solyc05g007220.2.1 | Tomato | nucleus | 16.92 | 10.56 |
Protein Annotations
| Gene3D:1.20.1280.50 | Gene3D:2.120.10.80 | MapMan:35.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR015915 | UniProt:K4B508 | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 | PFscan:PS50181 | PANTHER:PTHR24411 | PANTHER:PTHR24411:SF27 |
| SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | EnsemblPlantsGene:Solyc02g021600.1 | EnsemblPlants:Solyc02g021600.1.1 |
| UniParc:UPI00027689E0 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:23251941..23253149
Molecular Weight (calculated)
45484.7 Da
IEP (calculated)
7.799
GRAVY (calculated)
-0.127
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRVRVSSHQ APVQRLGDSQ MTLSPKFRLA AKQSDLLDPS FDLEMWRKGE PLIPGLPDDV ALNCLLRIPV NDHMNCRVVC KRWYSLFATK DRFFSRRKEL
101: GFHDPWLFVF AFHKTSGKIQ WKVFDLKNSS WHTIPAMPCK EKVCPHGFRC ICFPHDGVLY VCGGVASDVD CPLNLVVKYE VRRNRWTVMK KMITARSFFA
201: SGVIDGMIYV AGGNSTHLFE LDSAEVLDPD EGIWCPVANM GTNMASYDSA VLNGKLLVTE GWFWPFYVVP RGQIYDPQTG NWENMASGLR EGWTGSSVVL
301: YGRLFVVSEH ERTKLKVYEP ENDSWDTVEG LPLPEQICKP FSVDCCDNRI VVVGRNLHVA IGHIKSLQPS SKRCSFAVYW QVVDAPASLS DFTPSSAQVL
401: FA
101: GFHDPWLFVF AFHKTSGKIQ WKVFDLKNSS WHTIPAMPCK EKVCPHGFRC ICFPHDGVLY VCGGVASDVD CPLNLVVKYE VRRNRWTVMK KMITARSFFA
201: SGVIDGMIYV AGGNSTHLFE LDSAEVLDPD EGIWCPVANM GTNMASYDSA VLNGKLLVTE GWFWPFYVVP RGQIYDPQTG NWENMASGLR EGWTGSSVVL
301: YGRLFVVSEH ERTKLKVYEP ENDSWDTVEG LPLPEQICKP FSVDCCDNRI VVVGRNLHVA IGHIKSLQPS SKRCSFAVYW QVVDAPASLS DFTPSSAQVL
401: FA
001: MQRVRVSSQR AVVHKLGDSQ MTLSPKFRVA ASIQSTLFDR SSELELSLRG EPLIPGLPDD VALNCLLRVP VQSHVSSKSV CKRWHLLFGT KETFFAKRKE
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA
Arabidopsis Description
F-box/kelch-repeat protein At1g30090 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z0]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.