Factsheet for Os04t0380300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0504900-01	Rice	cytosol	72.53	70.65
OQU81371	Sorghum	mitochondrion	68.27	67.9
TraesCS2D01G279700.1	Wheat	mitochondrion	69.33	67.89
TraesCS2B01G298300.1	Wheat	mitochondrion	68.0	66.58
TraesCS2A01G280900.1	Wheat	mitochondrion	67.73	66.32
HORVU2Hr1G068790.2	Barley	cytosol	65.6	64.06
GSMUA_Achr8P28270_001	Banana	cytosol	64.0	62.5
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	62.93	61.78
VIT_01s0010g03320.t01	Wine grape	cytosol	62.13	60.52
KRG97442	Soybean	cytosol, nucleus, peroxisome	59.2	60.0
KRH42654	Soybean	cytosol	61.6	59.54
KRH31463	Soybean	cytosol	60.53	58.96
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	58.4	56.15
CDY12647	Canola	cytosol	52.0	53.87
Bra033998.1-P	Field mustard	cytosol	52.0	53.87
AT1G67480.1	Thale cress	cytosol, mitochondrion	52.8	52.66
Bra004227.1-P	Field mustard	cytosol	52.27	52.55
CDX96091	Canola	cytosol	52.27	52.55
CDY01812	Canola	cytosol	51.73	52.01
CDY64883	Canola	golgi, plastid	52.0	47.45
Os10t0388200-01	Rice	cytosol	21.07	22.77
Os02t0202900-00	Rice	cytosol	26.4	22.71
Os10t0409900-01	Rice	plastid	26.4	22.4
Os02t0114600-02	Rice	cytosol	21.33	22.22
Os07t0153400-01	Rice	mitochondrion	23.47	21.67
Os03t0167800-02	Rice	cytosol	24.27	20.78
Os06t0655500-01	Rice	cytosol	20.8	20.31
Os02t0574900-01	Rice	cytosol	24.0	19.57
Os10t0363600-01	Rice	cytosol, plastid	24.27	19.16
Os11t0602800-01	Rice	nucleus	20.8	18.06
Os02t0748300-01	Rice	cytosol	20.27	17.84
Os03t0171600-01	Rice	cytosol	19.47	16.94
Os04t0619300-01	Rice	cytosol, extracellular	21.07	16.6

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:4335630	EMBL:AK120132	ProteinID:BAF14511.1	ProteinID:BAS88887.1
ProteinID:CAE03998.1	ProteinID:EAZ30476.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031463
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EnsemblPlantsGene:Os04g0380300	EnsemblPlants:Os04t0380300-01	PFAM:PF01344
PANTHER:PTHR24412	PANTHER:PTHR24412:SF377	UniProt:Q7XNP9	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00001B1895
RefSeq:XP_015636199.1	RefSeq:XP_015636200.1	RefSeq:XP_015636201.1	RefSeq:XP_015636202.1	RefSeq:XP_015636203.1	RefSeq:XP_015636204.1
SEG:seg	:	:	:	:	:

Description

F-box protein 203Kelch-type beta propeller domain containing protein. (Os04t0380300-01);Non-protein coding transcript. (Os04t0380300-02)

Coordinates

chr4:-:18602681..18609094

Molecular Weight (calculated)

41254.8 Da

IEP (calculated)

8.177

GRAVY (calculated)

-0.048

Length

375 amino acids

Sequence
(BLAST)

001: MLTLVGAREP FVKAQTNLPA TMQLKFPTRT QGDSYGALIP GLPEDLAKVC LALVPRSYFP VMGAVSKSWM SFIGSKEFIA VRKEVGRLEE RIYALITGDG
101: GKGPYWEVLG SLEQQNRMLP PMPGLTKAGF SVVVLDGKLL VMAGYGVDYG KECVSDEVYQ YDARLNRWAA LAKMNVARRD FACAEVNGAV YVAGGFGSDG
201: DGLSSVEVYD PQRNKWTIIE SLRRPRWGSF ACSFNGKLYI MGGRSSFTIG NSRFIDVYDP ILHSWTEIKK GCVMVTSHAV INKRLFCIEW KNQRSLAIFN
301: PSDSSWQKIP VPLTGSSATL FSLGVLDGKL LLFSQEEEPG YQTLMYDPTA PAGSEWHTST LKPSGLCLCS VTIES

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.