Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64780 | Canola | cytosol | 88.57 | 92.86 |
| CDY66938 | Canola | cytosol, mitochondrion | 34.51 | 89.2 |
| CDY65956 | Canola | cytosol | 36.26 | 87.77 |
| CDY36146 | Canola | cytosol | 80.0 | 87.29 |
| CDY69929 | Canola | cytosol | 79.56 | 86.81 |
| CDY63005 | Canola | cytosol | 78.9 | 86.09 |
| CDY53460 | Canola | cytosol | 32.75 | 84.66 |
| CDX82682 | Canola | cytosol | 55.38 | 80.51 |
| AT5G40680.1 | Thale cress | mitochondrion | 56.04 | 61.45 |
| CDY49979 | Canola | cytosol | 53.19 | 59.31 |
| CDX90239 | Canola | cytosol | 50.11 | 57.43 |
| CDY34175 | Canola | cytosol | 50.55 | 55.96 |
| CDY52395 | Canola | cytosol | 51.65 | 54.27 |
| CDY28493 | Canola | cytosol | 49.01 | 54.26 |
| CDY13683 | Canola | cytosol | 50.77 | 53.35 |
| CDY49977 | Canola | cytosol | 46.37 | 44.89 |
| KRH57678 | Soybean | cytosol | 38.02 | 43.91 |
| KRG94518 | Soybean | mitochondrion | 38.02 | 43.14 |
| KRH06951 | Soybean | cytosol | 38.24 | 43.07 |
| PGSC0003DMT400021985 | Potato | nucleus | 37.8 | 41.25 |
| VIT_14s0068g02150.t01 | Wine grape | cytosol | 41.1 | 39.2 |
| CDY70379 | Canola | cytosol | 10.55 | 30.38 |
| CDX68177 | Canola | cytosol | 27.69 | 30.22 |
| CDY33755 | Canola | cytosol | 8.13 | 30.08 |
| CDX96551 | Canola | cytosol | 26.81 | 30.05 |
| CDY60836 | Canola | cytosol | 25.05 | 30.0 |
| CDX85842 | Canola | cytosol | 27.91 | 29.74 |
| CDX73096 | Canola | cytosol | 26.15 | 29.68 |
| CDY31534 | Canola | cytosol | 24.4 | 29.6 |
| CDX80156 | Canola | cytosol | 24.4 | 29.29 |
| CDY62015 | Canola | nucleus | 26.37 | 28.92 |
| CDY09349 | Canola | nucleus | 28.13 | 28.83 |
| CDY17425 | Canola | cytosol | 25.27 | 28.68 |
| CDX81631 | Canola | nucleus | 25.71 | 28.61 |
| CDY16205 | Canola | nucleus | 26.59 | 28.61 |
| CDY52764 | Canola | cytosol | 26.59 | 28.47 |
| CDY62176 | Canola | nucleus | 27.91 | 28.41 |
| CDY46430 | Canola | cytosol | 26.59 | 28.4 |
| CDY49094 | Canola | nucleus | 26.37 | 28.3 |
| Solyc07g009410.2.1 | Tomato | cytosol | 27.69 | 28.25 |
| CDY03028 | Canola | cytosol | 26.81 | 27.17 |
| CDY45190 | Canola | nucleus | 27.03 | 27.15 |
| CDY33754 | Canola | nucleus | 12.53 | 22.8 |
| CDY52247 | Canola | cytosol | 12.97 | 18.44 |
| CDY58259 | Canola | cytosol | 13.85 | 18.16 |
| CDY18573 | Canola | cytosol | 13.85 | 18.1 |
| CDY03923 | Canola | cytosol | 13.19 | 17.75 |
| CDY64382 | Canola | plastid | 13.19 | 17.54 |
| CDX81755 | Canola | cytosol | 14.95 | 17.44 |
| CDY26117 | Canola | cytosol | 16.48 | 17.24 |
| CDY08233 | Canola | mitochondrion | 16.48 | 17.24 |
| CDY24045 | Canola | mitochondrion | 16.48 | 17.24 |
| CDY33348 | Canola | cytosol | 6.81 | 17.22 |
| CDY12647 | Canola | cytosol | 13.63 | 17.13 |
| CDX82306 | Canola | cytosol | 12.97 | 17.05 |
| CDY22982 | Canola | cytosol | 12.97 | 17.05 |
| CDY15708 | Canola | cytosol | 12.75 | 16.91 |
| CDY01812 | Canola | cytosol | 13.85 | 16.89 |
| CDX99882 | Canola | mitochondrion, plastid | 14.73 | 16.83 |
| CDX99248 | Canola | cytosol | 12.75 | 16.67 |
| CDY26295 | Canola | mitochondrion, plastid | 14.51 | 16.58 |
| CDX96091 | Canola | cytosol | 13.41 | 16.35 |
| CDY10574 | Canola | cytosol | 15.6 | 16.32 |
| CDY02451 | Canola | cytosol | 15.6 | 16.32 |
| CDY33062 | Canola | mitochondrion, plastid | 15.6 | 16.32 |
| CDY35075 | Canola | cytosol | 6.59 | 16.3 |
| CDY30645 | Canola | nucleus | 7.91 | 16.14 |
| CDY36145 | Canola | cytosol | 12.31 | 16.0 |
