Factsheet for Zm00001d018813_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97991	Sorghum	mitochondrion	81.95	81.16
TraesCS2D01G499800.1	Wheat	mitochondrion	79.27	80.25
TraesCS2A01G499700.1	Wheat	cytosol, mitochondrion	77.56	79.9
Os07t0153400-01	Rice	mitochondrion	77.56	78.33
GSMUA_Achr6P31190_001	Banana	mitochondrion	69.51	69.34
PGSC0003DMT400008228	Potato	cytosol, mitochondrion, peroxisome, plastid	60.73	61.94
Solyc02g021600.1.1	Tomato	cytosol, mitochondrion, peroxisome, plastid	60.49	61.69
KRH11179	Soybean	mitochondrion, plastid	60.49	61.23
KRH21075	Soybean	mitochondrion	60.24	60.99
CDY26295	Canola	mitochondrion, plastid	56.59	58.29
VIT_10s0003g03730.t01	Wine grape	cytosol	32.68	58.26
CDX99882	Canola	mitochondrion, plastid	56.34	58.04
Bra032358.1-P	Field mustard	mitochondrion, plastid	56.1	57.79
AT1G30090.1	Thale cress	mitochondrion, plastid	55.61	57.29
Zm00001d046922_P001	Maize	cytosol	34.88	37.14
Zm00001d046921_P001	Maize	cytosol	35.12	36.55
Zm00001d015744_P001	Maize	plastid	31.71	31.1
Zm00001d016553_P001	Maize	cytosol	22.44	25.27
Zm00001d014338_P001	Maize	cytosol	21.22	25.0
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	26.34	23.68
Zm00001d032991_P001	Maize	cytosol	24.63	23.11
Zm00001d049632_P001	Maize	cytosol	26.83	22.96
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	23.9	22.32
Zm00001d014986_P001	Maize	cytosol	19.02	21.49
Zm00001d014203_P001	Maize	cytosol, nucleus, plastid	20.0	18.51
Zm00001d033012_P001	Maize	cytosol	19.51	17.94
Zm00001d048310_P001	Maize	cytosol	18.54	17.76
Zm00001d027856_P001	Maize	cytosol	18.54	17.72
Zm00001d052253_P001	Maize	cytosol	18.05	17.49
Zm00001d048898_P001	Maize	cytosol	18.54	17.47
Zm00001d007596_P001	Maize	nucleus, plastid	18.29	17.01
Zm00001d026321_P001	Maize	cytosol	18.05	16.52
Zm00001d002284_P003	Maize	mitochondrion	16.83	14.14
Zm00001d007538_P001	Maize	cytosol	9.02	12.46
Zm00001d019862_P001	Maize	cytosol	15.85	9.5

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:107275234	Gene3D:2.120.10.80	MapMan:35.1	EMBL:BT063012	UniProt:C0P3Z3
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ProteinID:ONM51385.1	PFAM:PF00646	PFAM:PF01344
PANTHER:PTHR24411	PANTHER:PTHR24411:SF27	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI000194903F	EnsemblPlantsGene:Zm00001d018813	EnsemblPlants:Zm00001d018813_P001	EnsemblPlants:Zm00001d018813_T001	SEG:seg	:

Description

F-box/kelch-repeat protein

Coordinates

chr7:-:5921819..5923051

Molecular Weight (calculated)

44305.3 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.041

Length

410 amino acids

Sequence
(BLAST)

001: MRRVRVSSHQ APVHKLGDGQ MKLTPRFRLA ATPASSSGPQ QASWEAAEAL IPGLPDDAAL NCLLRLAVES HGACRLVCRR WRHLLADKAR FFAQRRALGL
101: RAPWLFTLAF HRCTGEIQWK VLDLGQRSWH AIPAMPCRDR ACPRGFGCVA VPAAGDGGDA LVVCGGLVSD MDCPLHLVLR YDVCRNRWAV MARMLAARSF
201: FAGGVIDGRV YVAGGYSADQ FELSSAEVLD PAGAGAWRPV ASMGANMASA DSAVLGGRLY VTEGCAWPFF SAPRGQVYDP RADRWEAMPA GMREGWTGLS
301: VVVAGRLFVV SEYERMKVKV YDPETDSWDT VGGAPMPERI MKPFSVSCVD SRIVVVGRGL HVAIGHVREE PAGGGPGSRG APGYSVCWQD VDAPKEFSDL
401: TPSSSQILHA

Best Arabidopsis Sequence Match ( AT1G30090.1 )
(BLAST)

001: MQRVRVSSQR AVVHKLGDSQ MTLSPKFRVA ASIQSTLFDR SSELELSLRG EPLIPGLPDD VALNCLLRVP VQSHVSSKSV CKRWHLLFGT KETFFAKRKE
101: FGFKDPWLFV VGFSRCTGKI QWKVLDLRNL TWHEIPAMPC RDKVCPHGFR SVSMPREGTM FVCGGMVSDS DCPLDLVLKY DMVKNHWTVT NKMITARSFF
201: ASGVIDGMIY AAGGNAADLY ELDCAEVLNP LDGNWRPVSN MVAHMASYDT AVLNGKLLVT EGWLWPFFVS PRGQVYDPRT DQWETMSMGL REGWTGTSVV
301: IYDRLFIVSE LERMKMKVYD PVTDSWETIN GPELPEQICR PFAVNCYGNR VYVVGRNLHL AVGNIWQSEN KFAVRWEVVE SPERYADITP SNSQILFA

Arabidopsis Description

F-box/kelch-repeat protein At1g30090 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6Z0]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.