Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011908.1-P | Field mustard | mitochondrion | 99.54 | 99.54 |
| CDY26117 | Canola | cytosol | 99.08 | 99.08 |
| CDY02451 | Canola | cytosol | 97.24 | 97.24 |
| CDY10574 | Canola | cytosol | 96.55 | 96.55 |
| AT1G55270.1 | Thale cress | mitochondrion | 95.17 | 95.39 |
| CDY33062 | Canola | mitochondrion, plastid | 88.97 | 88.97 |
| CDY24045 | Canola | mitochondrion | 88.28 | 88.28 |
| VIT_06s0004g00860.t01 | Wine grape | cytosol | 80.23 | 79.86 |
| Solyc01g005970.2.1 | Tomato | cytosol | 79.31 | 78.95 |
| PGSC0003DMT400081852 | Potato | cytosol | 78.62 | 78.26 |
| PGSC0003DMT400034149 | Potato | cytosol | 77.24 | 76.89 |
| KRH42810 | Soybean | cytosol | 76.55 | 76.2 |
| Solyc01g022740.2.1 | Tomato | cytosol | 76.55 | 76.2 |
| KRH58897 | Soybean | cytosol | 76.32 | 75.97 |
| GSMUA_Achr3P29560_001 | Banana | cytosol | 68.51 | 72.51 |
| GSMUA_Achr7P27010_001 | Banana | cytosol | 68.97 | 72.12 |
| Zm00001d032991_P001 | Maize | cytosol | 70.57 | 70.25 |
| Os03t0167800-02 | Rice | cytosol | 70.11 | 69.63 |
| EER91632 | Sorghum | plastid | 69.66 | 69.34 |
| Os10t0409900-01 | Rice | plastid | 70.11 | 69.0 |
| TraesCS1B01G154600.1 | Wheat | plastid | 68.74 | 68.26 |
| TraesCS4D01G282200.1 | Wheat | cytosol | 64.83 | 67.63 |
| TraesCS3D01G540000.1 | Wheat | cytosol | 66.21 | 67.45 |
| TraesCS3B01G611700.1 | Wheat | cytosol | 65.98 | 67.21 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 66.44 | 67.21 |
| TraesCS4B01G283400.1 | Wheat | cytosol | 65.75 | 66.51 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 65.29 | 65.89 |
| TraesCS4B01G283500.1 | Wheat | cytosol | 64.83 | 65.43 |
| HORVU4Hr1G074720.7 | Barley | plasma membrane | 65.98 | 65.38 |
| EER95442 | Sorghum | mitochondrion | 65.52 | 65.07 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 65.06 | 64.46 |
| TraesCS1D01G136700.1 | Wheat | nucleus | 68.74 | 64.03 |
| KRH11716 | Soybean | cytosol, golgi, plastid | 54.71 | 63.98 |
| HORVU1Hr1G035200.1 | Barley | plasma membrane | 68.05 | 62.32 |
| HORVU3Hr1G116690.2 | Barley | mitochondrion | 65.75 | 58.73 |
| KRH36711 | Soybean | cytosol | 53.1 | 57.32 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 60.92 | 31.21 |
| CDY01301 | Canola | cytosol | 10.8 | 29.94 |
| CDX99882 | Canola | mitochondrion, plastid | 24.6 | 26.88 |
| CDY26295 | Canola | mitochondrion, plastid | 24.37 | 26.63 |
| CDY12647 | Canola | cytosol | 21.84 | 26.24 |
| CDX96091 | Canola | cytosol | 22.07 | 25.74 |
| CDY01812 | Canola | cytosol | 22.07 | 25.74 |
| CDY15708 | Canola | cytosol | 20.23 | 25.66 |
| CDX90085 | Canola | plastid | 20.23 | 25.51 |
| CDY11811 | Canola | plastid | 20.23 | 25.51 |
| CDY04697 | Canola | cytosol | 12.87 | 25.11 |
| CDY30645 | Canola | nucleus | 12.87 | 25.11 |
| CDY52247 | Canola | cytosol | 18.39 | 25.0 |
| CDY03923 | Canola | cytosol | 19.31 | 24.85 |
| CDY66857 | Canola | cytosol | 20.23 | 24.72 |
| CDY70128 | Canola | cytosol | 19.08 | 24.63 |
| CDY64382 | Canola | plastid | 18.85 | 23.98 |
| CDY64883 | Canola | golgi, plastid | 22.53 | 23.84 |
| CDY36145 | Canola | cytosol | 19.08 | 23.71 |
| CDY70379 | Canola | cytosol | 8.51 | 23.42 |
| CDX76807 | Canola | cytosol | 19.54 | 23.04 |
| CDX99248 | Canola | cytosol | 18.39 | 22.99 |
| CDY34765 | Canola | cytosol | 19.54 | 22.85 |
| CDY58793 | Canola | cytosol | 18.85 | 22.84 |
| CDY58259 | Canola | cytosol | 18.16 | 22.77 |
| CDY18573 | Canola | cytosol | 17.93 | 22.41 |
| CDY51562 | Canola | cytosol | 18.39 | 22.28 |
| CDY17172 | Canola | cytosol | 7.36 | 22.22 |
| CDX81755 | Canola | cytosol | 19.77 | 22.05 |
| CDY35074 | Canola | cytosol | 10.57 | 22.01 |
| CDY31534 | Canola | cytosol | 18.85 | 21.87 |
| CDY54825 | Canola | cytosol | 9.66 | 21.76 |