| CDY11811 | Canola | plastid | 12.09 | 15.94 |
| CDX90085 | Canola | plastid | 12.09 | 15.94 |
| CDY35074 | Canola | cytosol | 7.25 | 15.79 |
| CDX96822 | Canola | extracellular, vacuole | 14.95 | 15.74 |
| CDY04697 | Canola | cytosol | 7.69 | 15.7 |
| CDY66857 | Canola | cytosol | 12.09 | 15.45 |
| CDY70128 | Canola | cytosol | 11.43 | 15.43 |
| CDY01301 | Canola | cytosol | 5.27 | 15.29 |
| CDY01300 | Canola | cytosol | 7.47 | 15.18 |
| CDY54825 | Canola | cytosol | 6.37 | 15.03 |
| CDY00415 | Canola | mitochondrion | 7.03 | 14.95 |
| CDY64883 | Canola | golgi, plastid | 13.19 | 14.6 |
| CDY17172 | Canola | cytosol | 4.62 | 14.58 |
| CDY34765 | Canola | cytosol | 11.87 | 14.52 |
| CDY51562 | Canola | cytosol | 11.43 | 14.48 |
| CDY58793 | Canola | cytosol | 11.43 | 14.48 |
| CDX76807 | Canola | cytosol | 11.65 | 14.36 |
| CDY15707 | Canola | cytosol, plastid | 9.89 | 12.75 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 8.57 | 11.05 |
Protein Annotations
| EnsemblPlants:CDY12345 | EnsemblPlantsGene:GSBRNA2T00061491001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF160 | PFAM:PF01344 |
| ProteinID:CDY12345 | ProteinID:CDY12345.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EF0C71 |
| UniProt:A0A078FD84 | MapMan:35.1 | : | : | : | : |
Description
BnaA06g19990DBnaA06g19990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD84]
Coordinates
chrLK032020:-:592823..597016
Molecular Weight (calculated)
52383.2 Da
IEP (calculated)
8.094
GRAVY (calculated)
-0.324
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MITPRAMYGS ASHVLFLNLQ ELMSKEMVKI NPDMLMLSDD QTPKIGASLS QSKRRKISIV GIKPNLPDLN VKPFYDFDEE EKGEITKTFQ NLAGLKTHDA
101: CYVDHKLLYE LKVEIIARLP CFEYWKLQFL NKKFLQLLKS CEIFRVRQEK GLVKPYVILH SGADSNWEMF DKDFKTFRRL PKIPFSDYCF FYSGKETVSV
201: GTQLIVIGKE RDEIVVFRYE LENHKWFKGP SMITPRVMYG SASHGKIAFF AGGIQKDDNE NPIVVRTVEK YNADTKSWTM INGMHKARKF SSGCFLRGKF
301: YVLGGRDEND KHLTCGESYD ETTNSWELIP DMLKDMTFIT PSQSPPLIAV VDDNLYMLET SLNELRVYDI NTNIWKKLGV VPVSTNTTFG WGTAFKSMGD
401: GLLVVGSSHS WHRKGIVYSC RPSPDVEEQH WEELKYWCSG NKLPQFIHNC CVMFA
101: CYVDHKLLYE LKVEIIARLP CFEYWKLQFL NKKFLQLLKS CEIFRVRQEK GLVKPYVILH SGADSNWEMF DKDFKTFRRL PKIPFSDYCF FYSGKETVSV
201: GTQLIVIGKE RDEIVVFRYE LENHKWFKGP SMITPRVMYG SASHGKIAFF AGGIQKDDNE NPIVVRTVEK YNADTKSWTM INGMHKARKF SSGCFLRGKF
301: YVLGGRDEND KHLTCGESYD ETTNSWELIP DMLKDMTFIT PSQSPPLIAV VDDNLYMLET SLNELRVYDI NTNIWKKLGV VPVSTNTTFG WGTAFKSMGD
401: GLLVVGSSHS WHRKGIVYSC RPSPDVEEQH WEELKYWCSG NKLPQFIHNC CVMFA
001: MSLMLQKNQA RGTRASLSQF EPRKLLIAST KPTIPDLNAE PCSDSEEEET VENLTSLAPQ DAHNGLPKLM FDLEVEIFSR LSCFQYWKLN LLNKQFSQLL
101: QSREIFKVRR ERGLVQPYVL MFSSGETCWV MFDKGFKNFR QLPEIPSDFC FFYGDKETIT AGTHLIVIGR EEKRIVVWRY ELEVNKWIND TEMITPRVMY
201: ASASRGTDAF FAGGIKTSEN GGPDVVNVAE RYNSDTKTWK AMKAMHKRRK FSSGCFLRGK FYALGGRDEN DVYLTCGESY DELTDSWKLI PDMLKGMTFM
301: NPQSPPLIAV VKDNLYLLET WLNELWVYDI NANVWKNLGV VPVKANAALG WGVAFKSVGD RILVIGASVT KSWDNKMSVY TCCPFPKVEK ITWEETSCDC
401: VQLGHFIRNC CVMLA
101: QSREIFKVRR ERGLVQPYVL MFSSGETCWV MFDKGFKNFR QLPEIPSDFC FFYGDKETIT AGTHLIVIGR EEKRIVVWRY ELEVNKWIND TEMITPRVMY
201: ASASRGTDAF FAGGIKTSEN GGPDVVNVAE RYNSDTKTWK AMKAMHKRRK FSSGCFLRGK FYALGGRDEN DVYLTCGESY DELTDSWKLI PDMLKGMTFM
301: NPQSPPLIAV VKDNLYLLET WLNELWVYDI NANVWKNLGV VPVKANAALG WGVAFKSVGD RILVIGASVT KSWDNKMSVY TCCPFPKVEK ITWEETSCDC
401: VQLGHFIRNC CVMLA
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FM30]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.