Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13683 | Canola | cytosol | 95.15 | 95.15 |
| CDY34175 | Canola | cytosol | 78.52 | 82.73 |
| CDY28493 | Canola | cytosol | 76.91 | 81.02 |
| AT3G27150.1 | Thale cress | cytosol | 74.36 | 76.3 |
| CDY66938 | Canola | cytosol, mitochondrion | 25.87 | 63.64 |
| CDY53460 | Canola | cytosol | 24.94 | 61.36 |
| CDY64780 | Canola | cytosol | 55.89 | 55.76 |
| CDX82682 | Canola | cytosol | 40.18 | 55.59 |
| CDY65956 | Canola | cytosol | 24.02 | 55.32 |
| CDY36146 | Canola | cytosol | 52.19 | 54.2 |
| CDY69929 | Canola | cytosol | 51.27 | 53.24 |
| CDY63005 | Canola | cytosol | 51.27 | 53.24 |
| CDY49979 | Canola | cytosol | 50.12 | 53.19 |
| CDY12345 | Canola | cytosol | 54.27 | 51.65 |
| CDX90239 | Canola | cytosol | 46.88 | 51.13 |
| KRG94518 | Soybean | mitochondrion | 45.5 | 49.13 |
| KRH06951 | Soybean | cytosol | 45.5 | 48.76 |
| KRH57678 | Soybean | cytosol | 43.88 | 48.22 |
| PGSC0003DMT400021985 | Potato | nucleus | 45.5 | 47.24 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 49.42 | 44.86 |
| CDY49977 | Canola | cytosol | 44.57 | 41.06 |
| CDY33755 | Canola | cytosol | 9.7 | 34.15 |
| Solyc07g009410.2.1 | Tomato | cytosol | 33.03 | 32.06 |
| CDY31534 | Canola | cytosol | 27.48 | 31.73 |
| CDX80156 | Canola | cytosol | 27.48 | 31.4 |
| CDX81631 | Canola | nucleus | 29.33 | 31.05 |
| CDY62015 | Canola | nucleus | 29.56 | 30.84 |
| CDX73096 | Canola | cytosol | 28.41 | 30.67 |
| CDY52764 | Canola | cytosol | 30.02 | 30.59 |
| CDY16205 | Canola | nucleus | 29.79 | 30.5 |
| CDY70379 | Canola | cytosol | 11.09 | 30.38 |
| CDY46430 | Canola | cytosol | 29.79 | 30.28 |
| CDY62176 | Canola | nucleus | 31.18 | 30.2 |
| CDY49094 | Canola | nucleus | 29.56 | 30.19 |
| CDY09349 | Canola | nucleus | 30.95 | 30.18 |
| CDX96551 | Canola | cytosol | 27.94 | 29.8 |
| CDY60836 | Canola | cytosol | 26.1 | 29.74 |
| CDX68177 | Canola | cytosol | 28.41 | 29.5 |
| CDX85842 | Canola | cytosol | 28.87 | 29.27 |
| CDY17425 | Canola | cytosol | 26.79 | 28.93 |
| CDY45190 | Canola | nucleus | 30.25 | 28.92 |
| CDY03028 | Canola | cytosol | 29.56 | 28.51 |
| CDY33754 | Canola | nucleus | 14.32 | 24.8 |
| CDX81755 | Canola | cytosol | 17.78 | 19.74 |
| CDY26117 | Canola | cytosol | 19.4 | 19.31 |
| CDY08233 | Canola | mitochondrion | 19.4 | 19.31 |
| CDY64382 | Canola | plastid | 15.01 | 19.01 |
| CDY33348 | Canola | cytosol | 7.85 | 18.89 |
| CDY33062 | Canola | mitochondrion, plastid | 18.94 | 18.85 |
| CDY15708 | Canola | cytosol | 14.78 | 18.66 |
| CDY03923 | Canola | cytosol | 14.55 | 18.64 |
| CDY24045 | Canola | mitochondrion | 18.71 | 18.62 |
| CDY01301 | Canola | cytosol | 6.7 | 18.47 |
| CDY02451 | Canola | cytosol | 18.48 | 18.39 |
| CDY10574 | Canola | cytosol | 18.48 | 18.39 |
| CDY04697 | Canola | cytosol | 9.47 | 18.39 |
| CDX96822 | Canola | extracellular, vacuole | 18.24 | 18.29 |
| CDY66857 | Canola | cytosol | 15.01 | 18.26 |
| CDY58259 | Canola | cytosol | 14.55 | 18.16 |
| CDX90085 | Canola | plastid | 14.32 | 17.97 |
| CDY30645 | Canola | nucleus | 9.24 | 17.94 |
| CDX99882 | Canola | mitochondrion, plastid | 16.4 | 17.84 |
| CDY18573 | Canola | cytosol | 14.32 | 17.82 |
| CDY52247 | Canola | cytosol | 13.16 | 17.81 |
| CDY11811 | Canola | plastid | 14.09 | 17.68 |
