Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G298300.1 | Wheat | mitochondrion | 94.26 | 94.26 |
| TraesCS2D01G279700.1 | Wheat | mitochondrion | 93.99 | 93.99 |
| HORVU2Hr1G068790.2 | Barley | cytosol | 90.08 | 89.84 |
| Os04t0380300-01 | Rice | plastid | 66.32 | 67.73 |
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 67.36 | 67.01 |
| OQU81371 | Sorghum | mitochondrion | 64.49 | 65.52 |
| VIT_01s0010g03320.t01 | Wine grape | cytosol | 56.66 | 56.36 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 55.61 | 55.76 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 55.87 | 55.73 |
| KRH42654 | Soybean | cytosol | 55.61 | 54.9 |
| KRG97442 | Soybean | cytosol, nucleus, peroxisome | 52.74 | 54.59 |
| KRH31463 | Soybean | cytosol | 53.0 | 52.73 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 52.48 | 51.54 |
| CDY12647 | Canola | cytosol | 48.56 | 51.38 |
| Bra033998.1-P | Field mustard | cytosol | 48.3 | 51.1 |
| Bra004227.1-P | Field mustard | cytosol | 49.35 | 50.67 |
| CDX96091 | Canola | cytosol | 49.35 | 50.67 |
| CDY01812 | Canola | cytosol | 48.83 | 50.13 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 48.04 | 48.94 |
| CDY64883 | Canola | golgi, plastid | 48.56 | 45.26 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 21.41 | 22.59 |
| TraesCS6A01G175700.1 | Wheat | plastid | 24.02 | 21.75 |
| TraesCS2A01G499700.1 | Wheat | cytosol, mitochondrion | 22.45 | 21.61 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 23.5 | 20.93 |
| TraesCS6A01G211500.1 | Wheat | extracellular, golgi | 16.71 | 20.78 |
| TraesCS7A01G496600.1 | Wheat | cytosol | 20.63 | 20.52 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 22.72 | 20.19 |
| TraesCS5A01G544300.1 | Wheat | extracellular, plasma membrane | 14.62 | 19.58 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 22.98 | 19.21 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 22.19 | 18.64 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 12.53 | 18.6 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 12.01 | 18.33 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 17.75 | 17.66 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 17.23 | 17.32 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 16.97 | 17.2 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 19.32 | 17.17 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 15.93 | 16.76 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 18.54 | 16.71 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 18.28 | 15.59 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 17.23 | 13.92 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 18.02 | 13.12 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G280900.1 | EnsemblPlantsGene:TraesCS2A01G280900 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 | PFAM:PF01344 |
| SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2A:-:469192977..469194228
Molecular Weight (calculated)
41842.3 Da
IEP (calculated)
8.720
GRAVY (calculated)
-0.160
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MLALVGAREP LVQAQACHRG TMPLKSLARP RLSPVTMTEK DNNTHDGLIP GLPEDMAKIC LALVPRRHFP AMGAVSRRWM SFIGSREFSA VRKEVGKIEE
101: LVYVLAAEAG ENGCHWEVLG ERKNSAIPPM PGLAKVGFGV VVLYGKLYVI AGYAAVHGND SVSDEVYQYH ARLNRWGALA KMNVARRDFA CAEVDGTIYA
201: AGGFGSSGNS LSSVEAYDPR QNRWRLIDGL RRPRWGCFAS GLHSKLYIMG GRSSFTIGNS RFVDVYDPGR SRWEEIKRGC VMVTSHAVVG ETLFCVEWKN
301: QRCLSAFDPS DGSWKKIPVP LTGSSSTRFC LGARGGKLLL LSQEEEGGYQ TMTYDPAAAP GSEWGTSELK PSGLCLCSLT IQV
101: LVYVLAAEAG ENGCHWEVLG ERKNSAIPPM PGLAKVGFGV VVLYGKLYVI AGYAAVHGND SVSDEVYQYH ARLNRWGALA KMNVARRDFA CAEVDGTIYA
201: AGGFGSSGNS LSSVEAYDPR QNRWRLIDGL RRPRWGCFAS GLHSKLYIMG GRSSFTIGNS RFVDVYDPGR SRWEEIKRGC VMVTSHAVVG ETLFCVEWKN
301: QRCLSAFDPS DGSWKKIPVP LTGSSSTRFC LGARGGKLLL LSQEEEGGYQ TMTYDPAAAP GSEWGTSELK PSGLCLCSLT IQV
001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
Arabidopsis Description
F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.