Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010784.1-P | Field mustard | cytosol | 99.75 | 99.75 |
| CDY49979 | Canola | cytosol | 86.9 | 84.56 |
| CDY49977 | Canola | cytosol | 81.36 | 68.72 |
| CDY66938 | Canola | cytosol, mitochondrion | 26.2 | 59.09 |
| CDX82682 | Canola | cytosol | 44.08 | 55.91 |
| CDY53460 | Canola | cytosol | 24.43 | 55.11 |
| CDY64780 | Canola | cytosol | 59.45 | 54.38 |
| CDY65956 | Canola | cytosol | 25.44 | 53.72 |
| CDY69929 | Canola | cytosol | 56.42 | 53.72 |
| CDY36146 | Canola | cytosol | 56.42 | 53.72 |
| CDY63005 | Canola | cytosol | 55.92 | 53.24 |
| CDY34175 | Canola | cytosol | 53.15 | 51.34 |
| AT5G40680.1 | Thale cress | mitochondrion | 53.65 | 51.33 |
| CDY12345 | Canola | cytosol | 57.43 | 50.11 |
| CDY28493 | Canola | cytosol | 51.64 | 49.88 |
| CDY52395 | Canola | cytosol | 51.13 | 46.88 |
| CDY13683 | Canola | cytosol | 50.88 | 46.65 |
| KRH57678 | Soybean | cytosol | 42.32 | 42.64 |
| PGSC0003DMT400021985 | Potato | nucleus | 42.32 | 40.29 |
| KRH06951 | Soybean | cytosol | 40.55 | 39.85 |
| KRG94518 | Soybean | mitochondrion | 40.05 | 39.65 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 44.33 | 36.9 |
| Solyc07g009410.2.1 | Tomato | cytosol | 32.49 | 28.92 |
| CDY31534 | Canola | cytosol | 27.2 | 28.8 |
| CDX80156 | Canola | cytosol | 27.2 | 28.5 |
| CDY33755 | Canola | cytosol | 8.56 | 27.64 |
| CDY60836 | Canola | cytosol | 25.94 | 27.11 |
| CDX73096 | Canola | cytosol | 27.2 | 26.93 |
| CDY62015 | Canola | nucleus | 27.96 | 26.75 |
| CDX96551 | Canola | cytosol | 27.2 | 26.6 |
| CDY49094 | Canola | nucleus | 28.21 | 26.42 |
| CDX81631 | Canola | nucleus | 27.2 | 26.41 |
| CDX68177 | Canola | cytosol | 27.71 | 26.38 |
| CDY09349 | Canola | nucleus | 29.22 | 26.13 |
| CDX85842 | Canola | cytosol | 27.96 | 26.0 |
| CDY62176 | Canola | nucleus | 29.22 | 25.95 |
| CDY17425 | Canola | cytosol | 26.2 | 25.94 |
| CDY52764 | Canola | cytosol | 27.71 | 25.88 |
| CDY46430 | Canola | cytosol | 27.71 | 25.82 |
| CDY16205 | Canola | nucleus | 26.95 | 25.3 |
| CDY45190 | Canola | nucleus | 27.71 | 24.28 |
| CDY03028 | Canola | cytosol | 27.2 | 24.05 |
| CDY70379 | Canola | cytosol | 9.32 | 23.42 |
| CDY33754 | Canola | nucleus | 12.85 | 20.4 |
| CDY58259 | Canola | cytosol | 17.13 | 19.6 |
| CDY18573 | Canola | cytosol | 17.13 | 19.54 |
| CDX82306 | Canola | cytosol | 16.62 | 19.08 |
| CDX99248 | Canola | cytosol | 16.62 | 18.97 |
| CDY22982 | Canola | cytosol | 16.37 | 18.79 |
| CDY54825 | Canola | cytosol | 8.56 | 17.62 |
| CDY26117 | Canola | cytosol | 19.14 | 17.47 |
| CDY08233 | Canola | mitochondrion | 19.14 | 17.47 |
| CDX81755 | Canola | cytosol | 17.13 | 17.44 |
| CDY33348 | Canola | cytosol | 7.81 | 17.22 |
| CDY30645 | Canola | nucleus | 9.57 | 17.04 |
| CDY15708 | Canola | cytosol | 14.61 | 16.91 |
| CDY33062 | Canola | mitochondrion, plastid | 18.39 | 16.78 |
| CDY24045 | Canola | mitochondrion | 18.39 | 16.78 |
| CDY04697 | Canola | cytosol | 9.32 | 16.59 |
| CDY12647 | Canola | cytosol | 15.11 | 16.57 |
| CDY01301 | Canola | cytosol | 6.55 | 16.56 |
| CDY10574 | Canola | cytosol | 18.14 | 16.55 |
| CDY02451 | Canola | cytosol | 18.14 | 16.55 |
| CDY01812 | Canola | cytosol | 15.37 | 16.35 |
| CDY35074 | Canola | cytosol | 8.56 | 16.27 |
| CDY52247 | Canola | cytosol | 13.1 | 16.25 |
| CDX96091 | Canola | cytosol | 15.11 | 16.09 |
| CDY03923 | Canola | cytosol | 13.6 | 15.98 |
| CDX96822 | Canola | extracellular, vacuole | 17.38 | 15.97 |
