Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g069320.1.1 | Tomato | plastid | 33.0 | 44.95 |
| Zm00001d026321_P001 | Maize | cytosol | 58.59 | 38.84 |
| OQU82347 | Sorghum | mitochondrion | 60.27 | 37.92 |
| TraesCS2D01G463000.1 | Wheat | cytosol | 56.57 | 37.58 |
| TraesCS2B01G484200.1 | Wheat | cytosol | 56.57 | 37.42 |
| GSMUA_Achr9P30470_001 | Banana | cytosol | 49.16 | 37.34 |
| Zm00001d002284_P003 | Maize | mitochondrion | 61.28 | 37.3 |
| VIT_16s0039g01470.t01 | Wine grape | cytosol | 48.15 | 37.24 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 55.89 | 36.97 |
| HORVU2Hr1G103880.2 | Barley | cytosol | 55.22 | 36.77 |
| Os04t0619300-01 | Rice | cytosol, extracellular | 58.25 | 36.34 |
| GSMUA_Achr3P23350_001 | Banana | cytosol, extracellular | 48.82 | 35.98 |
| KRH29930 | Soybean | cytosol | 41.75 | 35.73 |
| KRH26429 | Soybean | cytosol | 42.09 | 34.34 |
| KRH22905 | Soybean | cytosol | 42.09 | 32.13 |
| PGSC0003DMT400020936 | Potato | cytosol | 41.75 | 31.96 |
| KRH24879 | Soybean | cytosol | 41.75 | 31.23 |
| GSMUA_Achr11P... | Banana | cytosol | 46.13 | 31.14 |
| Bra002471.1-P | Field mustard | cytosol | 38.05 | 30.13 |
| CDY31534 | Canola | cytosol | 38.05 | 30.13 |
| CDX80156 | Canola | cytosol | 38.38 | 30.08 |
| KRH12864 | Soybean | cytosol, plasma membrane | 32.66 | 29.85 |
| AT5G60570.2 | Thale cress | cytosol | 39.39 | 29.77 |
| Zm00001d019862_P001 | Maize | cytosol | 59.6 | 25.88 |
| Zm00001d052253_P001 | Maize | cytosol | 34.68 | 24.35 |
| Zm00001d048310_P001 | Maize | cytosol | 33.33 | 23.13 |
| Zm00001d014203_P001 | Maize | cytosol, nucleus, plastid | 34.34 | 23.02 |
| Zm00001d048898_P001 | Maize | cytosol | 33.67 | 22.99 |
| Zm00001d027856_P001 | Maize | cytosol | 33.0 | 22.84 |
| Zm00001d033012_P001 | Maize | cytosol | 34.01 | 22.65 |
| Zm00001d007596_P001 | Maize | nucleus, plastid | 32.66 | 22.0 |
| Zm00001d014338_P001 | Maize | cytosol | 12.46 | 10.63 |
| Zm00001d032991_P001 | Maize | cytosol | 15.15 | 10.3 |
| Zm00001d015744_P001 | Maize | plastid | 14.14 | 10.05 |
| Zm00001d014986_P001 | Maize | cytosol | 12.12 | 9.92 |
| Zm00001d016553_P001 | Maize | cytosol | 12.12 | 9.89 |
| Zm00001d049632_P001 | Maize | cytosol | 15.49 | 9.6 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 14.14 | 9.57 |
| Zm00001d018813_P001 | Maize | mitochondrion | 12.46 | 9.02 |
| Zm00001d050862_P001 | Maize | cytosol, peroxisome, plastid | 13.47 | 8.77 |
| Zm00001d046921_P001 | Maize | cytosol | 11.45 | 8.63 |
| Zm00001d046922_P001 | Maize | cytosol | 10.77 | 8.31 |
Protein Annotations
| EnsemblPlants:Zm00001d007538_P001 | EnsemblPlants:Zm00001d007538_T001 | EnsemblPlantsGene:Zm00001d007538 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF150 |
| PFAM:PF01344 | ProteinID:ONM27071.1 | SEG:seg | SUPFAM:SSF117281 | UniParc:UPI0008447DC9 | UniProt:A0A1D6F755 |
| MapMan:35.1 | : | : | : | : | : |
Description
F-box/kelch-repeat protein
Coordinates
chr2:+:234266504..234268032
Molecular Weight (calculated)
33421.5 Da
IEP (calculated)
4.992
GRAVY (calculated)
-0.198
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCDECFSCA DKESLAVGTQ LLVFGREYTG LAIWMYNLLT RSWSPCTPMN LPRCLFASGS SGEIAIVAGG CDKNGQVLSQ RDSLTCGEEY NLETRTWRRI
101: FDMYPGGTSA SQSPPFVAVV NNQLYAADQS TNVVKKYYKA NNAWNILKPL SVRADSSNGW GLAFKACGNR LLRSWASSNS SGIMEELQDC NSRSLVALLG
201: SLLLHLFRLF GQQDQSSWQK YIYTYFLLVR NDYFSGESKK HSDVFCDISE LDFFPYATYL DSEELELKEH VEYLPGARLA PIDGLRYTEC TLNLFQI
101: FDMYPGGTSA SQSPPFVAVV NNQLYAADQS TNVVKKYYKA NNAWNILKPL SVRADSSNGW GLAFKACGNR LLRSWASSNS SGIMEELQDC NSRSLVALLG
201: SLLLHLFRLF GQQDQSSWQK YIYTYFLLVR NDYFSGESKK HSDVFCDISE LDFFPYATYL DSEELELKEH VEYLPGARLA PIDGLRYTEC TLNLFQI
001: MFEGRPRDSC LVSTLFTMPS HKETKWSFLV SGKRSFLNND ESDLHFKKMY KLTTDSSEGE DNGSSSDSGT LIPGMNRDDS LSCLIRCSRA DYCSIASVNR
101: SLRSLIRSGE IYRLRRLQGT LEHWVYFSCH LNEWEAFDPR SKRWMHLPSM PQNECFRYAD KESLAVGTDL LVFGWEVSSY VIYRYSLLTN SWSTAKSMNM
201: PRCLFGSASY GEIAVLAGGC DSSGRILDTA ELYNYEDQTW LVLPGMNKRR KMCSGVFMDG KFYVIGGIGV GEENEPKVLT CGEEFDLKTR KWTEIPEMSP
301: PRSNQGNGMS AAAMAPPLVA VVNDQLYAAD HAGMAVRRYD KEKRVWNKVG NLPEQAGSMN GWGLAFRACG DRIIVIGGPK APGEGFIELN SWVPSVTTPE
401: WHLLGKKQSV NFVYNCAVMS C
101: SLRSLIRSGE IYRLRRLQGT LEHWVYFSCH LNEWEAFDPR SKRWMHLPSM PQNECFRYAD KESLAVGTDL LVFGWEVSSY VIYRYSLLTN SWSTAKSMNM
201: PRCLFGSASY GEIAVLAGGC DSSGRILDTA ELYNYEDQTW LVLPGMNKRR KMCSGVFMDG KFYVIGGIGV GEENEPKVLT CGEEFDLKTR KWTEIPEMSP
301: PRSNQGNGMS AAAMAPPLVA VVNDQLYAAD HAGMAVRRYD KEKRVWNKVG NLPEQAGSMN GWGLAFRACG DRIIVIGGPK APGEGFIELN SWVPSVTTPE
401: WHLLGKKQSV NFVYNCAVMS C
Arabidopsis Description
F-box/kelch-repeat protein At1g26930 [Source:UniProtKB/Swiss-Prot;Acc:Q84M94]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.