Factsheet for HORVU2Hr1G068790.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G279700.1	Wheat	mitochondrion	90.36	90.6
TraesCS2A01G280900.1	Wheat	mitochondrion	89.84	90.08
TraesCS2B01G298300.1	Wheat	mitochondrion	89.32	89.56
Os04t0380300-01	Rice	plastid	64.06	65.6
OQU81371	Sorghum	mitochondrion	62.5	63.66
HORVU3Hr1G096780.1	Barley	cytosol, plastid	63.02	62.86
VIT_01s0010g03320.t01	Wine grape	cytosol	55.21	55.06
GSMUA_Achr8P28270_001	Banana	cytosol	54.69	54.69
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	53.91	54.19
KRG97442	Soybean	cytosol, nucleus, peroxisome	50.52	52.43
KRH42654	Soybean	cytosol	52.86	52.32
CDY12647	Canola	cytosol	48.18	51.1
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	51.82	51.03
Bra033998.1-P	Field mustard	cytosol	47.92	50.83
KRH31463	Soybean	cytosol	50.78	50.65
Bra004227.1-P	Field mustard	cytosol	48.7	50.13
CDX96091	Canola	cytosol	48.7	50.13
CDY01812	Canola	cytosol	48.18	49.6
AT1G67480.1	Thale cress	cytosol, mitochondrion	48.44	49.47
CDY64883	Canola	golgi, plastid	48.18	45.01
HORVU6Hr1G007030.1	Barley	cytosol	20.83	23.12
HORVU6Hr1G037850.2	Barley	plastid	23.44	21.13
HORVU2Hr1G057140.1	Barley	cytosol	10.16	20.97
HORVU2Hr1G057150.1	Barley	cytosol	10.16	20.97
HORVU4Hr1G074720.7	Barley	plasma membrane	23.18	20.27
HORVU1Hr1G035200.1	Barley	plasma membrane	24.74	20.0
HORVU6Hr1G052010.1	Barley	cytosol	22.14	18.48
HORVU7Hr1G002140.2	Barley	mitochondrion	22.4	18.03
HORVU3Hr1G116690.2	Barley	mitochondrion	22.66	17.86
HORVU4Hr1G075310.1	Barley	cytosol	19.53	17.08
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	18.49	16.71
HORVU6Hr1G007080.1	Barley	cytosol	3.65	16.09
HORVU7Hr1G000010.5	Barley	cytosol	17.97	15.75
HORVU2Hr1G103880.2	Barley	cytosol	17.19	14.8
HORVU7Hr1G000070.1	Barley	cytosol	18.23	13.33

Protein Annotations

EMBL:AK362694	EnsemblPlants:HORVU2Hr1G068790.2	EnsemblPlantsGene:HORVU2Hr1G068790	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24412	PANTHER:PTHR24412:SF377
PFAM:PF01344	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0002006038	UniProt:F2DFM7
MapMan:35.1	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DFM7]

Coordinates

chrchr2H:+:484800316..484809589

Molecular Weight (calculated)

42359.2 Da

IEP (calculated)

8.584

GRAVY (calculated)

-0.103

Length

384 amino acids

Sequence
(BLAST)

001: MLALDGAREP LVQAHMCHRV KMPLKSLGRP SLSPVTMTVK ETNTHDSLLI PGLPEDMAKI CLALVPRRHF PAMGAVSRRW MSFIGSREFS AVRKEVMKIE
101: ELVYVLAAEA GEKGCRWEIL GERKNSAIPP MPGLTKVGFG VVVLYGKLYV IAGYAAIHGM DYVSDDVYEY DARLNRWGAL AKMNVARRDF ACAEVDGTIY
201: AAGGFGSSGN SLSSVEAYDP QQNRWTLIDG LRRPRWGCFA SGLSSKLYIM GGRSSFTIGN SRFVDVYDPG RSRWEEIKRG CVMVTSHAIV GEALFCVEWK
301: NQRCLSVFDP WYSSWKKISV PLTGSSSTRF CLGARGGKLL LLSQEEDDGY RTMTYDPAAA PGSEWGTSEL KPSGLCMCSV TVQV

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.