Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002471.1-P | Field mustard | cytosol | 98.15 | 99.2 |
| CDY31534 | Canola | cytosol | 98.15 | 99.2 |
| AT5G60570.2 | Thale cress | cytosol | 91.56 | 88.3 |
| Solyc11g069320.1.1 | Tomato | plastid | 42.74 | 74.31 |
| VIT_06s0004g02980.t01 | Wine grape | cytosol | 67.81 | 70.6 |
| KRH26429 | Soybean | cytosol | 65.7 | 68.41 |
| KRH29930 | Soybean | cytosol | 60.16 | 65.71 |
| KRH24879 | Soybean | cytosol | 68.07 | 64.99 |
| PGSC0003DMT400020936 | Potato | cytosol | 66.23 | 64.69 |
| KRH22905 | Soybean | cytosol | 65.7 | 64.01 |
| KRH12864 | Soybean | cytosol, plasma membrane | 52.24 | 60.92 |
| KXG27134 | Sorghum | cytosol | 42.74 | 60.22 |
| GSMUA_Achr3P23350_001 | Banana | cytosol, extracellular | 50.92 | 47.89 |
| GSMUA_Achr9P30470_001 | Banana | cytosol | 48.02 | 46.55 |
| TraesCS2D01G463000.1 | Wheat | cytosol | 54.88 | 46.53 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 54.35 | 45.88 |
| TraesCS2B01G484200.1 | Wheat | cytosol | 54.09 | 45.66 |
| CDY33755 | Canola | cytosol | 14.78 | 45.53 |
| HORVU2Hr1G103880.2 | Barley | cytosol | 53.3 | 45.29 |
| Zm00001d026321_P001 | Maize | cytosol | 53.03 | 44.87 |
| Os04t0619300-01 | Rice | cytosol, extracellular | 55.67 | 44.33 |
| CDY70379 | Canola | cytosol | 18.21 | 43.67 |
| OQU82347 | Sorghum | mitochondrion | 54.09 | 43.43 |
| Zm00001d002284_P003 | Maize | mitochondrion | 54.35 | 42.21 |
| GSMUA_Achr11P... | Banana | cytosol | 45.91 | 39.55 |
| Zm00001d007538_P001 | Maize | cytosol | 30.08 | 38.38 |
| CDY52764 | Canola | cytosol | 42.74 | 38.12 |
| CDY46430 | Canola | cytosol | 42.74 | 38.03 |
| CDY16205 | Canola | nucleus | 41.69 | 37.35 |
| CDX73096 | Canola | cytosol | 39.31 | 37.16 |
| CDY62015 | Canola | nucleus | 40.63 | 37.11 |
| CDX96551 | Canola | cytosol | 39.58 | 36.95 |
| CDY60836 | Canola | cytosol | 36.94 | 36.84 |
| CDY09349 | Canola | nucleus | 42.74 | 36.49 |
| CDX81631 | Canola | nucleus | 39.31 | 36.43 |
| CDY49094 | Canola | nucleus | 40.37 | 36.08 |
| CDY62176 | Canola | nucleus | 41.95 | 35.57 |
| CDX68177 | Canola | cytosol | 38.79 | 35.25 |
| CDY66938 | Canola | cytosol, mitochondrion | 16.36 | 35.23 |
| CDY03028 | Canola | cytosol | 41.16 | 34.74 |
| CDY65956 | Canola | cytosol | 17.15 | 34.57 |
| CDY17425 | Canola | cytosol | 36.41 | 34.41 |
| CDY45190 | Canola | nucleus | 40.9 | 34.22 |
| CDX85842 | Canola | cytosol | 38.52 | 34.19 |
| CDX82682 | Canola | cytosol | 26.39 | 31.95 |
| CDY53460 | Canola | cytosol | 14.78 | 31.82 |
| CDY28493 | Canola | cytosol | 32.19 | 29.68 |
| CDY34175 | Canola | cytosol | 31.93 | 29.44 |
| Zm00001d019862_P001 | Maize | cytosol | 52.24 | 28.95 |
| CDY13683 | Canola | cytosol | 32.45 | 28.41 |
| CDY33754 | Canola | nucleus | 18.73 | 28.4 |
| CDY36146 | Canola | cytosol | 31.13 | 28.3 |
| CDY63005 | Canola | cytosol | 31.13 | 28.3 |
| CDY69929 | Canola | cytosol | 31.13 | 28.3 |
| CDY52395 | Canola | cytosol | 31.4 | 27.48 |
| CDY49979 | Canola | cytosol | 29.29 | 27.21 |
| CDX90239 | Canola | cytosol | 28.5 | 27.2 |
| CDY64780 | Canola | cytosol | 30.87 | 26.96 |
| CDY12345 | Canola | cytosol | 29.29 | 24.4 |
| CDY18573 | Canola | cytosol | 21.9 | 23.85 |
| CDY22982 | Canola | cytosol | 21.64 | 23.7 |
| CDY58259 | Canola | cytosol | 21.64 | 23.63 |
| CDX82306 | Canola | cytosol | 21.37 | 23.41 |
| CDX99248 | Canola | cytosol | 21.37 | 23.28 |
| CDY12647 | Canola | cytosol | 21.11 | 22.1 |
| CDY49977 | Canola | cytosol | 26.65 | 21.49 |
| CDX96091 | Canola | cytosol | 20.84 | 21.18 |
| CDY26295 | Canola | mitochondrion, plastid | 21.9 | 20.85 |
| CDY01812 | Canola | cytosol | 20.32 | 20.64 |
| CDX99882 | Canola | mitochondrion, plastid | 21.64 | 20.6 |
