Factsheet for Os10t0363600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24326	Sorghum	cytosol	72.84	73.93
TraesCS4A01G472100.1	Wheat	cytosol	69.68	72.27
TraesCS7A01G020100.1	Wheat	cytosol, plastid	68.63	71.49
TraesCS7D01G016400.1	Wheat	cytosol, plastid	68.42	71.27
HORVU7Hr1G002140.2	Barley	mitochondrion	68.21	67.92
Zm00001d049632_P001	Maize	cytosol	68.21	67.64
VIT_18s0001g04730.t01	Wine grape	cytosol, plastid	58.11	57.86
VIT_12s0055g00910.t01	Wine grape	cytosol	58.32	57.83
KRH18847	Soybean	cytosol	57.26	57.26
Solyc01g104980.2.1	Tomato	cytosol, plastid	57.05	57.05
PGSC0003DMT400032733	Potato	cytosol, plastid	56.42	56.42
KRH53131	Soybean	cytosol	56.21	56.09
KRH16647	Soybean	cytosol, plastid	56.21	55.97
KRH72270	Soybean	cytosol	15.37	55.73
KRH62415	Soybean	cytosol	32.21	55.43
KRH42190	Soybean	cytosol, plastid	56.0	55.3
CDY00415	Canola	mitochondrion	24.63	54.67
KRH58301	Soybean	cytosol	55.16	54.47
CDY01300	Canola	cytosol	25.47	54.02
Os02t0574900-01	Rice	cytosol	51.37	53.04
AT1G22040.1	Thale cress	plastid	52.42	52.42
Bra012304.1-P	Field mustard	cytosol	48.63	49.46
CDY01301	Canola	cytosol	15.16	45.86
CDY04697	Canola	cytosol	21.05	44.84
CDY30645	Canola	nucleus	21.05	44.84
GSMUA_Achr2P22090_001	Banana	cytosol	34.95	44.03
Bra031360.1-P	Field mustard	plastid	21.68	42.21
KRH55297	Soybean	cytosol	24.84	40.27
Os06t0655500-01	Rice	cytosol	21.05	26.04
Os07t0153400-01	Rice	mitochondrion	22.11	25.86
Os10t0388200-01	Rice	cytosol	18.74	25.65
Os02t0202900-00	Rice	cytosol	23.37	25.46
Os03t0167800-02	Rice	cytosol	22.53	24.43
Os04t0380300-01	Rice	plastid	19.16	24.27
Os02t0504900-01	Rice	cytosol	19.58	24.16
Os10t0409900-01	Rice	plastid	22.11	23.76
Os02t0114600-02	Rice	cytosol	17.89	23.61
Os11t0602800-01	Rice	nucleus	18.32	20.14
Os03t0171600-01	Rice	cytosol	17.47	19.26
Os02t0748300-01	Rice	cytosol	17.26	19.25
Os04t0619300-01	Rice	cytosol, extracellular	18.11	18.07

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:4348452	ProteinID:AAM18732.1	ProteinID:AAP53323.1	EMBL:AK111523
ProteinID:BAF26355.1	ProteinID:BAT10521.1	ProteinID:EAZ15819.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
EnsemblPlantsGene:Os10g0363600	EnsemblPlants:Os10t0363600-01	PFAM:PF00646	PFAM:PF01344	PFscan:PS50181	PANTHER:PTHR24414
PANTHER:PTHR24414:SF39	UniProt:Q8S6N3	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00000A3022
RefSeq:XP_015614878.1	RefSeq:XP_015614879.1	RefSeq:XP_015614880.1	RefSeq:XP_015614881.1	:	:

Description

F-box protein 547Kelch-type beta propeller domain containing protein. (Os10t0363600-01)

Coordinates

chr10:+:11300743..11303566

Molecular Weight (calculated)

51609.2 Da

IEP (calculated)

6.307

GRAVY (calculated)

-0.084

Length

475 amino acids

Sequence
(BLAST)

001: MGALLSSPNS KNQPWEHGEA SKADSSKKLR MSAPPLSGGY DHPGLIPGLP DEISLQILAR MPRMGYLNAK MVSRSWKAAI TGVELYRVRK ELGVSEEWLY
101: MLTKSDDGKL VWNAFDPVCG QWQRLPLMPG ISHGGECKRG IPGLWLGDLL SAGIRVSDVI RGWLGQRDSL DRLPFCGCAI GTVNGCIYVL GGFSRGSAMK
201: CVWRYDPFVN AWQEVSSMST GRAFCKASLL NNKLYVVGGV SKGKNGLAPL QSAEVFDPRT GIWVEVPDIP FSKAQALPTA FLAELLKPIA TGMTSFGGKL
301: YVPQSLYSWP FFVDVGGEIF DPETNSWAEM PVGMGEGWPA RQAGTKLSAV IDGDLYALEP STSSDRGKIK IYDPQEDAWK VAIGQVPVGD FAESECPYLL
401: AGFLGKLNLI IKDVDSKINI MQTDVLKPVE LSAPGNGPTC QNQQLSSEQE TNLWKVIVSK NLAAAELVSC QVLNI

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.