Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6D01G167900.1 | Wheat | plastid | 75.92 | 78.25 |
TraesCS6A01G175700.1 | Wheat | plastid | 75.46 | 77.78 |
HORVU6Hr1G037850.2 | Barley | plastid | 75.23 | 77.0 |
Zm00001d015744_P001 | Maize | plastid | 73.39 | 76.56 |
TraesCS6B01G209700.1 | Wheat | cytosol | 73.39 | 75.65 |
KXG29748 | Sorghum | plastid | 75.46 | 75.63 |
GSMUA_Achr7P08330_001 | Banana | cytosol | 51.83 | 57.36 |
GSMUA_Achr2P17100_001 | Banana | cytosol, plastid | 52.98 | 56.62 |
Os10t0409900-01 | Rice | plastid | 52.06 | 51.36 |
Os03t0167800-02 | Rice | cytosol | 49.54 | 49.32 |
Os07t0153400-01 | Rice | mitochondrion | 26.61 | 28.57 |
Os06t0655500-01 | Rice | cytosol | 24.31 | 27.6 |
Os02t0504900-01 | Rice | cytosol | 24.08 | 27.27 |
Os04t0380300-01 | Rice | plastid | 22.71 | 26.4 |
Os10t0363600-01 | Rice | cytosol, plastid | 25.46 | 23.37 |
Os02t0114600-02 | Rice | cytosol | 19.27 | 23.33 |
Os02t0574900-01 | Rice | cytosol | 23.85 | 22.61 |
Os10t0388200-01 | Rice | cytosol | 17.66 | 22.19 |
Os02t0748300-01 | Rice | cytosol | 20.18 | 20.66 |
Os03t0171600-01 | Rice | cytosol | 19.72 | 19.95 |
Os11t0602800-01 | Rice | nucleus | 18.81 | 18.98 |
Os04t0619300-01 | Rice | cytosol, extracellular | 19.72 | 18.07 |
Protein Annotations
Gene3D:2.120.10.80 | EntrezGene:4328661 | MapMan:9.2.1.1.3 | ProteinID:BAF08149.1 | ProteinID:BAS77533.1 | InterPro:F-box-like_dom_sf |
InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0031463 | InterPro:IPR001810 |
InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | EnsemblPlantsGene:Os02g0202900 | EnsemblPlants:Os02t0202900-00 | PFAM:PF00646 |
PFAM:PF01344 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF234 | UniProt:Q0E2Y9 | SMART:SM00612 | SUPFAM:SSF117281 |
SUPFAM:SSF81383 | UniParc:UPI0000DF05D4 | RefSeq:XP_015626735.1 | SEG:seg | : | : |
Description
F-box protein 73Similar to ring canal kelch. (Os02t0202900-00)
Coordinates
chr2:-:5755368..5757895
Molecular Weight (calculated)
46529.1 Da
IEP (calculated)
10.485
GRAVY (calculated)
-0.182
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRRNQAPPV DSSACLCRVE RSVAGAAAAR LMPRAKACAQ PSLRASIHPL KPKRSPGRDH RGGGGAGGGG GRQCPLIPGL PDDLAVACLI RVPRGDHWKL
101: RLVCRRWSRL LAGNYFYGLR RRLGLAEQWV YAVKRDGEGR VSWDVLDPAR LAWRALPPVP GEYAGAAGFG CAVLGGCHLY LLGGSDPRRG PMRRVVFYSA
201: RSNRWHRAPD MLRRRHGFGC CVMGNRLYVA GGEGCGVGGG GGGGLRSVEV FDPAKNRWSF VSDMAASLMP FVSAVHGGRW YVKGLGAQRQ VMSQVYSPEA
301: DAWSAAHELD AMVTGWRSPS ASLGGRLYAA DCKDGCRLRA YDEAAGAWSG RVDGGQHAGS SHAVEAAAMV ALHGKLCVVR NDMSVSVVDV AAASPRWETV
401: VGKGQMKAFV ANLLSAIAGG RGRAKNRVLH CQVLEA
101: RLVCRRWSRL LAGNYFYGLR RRLGLAEQWV YAVKRDGEGR VSWDVLDPAR LAWRALPPVP GEYAGAAGFG CAVLGGCHLY LLGGSDPRRG PMRRVVFYSA
201: RSNRWHRAPD MLRRRHGFGC CVMGNRLYVA GGEGCGVGGG GGGGLRSVEV FDPAKNRWSF VSDMAASLMP FVSAVHGGRW YVKGLGAQRQ VMSQVYSPEA
301: DAWSAAHELD AMVTGWRSPS ASLGGRLYAA DCKDGCRLRA YDEAAGAWSG RVDGGQHAGS SHAVEAAAMV ALHGKLCVVR NDMSVSVVDV AAASPRWETV
401: VGKGQMKAFV ANLLSAIAGG RGRAKNRVLH CQVLEA
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.