Factsheet for HORVU4Hr1G074720.7

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 2
golgi 2
plasma membrane 3
endoplasmic reticulum 2
vacuole 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
TargetP:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G282200.1	Wheat	cytosol	91.34	96.16
TraesCS4A01G020200.1	Wheat	cytosol	92.26	94.19
TraesCS4B01G283400.1	Wheat	cytosol	92.03	93.95
TraesCS4B01G283500.1	Wheat	cytosol	91.34	93.04
Os03t0167800-02	Rice	cytosol	80.41	80.59
EER95442	Sorghum	mitochondrion	77.9	78.08
HORVU3Hr1G116690.2	Barley	mitochondrion	86.1	77.62
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	76.54	76.54
HORVU1Hr1G035200.1	Barley	plasma membrane	77.45	71.58
GSMUA_Achr7P27010_001	Banana	cytosol	66.97	70.67
GSMUA_Achr3P29560_001	Banana	cytosol	65.6	70.07
PGSC0003DMT400081852	Potato	cytosol	67.2	67.51
VIT_06s0004g00860.t01	Wine grape	cytosol	66.97	67.28
Solyc01g005970.2.1	Tomato	cytosol	66.97	67.28
PGSC0003DMT400034149	Potato	cytosol	66.97	67.28
Solyc01g022740.2.1	Tomato	cytosol	66.51	66.82
AT1G55270.1	Thale cress	mitochondrion	65.6	66.36
CDY08233	Canola	mitochondrion	65.38	65.98
KRH58897	Soybean	cytosol	65.38	65.68
Bra011908.1-P	Field mustard	mitochondrion	64.92	65.52
CDY26117	Canola	cytosol	64.92	65.52
KRH42810	Soybean	cytosol	65.15	65.45
CDY02451	Canola	cytosol	64.46	65.06
CDY10574	Canola	cytosol	64.46	65.06
Bra030872.1-P	Field mustard	cytosol	64.24	64.83
CDY24045	Canola	mitochondrion	61.96	62.53
CDY33062	Canola	mitochondrion, plastid	61.73	62.3
Bra037989.1-P	Field mustard	cytosol, plastid	61.28	61.84
KRH11716	Soybean	cytosol, golgi, plastid	48.06	56.72
KRH36711	Soybean	cytosol	47.15	51.36
HORVU6Hr1G037850.2	Barley	plastid	48.75	50.23
GSMUA_Achr4P03630_001	Banana	plasma membrane	59.91	30.98
HORVU6Hr1G007030.1	Barley	cytosol	20.27	25.72
HORVU3Hr1G096780.1	Barley	cytosol, plastid	21.64	24.68
HORVU2Hr1G068790.2	Barley	cytosol	20.27	23.18
HORVU6Hr1G007080.1	Barley	cytosol	4.56	22.99
HORVU2Hr1G057150.1	Barley	cytosol	9.34	22.04
HORVU2Hr1G057140.1	Barley	cytosol	9.34	22.04
HORVU2Hr1G103880.2	Barley	cytosol	22.1	21.75
HORVU7Hr1G002140.2	Barley	mitochondrion	23.46	21.59
HORVU6Hr1G052010.1	Barley	cytosol	22.55	21.52
HORVU4Hr1G075310.1	Barley	cytosol	21.41	21.41
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	19.59	20.24
HORVU7Hr1G000010.5	Barley	cytosol	19.82	19.86
HORVU7Hr1G000070.1	Barley	cytosol	19.59	16.38

Protein Annotations

Gene3D:2.120.10.80	MapMan:9.2.1.1.3	UniProt:A0A287PP20	EMBL:AK375200	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU4Hr1G074720	EnsemblPlants:HORVU4Hr1G074720.7	InterPro:IPR001810
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412
PANTHER:PTHR24412:SF234	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000B47BFC6	SEG:seg

Description

No Description!

Coordinates

chrchr4H:+:595313586..595315042

Molecular Weight (calculated)

49903.7 Da

IEP (calculated)

9.986

GRAVY (calculated)

-0.185

Length

439 amino acids

Sequence
(BLAST)

001: LNMVALPVPS VISTDILLLG GQVVESVSCY CRVDGGLKTV VNARKFVPGA RLCMQPDVKP SKRKSRSSRK ERCRTQAPLL PGLPDDLAIS CLMRVPRVKH
101: PNLRLVCKRW SRLLSGNYYY SLRKKFGMAE EWVYVFKRDR DQKISWHAFD PVHQLWKSLP PVPPEYSEAV GFGCAVLSGC YLYLFGGKDS VRGSMRRVVF
201: YNTRTNKWHR APDMLRKRHF FGSCVINNCL YVAGGECEGI QRTLRSAEVY NPNRNRWSCI TEMSIGMVPF IGVVYDGKWF LKGFDSHRQI VSEVYLPTSN
301: MWSTTGNELV AGLRNPSISF NGRLYSADCR DACKLRVYDG DTGLWTRFMD SRRHLGSSRS FEAVALVSLD GKICVIRNNM SITLVDVCDP TAIIEIDSAR
401: IWETFARKGQ HRSFIANLWS TIAGRHLKTH IIHCQVLQV

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.