| CDY11811 | Canola | plastid | 13.85 | 15.94 |
| CDX90085 | Canola | plastid | 13.85 | 15.94 |
| CDY64382 | Canola | plastid | 13.6 | 15.79 |
| CDX99882 | Canola | mitochondrion, plastid | 15.37 | 15.33 |
| CDY66857 | Canola | cytosol | 13.6 | 15.17 |
| CDY70128 | Canola | cytosol | 12.85 | 15.13 |
| CDY26295 | Canola | mitochondrion, plastid | 15.11 | 15.08 |
| CDY36145 | Canola | cytosol | 13.1 | 14.86 |
| CDX76807 | Canola | cytosol | 13.6 | 14.63 |
| CDY34765 | Canola | cytosol | 13.6 | 14.52 |
| CDY64883 | Canola | golgi, plastid | 14.86 | 14.36 |
| CDY01300 | Canola | cytosol | 8.06 | 14.29 |
| CDY51562 | Canola | cytosol | 12.85 | 14.21 |
| CDY58793 | Canola | cytosol | 12.59 | 13.93 |
| CDY00415 | Canola | mitochondrion | 7.3 | 13.55 |
| CDY17172 | Canola | cytosol | 4.79 | 13.19 |
| CDY35075 | Canola | cytosol | 6.05 | 13.04 |
| CDY15707 | Canola | cytosol, plastid | 10.08 | 11.33 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 8.82 | 9.92 |
Protein Annotations
| EnsemblPlants:CDX90239 | EnsemblPlantsGene:GSBRNA2T00150803001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | PFAM:PF01344 |
| ProteinID:CDX90239 | ProteinID:CDX90239.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EF2C71 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA08g17450D
Coordinates
chrLK031862:+:804279..805472
Molecular Weight (calculated)
45258.6 Da
IEP (calculated)
7.402
GRAVY (calculated)
-0.196
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MILIIGTIPI ILDMYDDSSS ASEGEEIGET KEIAQSLACL TSQNAYHVAP QLLYELQVEI FARVPCPEYW KLQFLNKQFS QLLKSSEIFR TRRELGLVKP
101: YFFMLSRSDR RWTMYDEDFK TSQRLPKLSS GVSFFSGDKE TTCVGTQLIV IWRSEEGIRV WRYELAMHKW FKGPEMITPR VMFASASHGT NAFFAGGFTI
201: SKNGVEVVSI VEKYNTETKT WASIPPMHRR RKLCSGCFLR GKFYVIGGQN ENDENLTCAE SYDEETNSWE LIPNMLADMS LSISQAPPRI AVVNDTLYLL
301: DTSLNELRVY NVNTNTSKKL GTIPVMAHVT KGWGVVFKSV KDNLMLIGAS FNRLHSRKRG IYKSCPSPDM EEIHWEEICC RGGSLNHYIL NCCVMLA
101: YFFMLSRSDR RWTMYDEDFK TSQRLPKLSS GVSFFSGDKE TTCVGTQLIV IWRSEEGIRV WRYELAMHKW FKGPEMITPR VMFASASHGT NAFFAGGFTI
201: SKNGVEVVSI VEKYNTETKT WASIPPMHRR RKLCSGCFLR GKFYVIGGQN ENDENLTCAE SYDEETNSWE LIPNMLADMS LSISQAPPRI AVVNDTLYLL
301: DTSLNELRVY NVNTNTSKKL GTIPVMAHVT KGWGVVFKSV KDNLMLIGAS FNRLHSRKRG IYKSCPSPDM EEIHWEEICC RGGSLNHYIL NCCVMLA
001: MLEDRSPDSC LSTRVFSSSR LSESNWSNSY MYPEDDDKLL GNGKRALEVV GEVRQTKSLK LMGFSIIYDS DSSDYSLSGG EEQADAAIGD GSSSRQEQEQ
101: QSDFNDNGGD SSDSHSLINE IGRDNSIDCL IRCSRSDYGS IASLNRNFRS LVKSGEIYRL RRQNGFVEHW VYFSCQLLEW VAFDPVERRW MQLPTMPSSV
201: TFMCADKESL AVGTDLLVLG KDDFSSHVIY RYSLLTNSWS SGMKMNSPRC LFGSASLGEI AIFAGGCDSQ GKILDFAEMY NSELQTWITL PRMNKPRKMC
301: SGVFMDGKFY VIGGIGGADS KGLTCGEEYD LETKKWTQIP DLSPPRSRAD QADMSPAAEA PPLVAVVNNQ LYAADHADME VRKYDKENKK WLTVGRLPER
401: AGSVNGWGLA FRACGERLIV IGGPKCSGGG FIELNSWIPS DGGPPQWTLL DRKHSPTFVY NCAVMGC
101: QSDFNDNGGD SSDSHSLINE IGRDNSIDCL IRCSRSDYGS IASLNRNFRS LVKSGEIYRL RRQNGFVEHW VYFSCQLLEW VAFDPVERRW MQLPTMPSSV
201: TFMCADKESL AVGTDLLVLG KDDFSSHVIY RYSLLTNSWS SGMKMNSPRC LFGSASLGEI AIFAGGCDSQ GKILDFAEMY NSELQTWITL PRMNKPRKMC
301: SGVFMDGKFY VIGGIGGADS KGLTCGEEYD LETKKWTQIP DLSPPRSRAD QADMSPAAEA PPLVAVVNNQ LYAADHADME VRKYDKENKK WLTVGRLPER
401: AGSVNGWGLA FRACGERLIV IGGPKCSGGG FIELNSWIPS DGGPPQWTLL DRKHSPTFVY NCAVMGC
Arabidopsis Description
SKIP11F-box/kelch-repeat protein SKIP11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L736]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.