Factsheet for HORVU3Hr1G116690.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G611700.1	Wheat	cytosol	85.01	96.96
TraesCS3D01G540000.1	Wheat	cytosol	84.19	96.02
TraesCS3A01G534600.1	Wheat	cytosol	82.75	93.5
HORVU4Hr1G074720.7	Barley	plasma membrane	77.62	86.1
Os03t0167800-02	Rice	cytosol	71.05	79.0
EER95442	Sorghum	mitochondrion	68.58	76.26
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	67.56	74.94
HORVU1Hr1G035200.1	Barley	plasma membrane	68.58	70.32
GSMUA_Achr7P27010_001	Banana	cytosol	59.96	70.19
GSMUA_Achr3P29560_001	Banana	cytosol	58.11	68.86
VIT_06s0004g00860.t01	Wine grape	cytosol	60.16	67.05
PGSC0003DMT400081852	Potato	cytosol	59.55	66.36
Solyc01g005970.2.1	Tomato	cytosol	59.55	66.36
CDY08233	Canola	mitochondrion	58.73	65.75
AT1G55270.1	Thale cress	mitochondrion	58.52	65.67
PGSC0003DMT400034149	Potato	cytosol	58.73	65.45
KRH58897	Soybean	cytosol	58.73	65.45
KRH42810	Soybean	cytosol	58.73	65.45
Bra011908.1-P	Field mustard	mitochondrion	58.32	65.29
CDY26117	Canola	cytosol	58.32	65.29
Solyc01g022740.2.1	Tomato	cytosol	58.32	64.99
CDY02451	Canola	cytosol	57.49	64.37
CDY10574	Canola	cytosol	57.49	64.37
Bra030872.1-P	Field mustard	cytosol	57.29	64.14
CDY24045	Canola	mitochondrion	55.85	62.53
CDY33062	Canola	mitochondrion, plastid	55.85	62.53
Bra037989.1-P	Field mustard	cytosol, plastid	55.44	62.07
KRH11716	Soybean	cytosol, golgi, plastid	43.12	56.45
KRH36711	Soybean	cytosol	41.68	50.37
HORVU6Hr1G037850.2	Barley	plastid	43.94	50.23
GSMUA_Achr4P03630_001	Banana	plasma membrane	52.98	30.39
HORVU6Hr1G007030.1	Barley	cytosol	17.86	25.14
HORVU2Hr1G057150.1	Barley	cytosol	8.83	23.12
HORVU2Hr1G057140.1	Barley	cytosol	8.83	23.12
HORVU6Hr1G007080.1	Barley	cytosol	4.11	22.99
HORVU3Hr1G096780.1	Barley	cytosol, plastid	18.07	22.86
HORVU2Hr1G068790.2	Barley	cytosol	17.86	22.66
HORVU2Hr1G103880.2	Barley	cytosol	20.33	22.2
HORVU4Hr1G075310.1	Barley	cytosol	19.92	22.1
HORVU7Hr1G002140.2	Barley	mitochondrion	21.15	21.59
HORVU6Hr1G052010.1	Barley	cytosol	20.33	21.52
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	18.28	20.94
HORVU7Hr1G000010.5	Barley	cytosol	18.07	20.09
HORVU7Hr1G000070.1	Barley	cytosol	18.48	17.14

Protein Annotations

Gene3D:2.120.10.80	MapMan:9.2.1.1.3	UniProt:A0A287MU03	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU3Hr1G116690	EnsemblPlants:HORVU3Hr1G116690.2	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412	PANTHER:PTHR24412:SF234	SMART:SM00256
SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000B4646FA	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr3H:-:696208386..696212108

Molecular Weight (calculated)

55424.2 Da

IEP (calculated)

10.416

GRAVY (calculated)

-0.385

Length

487 amino acids

Sequence
(BLAST)

001: RKKKKTSPFP LIRRRRARPQ GPNCFLLQSA EAEATPARRI LRAWTAAAAG GGLNAEIEQP MQRRRLAEQE GESVSCYCRV DGGLKTVVNA RKFVPGARLC
101: MQPDVKPNKR KTRSSRKERC RTQAPLLPGL PDDLAISCLM RVSRAEHPNL RLVCRKWSRL LSGNYYYSLR KKFGMAEEWV YVFKRDRDQK LSWHAFDPVH
201: QLWRSLPPVP PEYSEAVGFG CAVLSGCYLY LFGGKDPVRG SMRHVVFYNT RTNKWYRAPD MLRKRHLFGS CVINNCLYVA GGECEGIQRT LRSAEVYNPN
301: RNRWSCISEM NTGMVPFTGV VYDGKWFLKG LDSHRQVVSE VYLPTSNTWS TTGNALVAGL RNPTIPFNGR LYSADCRDAC KLRVYDGDIG LWTRFMDSRR
401: HLGSSRAFEA VALVSLNGKI CVIRNNMGMI LVDVCDPTTV IEFESARLWE TFARKGHQHR SLMANLWSAI AGRNLKAHII HCQVLQV

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.