CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27134	Sorghum	cytosol	55.72	97.77
Zm00001d002284_P003	Maize	mitochondrion	96.82	93.65
TraesCS2A01G462600.1	Wheat	cytosol	80.3	84.41
TraesCS2B01G484200.1	Wheat	cytosol	79.87	83.96
TraesCS2D01G463000.1	Wheat	cytosol	79.45	83.89
HORVU2Hr1G103880.2	Barley	cytosol	79.03	83.63
Os04t0619300-01	Rice	cytosol, extracellular	83.9	83.19
GSMUA_Achr3P23350_001	Banana	cytosol, extracellular	60.59	70.97
VIT_16s0039g01470.t01	Wine grape	cytosol	57.2	70.31
GSMUA_Achr9P30470_001	Banana	cytosol	56.78	68.54
Solyc11g069320.1.1	Tomato	plastid	30.3	65.6
KRH26429	Soybean	cytosol	47.46	61.54
Zm00001d007538_P001	Maize	cytosol	37.92	60.27
GSMUA_Achr11P...	Banana	cytosol	55.3	59.32
KRH22905	Soybean	cytosol	48.31	58.61
PGSC0003DMT400020936	Potato	cytosol	47.25	57.47
KRH24879	Soybean	cytosol	47.67	56.68
KRH29930	Soybean	cytosol	41.31	56.2
Zm00001d019862_P001	Maize	cytosol	80.72	55.7
AT5G60570.2	Thale cress	cytosol	45.76	54.96
KRH12864	Soybean	cytosol, plasma membrane	37.71	54.77
CDX80156	Canola	cytosol	43.43	54.09
Bra002471.1-P	Field mustard	cytosol	42.8	53.87
CDY31534	Canola	cytosol	42.8	53.87
KXG30756	Sorghum	cytosol	42.8	47.53
KXG40080	Sorghum	cytosol	40.89	45.09
OQU91835	Sorghum	cytosol, nucleus, plastid	40.04	42.57
OQU83795	Sorghum	cytosol	38.14	40.36
OQU82118	Sorghum	cytosol	16.1	21.84
EER91632	Sorghum	plastid	19.49	21.05
EES06854	Sorghum	cytosol	16.53	20.37
OQU81371	Sorghum	mitochondrion	16.1	20.16
EER95442	Sorghum	mitochondrion	18.22	19.63
KXG29748	Sorghum	plastid	17.58	19.08
KXG24326	Sorghum	cytosol	18.64	18.8
EES06149	Sorghum	cytosol	13.56	18.5
EER97991	Sorghum	mitochondrion	15.89	18.12
EES05304	Sorghum	cytosol, peroxisome, plastid	16.53	16.99
EER90147	Sorghum	cytosol	12.71	15.27

Protein Annotations

EnsemblPlants:OQU82347	EnsemblPlantsGene:SORBI_3006G218600	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF150	PFAM:PF01344
ProteinID:OQU82347	ProteinID:OQU82347.1	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000B425CB7
UniProt:A0A1Z5RF71	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:56578466..56581326

Molecular Weight (calculated)

53137.2 Da

IEP (calculated)

6.810

GRAVY (calculated)

-0.288

Length

472 amino acids

Sequence
(BLAST)

001: MQAAGASRWP GSRRRRVSAR QIMEELQDCN SKCLVALPGS LVLHLFRLFG QQDQSSWQKY ILAYFLLVRN DYFSGESKKH SDVFCDISEL DFFPYATDLD
101: SEELELKEQK PISKAQSGGD SSSNRSNDCY FPGLHDDLSQ DCLAWASRSD YPSLSCLNKR FNLLINSGYL YKLRRKYGIV EHWVYLACSL MPWEAFDPLR
201: KRWMRLPRMP CDECFSCADK ESLAVGTQLL VFGREYTGLA IWMYNLLTRS WSPCTPMNLP RCLFASGSSG EIAIVAGGCD KDGQVLRSVE LYNSEIGHWE
301: TIPDMNLPRR LSSGFFMDGK FYVIGGVSSQ RDSLTCGEEY NLETRTWRRI LDMYPGGTSA SQSPPLVAVV NNQLYAADQS TNVVKKYDKV NNAWNIVKPL
401: PVRADSSNGW GLAFKACGDR LLVIGGHRGP RGEVILLHSW CPEGGEDGAD WEVLSVKERA GVFVYNCAIM GC

Best Arabidopsis Sequence Match ( AT5G60570.2 )
(BLAST)

001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC

Arabidopsis Description

F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.