| CDX81755 | Canola | cytosol | 20.58 | 20.0 |
| CDX76807 | Canola | cytosol | 19.26 | 19.78 |
| CDY66857 | Canola | cytosol | 18.21 | 19.38 |
| CDY34765 | Canola | cytosol | 19.0 | 19.35 |
| CDY01300 | Canola | cytosol | 11.35 | 19.2 |
| CDY36145 | Canola | cytosol | 17.68 | 19.14 |
| CDY70128 | Canola | cytosol | 16.89 | 18.99 |
| CDY64883 | Canola | golgi, plastid | 20.58 | 18.98 |
| CDY03923 | Canola | cytosol | 16.89 | 18.93 |
| CDY08233 | Canola | mitochondrion | 21.64 | 18.85 |
| CDX90085 | Canola | plastid | 17.15 | 18.84 |
| CDY64382 | Canola | plastid | 16.89 | 18.71 |
| CDY00415 | Canola | mitochondrion | 10.55 | 18.69 |
| CDY35074 | Canola | cytosol | 10.29 | 18.66 |
| CDY26117 | Canola | cytosol | 21.37 | 18.62 |
| CDY11811 | Canola | plastid | 16.89 | 18.55 |
| CDY52247 | Canola | cytosol | 15.57 | 18.44 |
| CDY24045 | Canola | mitochondrion | 21.11 | 18.39 |
| CDY33062 | Canola | mitochondrion, plastid | 21.11 | 18.39 |
| CDY04697 | Canola | cytosol | 10.82 | 18.39 |
| CDY30645 | Canola | nucleus | 10.82 | 18.39 |
| CDY15708 | Canola | cytosol | 16.62 | 18.37 |
| CDY51562 | Canola | cytosol | 17.15 | 18.11 |
| CDX96822 | Canola | extracellular, vacuole | 20.58 | 18.06 |
| CDY02451 | Canola | cytosol | 20.58 | 17.93 |
| CDY10574 | Canola | cytosol | 20.58 | 17.93 |
| CDY01301 | Canola | cytosol | 7.39 | 17.83 |
| CDY58793 | Canola | cytosol | 16.89 | 17.83 |
| CDY17172 | Canola | cytosol | 6.6 | 17.36 |
| CDY33348 | Canola | cytosol | 7.92 | 16.67 |
| CDY54825 | Canola | cytosol | 8.44 | 16.58 |
| CDY15707 | Canola | cytosol, plastid | 14.25 | 15.3 |
| CDY35075 | Canola | cytosol | 6.33 | 13.04 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 11.61 | 12.46 |
Protein Annotations
| EnsemblPlants:CDX80156 | EnsemblPlantsGene:GSBRNA2T00133073001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| PANTHER:PTHR24413 | PANTHER:PTHR24413:SF169 | PFAM:PF00646 | PFAM:PF01344 | ProteinID:CDX80156 | ProteinID:CDX80156.1 |
| SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EB33B2 | MapMan:35.1 | : |
Description
BnaC09g35860D
Coordinates
chrLK031820:-:9553..11609
Molecular Weight (calculated)
42311.2 Da
IEP (calculated)
8.068
GRAVY (calculated)
-0.160
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEHSPQR SQVSASASVI ENDAQRLRLG SSDSLLPGLI DDVALNCLAW VPRTDYPSLS CVSKKYNNLI KSGHLFGLRK ELGIVEYLVF MVCDPRGWLM
101: FSPTKKKWMV LPKMPCDECF NHADKESLAV DDELLVFGRE LFQFAIWKYG LRSRRWVKCE GMHRPRCLFA SGSLGGIAIV AGGTDMNGNI LASAELYDSS
201: SGRWEMLPNM HSPRRLCSGF FMDGRFYVVG GMSSPNVSVT CGEEFDLETR KWRKIEGMYP NVNRAAQAPP LVVVVNNELF TLEYLTNMVK RYDKERNKWE
301: VMGRLPPMVD SSNGWGLAFK PCGDRLLVVC GQRGSNGEGV VVNAWCPKTG ARDGNLDWKV IGVKENVGVF VYNCAVMGC
101: FSPTKKKWMV LPKMPCDECF NHADKESLAV DDELLVFGRE LFQFAIWKYG LRSRRWVKCE GMHRPRCLFA SGSLGGIAIV AGGTDMNGNI LASAELYDSS
201: SGRWEMLPNM HSPRRLCSGF FMDGRFYVVG GMSSPNVSVT CGEEFDLETR KWRKIEGMYP NVNRAAQAPP LVVVVNNELF TLEYLTNMVK RYDKERNKWE
301: VMGRLPPMVD SSNGWGLAFK PCGDRLLVVC GQRGSNGEGV VVNAWCPKTG ARDGNLDWKV IGVKENVGVF VYNCAVMGC
001: MAAEEHSNKR REVSASASAS ASASVVVNLR VGEEDNDGHR LRLGSSDSVL PGLIDDVALN CLAWVPRSDY PSLSCVNKKY NKLINSGHLF ALRKELGIVE
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC
101: YLVFMVCDPR GWLMFSPMKK KWMVLPKMPC DECFNHADKE SLAVDDELLV FGRELFQFAI WKYSLRSRCW VKCEGMHRPR CLFASGSLGG IAIVAGGTDM
201: NGNILASAEL YDSSSGRWEM LPNMHSPRRL CSGFFMDGKF YVIGGMSSPN VSVTFGEEFD LETRKWRKIE GMYPNVNRAA QAPPLVVVVN NELFTLEYST
301: NMVKKYDKVK NKWEVMGRLP PMVDSSNGWG LAFKPCGDQL LVFCGQRGPH GEGIVVNSWC PKSGAKDGNL DWKVLGVKEN VGVFVYNCAV MGC
Arabidopsis Description
F-box/kelch-repeat protein At5g60570 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.