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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • nucleus 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G167900.1 Wheat plastid 75.92 78.25
TraesCS6A01G175700.1 Wheat plastid 75.46 77.78
HORVU6Hr1G037850.2 Barley plastid 75.23 77.0
Zm00001d015744_P001 Maize plastid 73.39 76.56
TraesCS6B01G209700.1 Wheat cytosol 73.39 75.65
KXG29748 Sorghum plastid 75.46 75.63
GSMUA_Achr7P08330_001 Banana cytosol 51.83 57.36
GSMUA_Achr2P17100_001 Banana cytosol, plastid 52.98 56.62
Os10t0409900-01 Rice plastid 52.06 51.36
Os03t0167800-02 Rice cytosol 49.54 49.32
Os07t0153400-01 Rice mitochondrion 26.61 28.57
Os06t0655500-01 Rice cytosol 24.31 27.6
Os02t0504900-01 Rice cytosol 24.08 27.27
Os04t0380300-01 Rice plastid 22.71 26.4
Os10t0363600-01 Rice cytosol, plastid 25.46 23.37
Os02t0114600-02 Rice cytosol 19.27 23.33
Os02t0574900-01 Rice cytosol 23.85 22.61
Os10t0388200-01 Rice cytosol 17.66 22.19
Os02t0748300-01 Rice cytosol 20.18 20.66
Os03t0171600-01 Rice cytosol 19.72 19.95
Os11t0602800-01 Rice nucleus 18.81 18.98
Os04t0619300-01 Rice cytosol, extracellular 19.72 18.07
Protein Annotations
Gene3D:2.120.10.80EntrezGene:4328661MapMan:9.2.1.1.3ProteinID:BAF08149.1ProteinID:BAS77533.1InterPro:F-box-like_dom_sf
InterPro:F-box_domGO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016567GO:GO:0016740GO:GO:0019538GO:GO:0031463InterPro:IPR001810
InterPro:IPR015915InterPro:Kelch-typ_b-propellerInterPro:Kelch_1EnsemblPlantsGene:Os02g0202900EnsemblPlants:Os02t0202900-00PFAM:PF00646
PFAM:PF01344PANTHER:PTHR24412PANTHER:PTHR24412:SF234UniProt:Q0E2Y9SMART:SM00612SUPFAM:SSF117281
SUPFAM:SSF81383UniParc:UPI0000DF05D4RefSeq:XP_015626735.1SEG:seg::
Description
F-box protein 73Similar to ring canal kelch. (Os02t0202900-00)
Coordinates
chr2:-:5755368..5757895
Molecular Weight (calculated)
46529.1 Da
IEP (calculated)
10.485
GRAVY (calculated)
-0.182
Length
436 amino acids
Sequence
(BLAST)
001: MDRRNQAPPV DSSACLCRVE RSVAGAAAAR LMPRAKACAQ PSLRASIHPL KPKRSPGRDH RGGGGAGGGG GRQCPLIPGL PDDLAVACLI RVPRGDHWKL
101: RLVCRRWSRL LAGNYFYGLR RRLGLAEQWV YAVKRDGEGR VSWDVLDPAR LAWRALPPVP GEYAGAAGFG CAVLGGCHLY LLGGSDPRRG PMRRVVFYSA
201: RSNRWHRAPD MLRRRHGFGC CVMGNRLYVA GGEGCGVGGG GGGGLRSVEV FDPAKNRWSF VSDMAASLMP FVSAVHGGRW YVKGLGAQRQ VMSQVYSPEA
301: DAWSAAHELD AMVTGWRSPS ASLGGRLYAA DCKDGCRLRA YDEAAGAWSG RVDGGQHAGS SHAVEAAAMV ALHGKLCVVR NDMSVSVVDV AAASPRWETV
401: VGKGQMKAFV ANLLSAIAGG RGRAKNRVLH CQVLEA
Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.