| CDY12647 | Canola | cytosol | 14.78 | 17.68 |
| CDY22982 | Canola | cytosol | 14.09 | 17.63 |
| CDY26295 | Canola | mitochondrion, plastid | 16.17 | 17.59 |
| CDY58793 | Canola | cytosol | 14.55 | 17.55 |
| CDY51562 | Canola | cytosol | 14.55 | 17.55 |
| CDY70128 | Canola | cytosol | 13.63 | 17.51 |
| CDY36145 | Canola | cytosol | 14.09 | 17.43 |
| CDY35075 | Canola | cytosol | 7.39 | 17.39 |
| CDX82306 | Canola | cytosol | 13.86 | 17.34 |
| CDX99248 | Canola | cytosol | 13.86 | 17.24 |
| CDY01812 | Canola | cytosol | 14.78 | 17.16 |
| CDY54825 | Canola | cytosol | 7.62 | 17.1 |
| CDX96091 | Canola | cytosol | 14.55 | 16.89 |
| CDY35074 | Canola | cytosol | 7.85 | 16.27 |
| CDY00415 | Canola | mitochondrion | 7.85 | 15.89 |
| CDX76807 | Canola | cytosol | 13.39 | 15.72 |
| CDY01300 | Canola | cytosol | 8.08 | 15.62 |
| CDY34765 | Canola | cytosol | 13.39 | 15.59 |
| CDY64883 | Canola | golgi, plastid | 14.55 | 15.33 |
| CDY15707 | Canola | cytosol, plastid | 12.01 | 14.73 |
| CDY17172 | Canola | cytosol | 4.16 | 12.5 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 10.16 | 12.46 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078IMU0 | EnsemblPlants:CDY52395 | ProteinID:CDY52395 | ProteinID:CDY52395.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00006840001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF01344 | PFscan:PS50181 |
| PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EB0FFD | SEG:seg |
Description
BnaC07g48940DBnaC07g48940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMU0]
Coordinates
chrLK033083:+:13679..15413
Molecular Weight (calculated)
49330.8 Da
IEP (calculated)
7.243
GRAVY (calculated)
-0.467
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKAYVVAKG MDYYQEMLAL GQDHTGRIRA SSSRSRPRKV RIREYKIPDL NEDPCLDLDE EETREVVVFR PQDADYSQNV PQLPYELEVE ILARLPRFEY
101: WKLKFLNKRF SRLLNEGKIF KVRRDRGLVE PSVFMRSHGD TKWTMFDKNF ENYQEVPELP LPSDSSFFLG DKESLCAGTH LIVTGNEGES IALWRYELET
201: SKWFKGPAMI TPRILFASAT CGSVAFLAGG LKMYGDTSKE VVNEAEKYDS RTKTWTRLRG MNKRRQFCSG CYLRGKFYVL GGKDENDKNL TCGERYDELT
301: DSWELIPDIL KDVSFSSVQS PPLIAVVNDN LYSLETSGNE LRVYDTNANA WKKLGDVPVR AKSNGGWGVA FRSLGDKLLV IGESVGPSRT ETMSVYTCRP
401: SANPEEKLLW EESKGCCGVK LSHFILNCCV MIA
101: WKLKFLNKRF SRLLNEGKIF KVRRDRGLVE PSVFMRSHGD TKWTMFDKNF ENYQEVPELP LPSDSSFFLG DKESLCAGTH LIVTGNEGES IALWRYELET
201: SKWFKGPAMI TPRILFASAT CGSVAFLAGG LKMYGDTSKE VVNEAEKYDS RTKTWTRLRG MNKRRQFCSG CYLRGKFYVL GGKDENDKNL TCGERYDELT
301: DSWELIPDIL KDVSFSSVQS PPLIAVVNDN LYSLETSGNE LRVYDTNANA WKKLGDVPVR AKSNGGWGVA FRSLGDKLLV IGESVGPSRT ETMSVYTCRP
401: SANPEEKLLW EESKGCCGVK LSHFILNCCV MIA
001: MLTLGEDQIG RIGASSSWSR SKKLRVHRYE IPDLNVEPSL DWDGEETGEA TKALSSTCLK PKDADYCLLN VPQLVYELEV EILARVPRFE YWKLKLLNKG
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
101: FSRLLKSDEI FKVRRERGVV EPSVFMLSSG DTCWTMFDKG FGNCQKLPEL PSDICFLHGD KESLCAGTHL IVTGKEEKSI ALWRYELETS KWFKGPAMIT
201: PRILFASATC GTVVFVAGGL KIEGNGTMEV VDSVEKYDSK TKTWTLLRGM HKRRKFCSGC YLRGKFYVLG GRDENGQNLT CGESYDEKTN TWELIPDILK
301: DMSFSSVQSP PLIAVVGDDL YSLETSANEL RVYDANANSW KKLGDVPVRA KSNGGWGVAF KSLGDKLLVI GASAGPSRAE TMSVYTSRPS ANPANKLYWE
401: ESKRCCGVRF NHFILNCCVM IA
Arabidopsis Description
F-box/kelch-repeat protein At3g27150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LI89]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.