Factsheet for TraesCS2D01G463000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G462600.1	Wheat	cytosol	97.99	97.55
TraesCS2B01G484200.1	Wheat	cytosol	96.87	96.44
HORVU2Hr1G103880.2	Barley	cytosol	93.74	93.95
KXG27134	Sorghum	cytosol	53.47	88.85
Zm00001d026321_P001	Maize	cytosol	81.66	81.47
Os04t0619300-01	Rice	cytosol, extracellular	85.68	80.46
OQU82347	Sorghum	mitochondrion	83.89	79.45
Zm00001d002284_P003	Maize	mitochondrion	83.45	76.43
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	62.64	69.48
VIT_16s0039g01470.t01	Wine grape	cytosol	58.84	68.49
GSMUA_Achr9P30470_001	Banana	cytosol	58.17	66.5
Solyc11g069320.1.1	Tomato	plastid	32.21	66.06
KRH26429	Soybean	cytosol	50.11	61.54
KRH22905	Soybean	cytosol	50.56	58.1
PGSC0003DMT400020936	Potato	cytosol	50.34	57.99
GSMUA_Achr11P...	Banana	cytosol	56.82	57.73
Zm00001d007538_P001	Maize	cytosol	37.58	56.57
KRH29930	Soybean	cytosol	43.62	56.2
KRH24879	Soybean	cytosol	49.66	55.92
AT5G60570.2	Thale cress	cytosol	48.55	55.22
CDX80156	Canola	cytosol	46.53	54.88
CDY31534	Canola	cytosol	45.86	54.67
Bra002471.1-P	Field mustard	cytosol	45.86	54.67
TraesCS4D01G286700.1	Wheat	cytosol	39.37	53.33
KRH12864	Soybean	cytosol, plasma membrane	38.26	52.62
TraesCS7D01G005100.1	Wheat	cytosol	23.71	49.3
Zm00001d019862_P001	Maize	cytosol	73.38	47.95
TraesCS6D01G285100.1	Wheat	cytosol, nucleus, plastid	44.97	47.29
TraesCS7D01G007100.1	Wheat	cytosol	36.91	44.35
TraesCS3D01G540000.1	Wheat	cytosol	21.7	22.72
TraesCS4D01G282200.1	Wheat	cytosol	20.36	21.82
TraesCS6D01G195800.1	Wheat	cytosol	17.23	21.81
TraesCS3D01G439000.1	Wheat	cytosol	17.45	20.31
TraesCS6D01G167900.1	Wheat	plastid	18.57	19.62
TraesCS1D01G136700.1	Wheat	nucleus	20.36	19.49
TraesCS2D01G279700.1	Wheat	mitochondrion	16.55	19.32
TraesCS7D01G016400.1	Wheat	cytosol, plastid	18.12	17.76
TraesCS2D01G499800.1	Wheat	mitochondrion	15.66	17.28
TraesCS6D01G043400.1	Wheat	cytosol	14.54	17.02
TraesCS7D01G483900.1	Wheat	cytosol	12.53	14.62

Protein Annotations

EnsemblPlants:TraesCS2D01G463000.1	EnsemblPlantsGene:TraesCS2D01G463000	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF150	PFAM:PF01344
SEG:seg	SMART:SM00612	SUPFAM:SSF117281	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:+:568940188..568941531

Molecular Weight (calculated)

49726.9 Da

IEP (calculated)

6.928

GRAVY (calculated)

-0.286

Length

447 amino acids

Sequence
(BLAST)

001: MEDFQDCNSK SLVAVPGSLV LHLFRLLGQQ DNSWQKYALA YFLLVRNEYF PREPRKSSAV NGQLVPCCHG SDLGSNELEV EKQNAVVKSQ SGGDSSSNGS
101: NDCFLPGLHD DLAQDCLAWT SRSDYPSLSC LNKKFNTLVN GGYLYKLRRK YGIVEHWVYL ACSAMPWEAF DPSRNRWMRL PRMPCDDCFS CADKESLAVG
201: TQLLVFGREY TGLAIWMYNL LTRHWSRCTP MNFPRCLFAS GSSGEIAIVA GGCDRNGQVL RSVELYNSEA GQWETLPDMN LPRRLSSGFF MDGKFYVIGG
301: VTSERHSLTC GEEFDLDTRT WRRIHDMYPG GTSASQSPPL VAVVNNQLYA ADQSTNVVKK YDKASNTWNI VKPLPVRADS SNGWGLAFKG CGDRLLVIGG
401: HRGARGEVIL LHSWCPEDGN GAASDWEVLS VKERAGVFVY NCAIMGC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.