Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36145 | Canola | cytosol | 70.98 | 39.14 |
| CDY11811 | Canola | plastid | 64.77 | 36.23 |
| CDX90085 | Canola | plastid | 64.77 | 36.23 |
| CDY52247 | Canola | cytosol | 59.59 | 35.94 |
| CDY66857 | Canola | cytosol | 65.28 | 35.39 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 63.21 | 35.26 |
| CDY70128 | Canola | cytosol | 59.07 | 33.83 |
| CDY15708 | Canola | cytosol | 58.55 | 32.94 |
| CDY03923 | Canola | cytosol | 54.4 | 31.07 |
| CDY64382 | Canola | plastid | 54.4 | 30.7 |
| CDY15707 | Canola | cytosol, plastid | 39.38 | 21.53 |
| CDY12647 | Canola | cytosol | 29.53 | 15.75 |
| CDY01300 | Canola | cytosol | 18.13 | 15.62 |
| CDX96091 | Canola | cytosol | 30.05 | 15.55 |
| CDY01812 | Canola | cytosol | 30.05 | 15.55 |
| CDY00415 | Canola | mitochondrion | 15.54 | 14.02 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 25.39 | 13.88 |
| CDY64883 | Canola | golgi, plastid | 29.02 | 13.63 |
| CDY33348 | Canola | cytosol | 12.44 | 13.33 |
| CDY53460 | Canola | cytosol | 10.88 | 11.93 |
| CDY66938 | Canola | cytosol, mitochondrion | 9.84 | 10.8 |
| CDY65956 | Canola | cytosol | 9.84 | 10.11 |
| CDX99882 | Canola | mitochondrion, plastid | 20.73 | 10.05 |
| CDY26295 | Canola | mitochondrion, plastid | 20.21 | 9.8 |
| CDY58259 | Canola | cytosol | 17.62 | 9.8 |
| CDY18573 | Canola | cytosol | 17.62 | 9.77 |
| CDX99248 | Canola | cytosol | 17.62 | 9.77 |
| CDY33755 | Canola | cytosol | 6.22 | 9.76 |
| CDY10574 | Canola | cytosol | 21.76 | 9.66 |
| CDY33062 | Canola | mitochondrion, plastid | 21.76 | 9.66 |
| CDY08233 | Canola | mitochondrion | 21.76 | 9.66 |
| CDY26117 | Canola | cytosol | 21.76 | 9.66 |
| CDY02451 | Canola | cytosol | 21.76 | 9.66 |
| CDY24045 | Canola | mitochondrion | 21.24 | 9.43 |
| CDX82306 | Canola | cytosol | 16.58 | 9.25 |
| CDY22982 | Canola | cytosol | 16.58 | 9.25 |
| CDY35075 | Canola | cytosol | 8.81 | 9.24 |
| CDX81755 | Canola | cytosol | 18.65 | 9.23 |
| CDX76807 | Canola | cytosol | 17.62 | 9.21 |
| CDX82682 | Canola | cytosol | 14.51 | 8.95 |
| CDY58793 | Canola | cytosol | 16.58 | 8.91 |
| CDY28493 | Canola | cytosol | 18.65 | 8.76 |
| CDY34175 | Canola | cytosol | 18.65 | 8.76 |
| CDY51562 | Canola | cytosol | 16.06 | 8.64 |
| CDX96822 | Canola | extracellular, vacuole | 19.17 | 8.56 |
| CDX90239 | Canola | cytosol | 17.62 | 8.56 |
| CDY31534 | Canola | cytosol | 16.58 | 8.53 |
| CDX73096 | Canola | cytosol | 17.62 | 8.48 |
| CDX80156 | Canola | cytosol | 16.58 | 8.44 |
| CDX68177 | Canola | cytosol | 18.13 | 8.39 |
| CDY34765 | Canola | cytosol | 16.06 | 8.33 |
| CDY13683 | Canola | cytosol | 18.65 | 8.31 |
| CDY49094 | Canola | nucleus | 18.13 | 8.25 |
| CDY70379 | Canola | cytosol | 6.74 | 8.23 |
| CDX85842 | Canola | cytosol | 18.13 | 8.2 |
| CDY62015 | Canola | nucleus | 17.62 | 8.19 |
| CDY16205 | Canola | nucleus | 17.62 | 8.04 |
| CDY46430 | Canola | cytosol | 17.62 | 7.98 |
| CDY60836 | Canola | cytosol | 15.54 | 7.89 |
| CDY09349 | Canola | nucleus | 18.13 | 7.88 |
| CDX96551 | Canola | cytosol | 16.58 | 7.88 |
| CDY49979 | Canola | cytosol | 16.58 | 7.84 |
| CDX81631 | Canola | nucleus | 16.58 | 7.82 |
| CDY52764 | Canola | cytosol | 17.1 | 7.76 |
| CDY52395 | Canola | cytosol | 17.1 | 7.62 |
| CDY62176 | Canola | nucleus | 17.62 | 7.61 |
| CDY45190 | Canola | nucleus | 17.62 | 7.51 |
| CDY17425 | Canola | cytosol | 15.54 | 7.48 |
| CDY63005 | Canola | cytosol | 15.54 | 7.19 |
| CDY03028 | Canola | cytosol | 16.58 | 7.13 |
| CDY69929 | Canola | cytosol | 15.03 | 6.95 |
| CDY36146 | Canola | cytosol | 15.03 | 6.95 |
| CDY64780 | Canola | cytosol | 15.03 | 6.68 |
| CDY12345 | Canola | cytosol | 15.03 | 6.37 |
| CDY35074 | Canola | cytosol | 6.22 | 5.74 |
| CDY49977 | Canola | cytosol | 13.47 | 5.53 |
| CDY33754 | Canola | nucleus | 6.74 | 5.2 |
| CDY04697 | Canola | cytosol | 3.11 | 2.69 |
| CDY30645 | Canola | nucleus | 3.11 | 2.69 |
| CDY01301 | Canola | cytosol | 2.07 | 2.55 |
| CDY17172 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY54825 | EnsemblPlantsGene:GSBRNA2T00014691001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 | PFAM:PF01344 |
| ProteinID:CDY54825 | ProteinID:CDY54825.1 | SUPFAM:SSF117281 | UniParc:UPI0004EE25C2 | UniProt:A0A078IXC5 | MapMan:35.1 |
Description
BnaC03g75770DBnaC03g75770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXC5]
Coordinates
chrLK033354:+:6932..7585
Molecular Weight (calculated)
22161.0 Da
IEP (calculated)
4.878
GRAVY (calculated)
-0.290
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIPRHDFAC AVVDGLLYVV RGKDSCREHI LSAEVYNPET NQWSLMDCPD RHVLGDFAFS FKSKLYAVSN GSRFIDVYDP KTKTWEELDS GKSLLVYSYT
101: VIRNKVYFLD YNMSGLGVFD LEENSWSSVF VPHESRSDSW FRLREWNNKV ILIAGFQGYN ALTGDLDKED ASKWTVTQIR PSGDDATILL INF
101: VIRNKVYFLD YNMSGLGVFD LEENSWSSVF VPHESRSDSW FRLREWNNKV ILIAGFQGYN ALTGDLDKED ASKWTVTQIR PSGDDATILL INF
001: MVVESSSSPI IPGLTDDVAE LCVSKIPRSS FQITSQVCRR WRSFLRSQHF AAVRKLTGTV EEFLCVLMES ECGRDVYWEV FDASGNKLGQ IPPVPGPLKR
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
Arabidopsis Description
Putative F-box/kelch-repeat protein At1g27420 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZJ3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.