| CDX82306 | Canola | cytosol | 17.24 | 21.68 |
| CDY22982 | Canola | cytosol | 17.24 | 21.68 |
| CDX80156 | Canola | cytosol | 18.85 | 21.64 |
| CDX96822 | Canola | extracellular, vacuole | 21.15 | 21.3 |
| CDY15707 | Canola | cytosol, plastid | 17.01 | 20.96 |
| CDX82682 | Canola | cytosol | 14.71 | 20.45 |
| CDY28493 | Canola | cytosol | 19.31 | 20.44 |
| CDY60836 | Canola | cytosol | 17.7 | 20.26 |
| CDY34175 | Canola | cytosol | 19.08 | 20.19 |
| CDY33348 | Canola | cytosol | 8.28 | 20.0 |
| CDY66938 | Canola | cytosol, mitochondrion | 8.05 | 19.89 |
| CDY17425 | Canola | cytosol | 18.16 | 19.7 |
| CDY01300 | Canola | cytosol | 10.11 | 19.64 |
| CDY16205 | Canola | nucleus | 19.08 | 19.62 |
| CDY33754 | Canola | nucleus | 11.26 | 19.6 |
| CDY62015 | Canola | nucleus | 18.62 | 19.52 |
| CDY46430 | Canola | cytosol | 19.08 | 19.48 |
| CDY13683 | Canola | cytosol | 19.31 | 19.4 |
| CDY52395 | Canola | cytosol | 19.31 | 19.4 |
| CDY52764 | Canola | cytosol | 18.85 | 19.29 |
| CDY65956 | Canola | cytosol | 8.28 | 19.15 |
| CDX90239 | Canola | cytosol | 17.47 | 19.14 |
| CDY49094 | Canola | nucleus | 18.62 | 19.1 |
| CDY49979 | Canola | cytosol | 17.7 | 18.87 |
| CDX81631 | Canola | nucleus | 17.7 | 18.83 |
| CDY53460 | Canola | cytosol | 7.59 | 18.75 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 15.17 | 18.7 |
| CDY09349 | Canola | nucleus | 18.85 | 18.47 |
| CDY36146 | Canola | cytosol | 17.7 | 18.47 |
| CDY45190 | Canola | nucleus | 19.08 | 18.32 |
| CDY63005 | Canola | cytosol | 17.47 | 18.23 |
| CDY69929 | Canola | cytosol | 17.47 | 18.23 |
| CDY00415 | Canola | mitochondrion | 8.97 | 18.22 |
| CDY62176 | Canola | nucleus | 18.62 | 18.12 |
| CDY03028 | Canola | cytosol | 18.62 | 18.04 |
| CDY35075 | Canola | cytosol | 7.59 | 17.93 |
| CDY64780 | Canola | cytosol | 17.7 | 17.74 |
| CDX68177 | Canola | cytosol | 16.32 | 17.03 |
| CDX96551 | Canola | cytosol | 15.63 | 16.75 |
| CDX85842 | Canola | cytosol | 16.32 | 16.63 |
| CDY12345 | Canola | cytosol | 17.24 | 16.48 |
| CDX73096 | Canola | cytosol | 14.94 | 16.21 |
| CDY49977 | Canola | cytosol | 16.55 | 15.32 |
| CDY33755 | Canola | cytosol | 4.14 | 14.63 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:9.2.1.1.3 | UniProt:A0A078F8Z6 | EnsemblPlants:CDY08233 | ProteinID:CDY08233 | ProteinID:CDY08233.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00125555001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24412 | PANTHER:PTHR24412:SF234 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EE8115 |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g13860DBnaA05g13860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8Z6]
Coordinates
chrLK031984:-:251908..253470
Molecular Weight (calculated)
49347.5 Da
IEP (calculated)
10.116
GRAVY (calculated)
-0.418
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSSHRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRSKNSKR ERTRIQPPLL PGLPDDLAVA CLIRVPRAEH
101: RKLRLVCKRW YRLASGNFFY SQRKLLGMSE EWVYVFKRDR DGKISWNTFD PVSQHPQPLP PVPREYSEAV GFGCAVLSGC HLYLFGGKDP LRGSMRRVIF
201: YNARTNKWHR APDMLRKRHF FGSCVINNCL YVAGGECEGI QRTLRSAEVY DPNKNRWSFV ADMSTAMVPL IGVVYDKKWF LKGLGSHQQV MSEAYDPETN
301: SWRPVSDGMV TGWRNPCTSL NGRLYGLDCR DGCKLRVFDE TTDSWTKFMD SRVHLGNSRA LEAAALVPLN NKLCIIRNNM SMSLVDVTNP DKNNPRVWEN
401: IAVKGQSKSI LSNIWSSIAG RAVKSHIVHC QVLQA
101: RKLRLVCKRW YRLASGNFFY SQRKLLGMSE EWVYVFKRDR DGKISWNTFD PVSQHPQPLP PVPREYSEAV GFGCAVLSGC HLYLFGGKDP LRGSMRRVIF
201: YNARTNKWHR APDMLRKRHF FGSCVINNCL YVAGGECEGI QRTLRSAEVY DPNKNRWSFV ADMSTAMVPL IGVVYDKKWF LKGLGSHQQV MSEAYDPETN
301: SWRPVSDGMV TGWRNPCTSL NGRLYGLDCR DGCKLRVFDE TTDSWTKFMD SRVHLGNSRA LEAAALVPLN NKLCIIRNNM SMSLVDVTNP DKNNPRVWEN
401: IAVKGQSKSI LSNIWSSIAG RAVKSHIVHC QVLQA
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.