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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY53460 Canola cytosol 93.75 93.75
CDY65956 Canola cytosol 60.23 56.38
CDX82682 Canola cytosol 79.55 44.73
CDY36146 Canola cytosol 100.0 42.21
CDY69929 Canola cytosol 99.43 41.97
CDY63005 Canola cytosol 97.73 41.25
CDY64780 Canola cytosol 90.91 36.87
CDY12345 Canola cytosol 89.2 34.51
CDY33755 Canola cytosol 22.73 32.52
AT5G40680.1 Thale cress mitochondrion 68.18 28.92
CDY34175 Canola cytosol 61.93 26.52
CDY28493 Canola cytosol 61.36 26.28
CDX90239 Canola cytosol 59.09 26.2
CDY52395 Canola cytosol 63.64 25.87
CDY49979 Canola cytosol 58.52 25.25
CDY13683 Canola cytosol 60.8 24.71
KRG94518 Soybean mitochondrion 52.84 23.19
KRH06951 Soybean cytosol 52.84 23.02
KRH57678 Soybean cytosol 50.0 22.34
PGSC0003DMT400021985 Potato nucleus 49.43 20.86
CDY49977 Canola cytosol 55.68 20.85
VIT_14s0068g02150.t01 Wine grape cytosol 49.43 18.24
Solyc07g009410.2.1 Tomato cytosol 44.32 17.49
CDY35075 Canola cytosol 17.61 16.85
CDX80156 Canola cytosol 35.23 16.36
CDY31534 Canola cytosol 34.66 16.27
CDX68177 Canola cytosol 36.93 15.59
CDY60836 Canola cytosol 32.95 15.26
CDX85842 Canola cytosol 36.93 15.22
CDX73096 Canola cytosol 34.66 15.21
CDY62015 Canola nucleus 35.8 15.18
CDX81631 Canola nucleus 35.23 15.16
CDY09349 Canola nucleus 38.07 15.09
CDX96551 Canola cytosol 34.66 15.02
CDY49094 Canola nucleus 35.8 14.86
CDY62176 Canola nucleus 37.5 14.77
CDY52764 Canola cytosol 35.23 14.59
CDY46430 Canola cytosol 35.23 14.55
CDY16205 Canola nucleus 34.66 14.42
CDY45190 Canola nucleus 36.93 14.35
CDY03028 Canola cytosol 36.36 14.25
CDY17425 Canola cytosol 31.25 13.72
CDY33348 Canola cytosol 12.5 12.22
CDY70379 Canola cytosol 10.8 12.03
CDY01300 Canola cytosol 14.2 11.16
CDY00415 Canola mitochondrion 13.07 10.75
CDY54825 Canola cytosol 10.8 9.84
CDX81755 Canola cytosol 19.32 8.72
CDY64382 Canola plastid 16.48 8.48
CDY08233 Canola mitochondrion 19.89 8.05
CDY26117 Canola cytosol 19.89 8.05
CDY03923 Canola cytosol 15.34 7.99
CDY10574 Canola cytosol 19.32 7.82
CDY02451 Canola cytosol 19.32 7.82
CDY24045 Canola mitochondrion 19.32 7.82
CDX96822 Canola extracellular, vacuole 18.75 7.64
CDY33062 Canola mitochondrion, plastid 18.75 7.59
CDX99882 Canola mitochondrion, plastid 15.91 7.04
CDY15708 Canola cytosol 13.64 7.0
CDY58793 Canola cytosol 14.2 6.96
CDY51562 Canola cytosol 14.2 6.96
CDY12647 Canola cytosol 14.2 6.91
CDY52247 Canola cytosol 12.5 6.88
CDY36145 Canola cytosol 13.64 6.86
CDY26295 Canola mitochondrion, plastid 15.34 6.78
CDX99248 Canola cytosol 13.07 6.61
CDX96091 Canola cytosol 13.64 6.43
CDY01812 Canola cytosol 13.64 6.43
CDX90085 Canola plastid 12.5 6.38
CDX82306 Canola cytosol 12.5 6.36
CDY22982 Canola cytosol 12.5 6.36
CDY58259 Canola cytosol 12.5 6.34
CDY18573 Canola cytosol 12.5 6.32
CDY66857 Canola cytosol 12.5 6.18
CDY11811 Canola plastid 11.93 6.09
CDY64883 Canola golgi, plastid 14.2 6.08
CDY30645 Canola nucleus 7.39 5.83
CDY04697 Canola cytosol 7.39 5.83
CDX76807 Canola cytosol 10.8 5.15
CDY34765 Canola cytosol 10.8 5.11
CDY03921 Canola cytosol, extracellular, plasma membrane 10.23 5.1
CDY70128 Canola cytosol 9.66 5.04
CDY15707 Canola cytosol, plastid 7.39 3.68
CDY01301 Canola cytosol 0.0 0.0
CDY33754 Canola nucleus 0.0 0.0
CDY17172 Canola cytosol 0.0 0.0
CDY35074 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY66938EnsemblPlantsGene:GSBRNA2T00057677001Gene3D:2.120.10.80GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR015915InterPro:Kelch-typ_b-propellerInterPro:Kelch_1PANTHER:PTHR24413PANTHER:PTHR24413:SF160PFAM:PF01344
ProteinID:CDY66938ProteinID:CDY66938.1SUPFAM:SSF117281UniParc:UPI0004EE0066UniProt:A0A078JH59MapMan:35.1
Description
BnaA04g28290DBnaA04g28290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JH59]
Coordinates
chrLK035601:+:1385..1915
Molecular Weight (calculated)
19983.0 Da
IEP (calculated)
6.591
GRAVY (calculated)
-0.206
Length
176 amino acids
Sequence
(BLAST)
001: MINGMHKARK FSSGCFLRGK FYVLGGRDDN DKHLTCGESY DETTNSWELI PDMLKDMTVI AHSQSPPLIA VVDDNLYMLE TSLNELRVYD INTNIWKKLG
101: VVPVSANAAF GWGIAFKSMG DRLLVIGTSH SWHRKTVVHS CRPSPDVEEQ HWEEIKHWCV GAELPQFIHN CCVMFA
Best Arabidopsis Sequence Match ( AT3G27150.1 )
(BLAST)
001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
Arabidopsis Description
F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.