Factsheet for Bra032358.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99882	Canola	mitochondrion, plastid	99.25	99.25
CDY26295	Canola	mitochondrion, plastid	99.25	99.25
AT1G30090.1	Thale cress	mitochondrion, plastid	90.95	90.95
KRH11179	Soybean	mitochondrion, plastid	70.35	69.14
KRH21075	Soybean	mitochondrion	70.35	69.14
PGSC0003DMT400008228	Potato	cytosol, mitochondrion, peroxisome, plastid	65.08	64.43
Solyc02g021600.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	64.82	64.18
VIT_10s0003g03730.t01	Wine grape	cytosol	36.68	63.48
Os07t0153400-01	Rice	mitochondrion	59.55	58.37
TraesCS2A01G499700.1	Wheat	cytosol, mitochondrion	56.28	56.28
Zm00001d018813_P001	Maize	mitochondrion	57.79	56.1
TraesCS2D01G499800.1	Wheat	mitochondrion	56.78	55.8
EER97991	Sorghum	mitochondrion	58.04	55.8
GSMUA_Achr6P31190_001	Banana	mitochondrion	57.54	55.72
Bra007843.1-P	Field mustard	cytosol	34.17	36.56
Bra011908.1-P	Field mustard	mitochondrion	26.88	24.6
Bra033998.1-P	Field mustard	cytosol	22.11	24.31
Bra026073.1-P	Field mustard	cytosol	12.56	24.15
Bra037989.1-P	Field mustard	cytosol, plastid	26.38	24.14
Bra004227.1-P	Field mustard	cytosol	22.61	24.13
Bra001739.1-P	Field mustard	cytosol	20.85	23.99
Bra030872.1-P	Field mustard	cytosol	25.88	23.68
Bra005497.1-P	Field mustard	cytosol	8.29	22.92
Bra037535.1-P	Field mustard	cytosol	19.85	22.77
Bra010942.1-P	Field mustard	plastid	19.1	22.03
Bra002471.1-P	Field mustard	cytosol	20.6	21.87
Bra003447.1-P	Field mustard	cytosol	18.34	20.33
Bra012304.1-P	Field mustard	cytosol	23.62	20.13
Bra030046.1-P	Field mustard	cytosol, plastid	17.59	19.83
Bra031360.1-P	Field mustard	plastid	11.06	18.03
Bra015905.1-P	Field mustard	cytosol	17.84	17.23
Bra026838.1-P	Field mustard	nucleus	17.59	17.2
Bra016297.1-P	Field mustard	cytosol	18.34	17.14
Bra032052.1-P	Field mustard	cytosol	7.54	17.05
Bra017407.1-P	Field mustard	nucleus, plastid	18.59	16.86
Bra008155.1-P	Field mustard	cytosol	12.56	16.84
Bra032983.1-P	Field mustard	cytosol	17.34	16.79
Bra025251.1-P	Field mustard	cytosol	18.09	16.63
Bra026575.1-P	Field mustard	nucleus	18.34	16.44
Bra003796.1-P	Field mustard	cytosol	17.34	16.16
Bra034944.1-P	Field mustard	cytosol	16.58	16.14
Bra010784.1-P	Field mustard	cytosol	15.83	15.87
Bra024801.1-P	Field mustard	nucleus	17.84	15.67
Bra030045.1-P	Field mustard	cytosol	18.09	15.29

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra032358	EnsemblPlants:Bra032358.1	EnsemblPlants:Bra032358.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4EU76	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24411
PANTHER:PTHR24411:SF27	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00025425CD

Description

AT1G30090 (E=8e-221) | kelch repeat-containing F-box family protein

Coordinates

chrA09:+:22239579..22240775

Molecular Weight (calculated)

45060.2 Da

IEP (calculated)

7.673

GRAVY (calculated)

-0.168

Length

398 amino acids

Sequence
(BLAST)

001: MQRVRVSSQR AAVHKLGDSQ MTLSPKFRVA ASVQSPLFDR SSEQELSLTG EPLIPGLPDD VALNCLLRVP VESHVSSRSV CKRWHFLFCA KETFFARRKE
101: FGFKEPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPSEGTM FVCGGMVSDS DCPLDLVLKY DMVRNHWTVT NKMITPRSFF
201: GSGVIDGNIY AAGGNSADMF ELDTAEVLNP LDGKWRSVSN MVTQMASYDA AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMAMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD SVTDSWETVN GPELPEKICR PFAVNCYGNR VYVVGRNLHL AVGSIWRSES KFGVRWEVVE SPERYGDLTP SNSQILFA

Best Arabidopsis Sequence Match ( AT1G30090.1 )
(BLAST)

001: MQRVRVSSQR AVVHKLGDSQ MTLSPKFRVA ASIQSTLFDR SSELELSLRG EPLIPGLPDD VALNCLLRVP VQSHVSSKSV CKRWHLLFGT KETFFAKRKE
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA

Arabidopsis Description

F-box/kelch-repeat protein At1g30090 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z0]
SUBAcon: [plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.