CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42190	Soybean	cytosol, plastid	94.59	94.59
KRH72270	Soybean	cytosol	23.28	85.5
VIT_12s0055g00910.t01	Wine grape	cytosol	68.61	68.89
Solyc01g104980.2.1	Tomato	cytosol, plastid	64.66	65.47
PGSC0003DMT400032733	Potato	cytosol, plastid	64.66	65.47
GSMUA_Achr6P04050_001	Banana	cytosol	57.17	60.44
KRH53131	Soybean	cytosol	59.67	60.29
KRH18847	Soybean	cytosol	59.04	59.79
KRH62415	Soybean	cytosol	34.1	59.42
KRH16647	Soybean	cytosol, plastid	58.21	58.7
Os02t0574900-01	Rice	cytosol	55.72	58.26
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	55.51	58.04
EES05304	Sorghum	cytosol, peroxisome, plastid	54.68	57.3
HORVU6Hr1G052010.1	Barley	cytosol	54.68	57.17
Zm00001d050862_P001	Maize	cytosol, peroxisome, plastid	53.43	56.36
Os10t0363600-01	Rice	cytosol, plastid	54.47	55.16
TraesCS7D01G016400.1	Wheat	cytosol, plastid	51.56	54.39
TraesCS7A01G020100.1	Wheat	cytosol, plastid	51.14	53.95
TraesCS4A01G472100.1	Wheat	cytosol	51.35	53.93
KXG24326	Sorghum	cytosol	52.39	53.85
GSMUA_Achr10P...	Banana	cytosol	56.13	51.92
HORVU7Hr1G002140.2	Barley	mitochondrion	51.35	51.78
Zm00001d049632_P001	Maize	cytosol	49.9	50.1
GSMUA_Achr2P22090_001	Banana	cytosol	34.72	44.3
KRH55297	Soybean	cytosol	26.82	44.03
KRG93237	Soybean	cytosol	25.99	29.21
KRH56558	Soybean	cytosol	25.78	28.97
KRH11716	Soybean	cytosol, golgi, plastid	22.04	28.49
KRG93186	Soybean	cytosol	23.28	28.14
KRH71403	Soybean	cytosol	19.96	27.91
KRH32035	Soybean	cytosol	19.96	27.91
KRH67237	Soybean	cytosol	19.96	27.83
KRG95556	Soybean	cytosol	19.75	27.54
KRH42654	Soybean	cytosol	21.0	26.03
KRH31463	Soybean	cytosol	20.79	25.97
KRG97442	Soybean	cytosol, nucleus, peroxisome	19.96	25.95
KRH58897	Soybean	cytosol	23.49	25.86
KRH42810	Soybean	cytosol	23.28	25.63
KRH36711	Soybean	cytosol	21.41	25.56
KRH48156	Soybean	cytosol	19.13	25.41
KRH11179	Soybean	mitochondrion, plastid	21.21	25.19
KRH21075	Soybean	mitochondrion	20.79	24.69
KRH48153	Soybean	cytosol	18.3	24.31
KRH48154	Soybean	cytosol	18.5	24.18
KRH26429	Soybean	cytosol	18.3	24.18
KRH61941	Soybean	plastid	17.46	23.93
KRH22905	Soybean	cytosol	18.71	23.14
KRH65052	Soybean	cytosol	15.38	23.12
KRH65051	Soybean	cytosol	15.38	22.56
KRH52601	Soybean	extracellular, golgi	18.71	22.56
KRH12864	Soybean	cytosol, plasma membrane	15.18	22.46
KRH57678	Soybean	cytosol	18.09	22.08
KRH24879	Soybean	cytosol	17.88	21.66
KRH54527	Soybean	cytosol	18.92	20.63
KRH29930	Soybean	cytosol	14.76	20.46
KRG94518	Soybean	mitochondrion	17.05	20.45
KRH03453	Soybean	cytosol	17.26	20.34
KRH63378	Soybean	cytosol	18.5	20.18
KRH56929	Soybean	cytosol	17.05	20.15
KRH06951	Soybean	cytosol	16.63	19.8
KRH74828	Soybean	cytosol	19.33	17.32
KRH70694	Soybean	cytosol	19.13	17.07
KRH45883	Soybean	cytosol	18.92	16.88
KRG99114	Soybean	cytosol	18.3	16.33

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100810940	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02003248	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_05G119400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810
InterPro:IPR015915	UniProt:K7KPR7	ProteinID:KRH58300.1	EnsemblPlants:KRH58301	ProteinID:KRH58301	ProteinID:KRH58301.1
ProteinID:KRH58302.1	ProteinID:KRH58303.1	ProteinID:KRH58304.1	ProteinID:KRH58305.1	ProteinID:KRH58306.1	ProteinID:KRH58307.1
ProteinID:KRH58308.1	ProteinID:KRH58309.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344
PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF45	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281
SUPFAM:SSF81383	UniParc:UPI000233A6DF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:31227257..31236175

Molecular Weight (calculated)

53945.7 Da

IEP (calculated)

7.311

GRAVY (calculated)

-0.227

Length

481 amino acids

Sequence
(BLAST)

001: MGNILNLNNS KTRWKDSYGV LQGESCKRQR LSPNPCGYNA RLIPSLPDEI SIQILARVPR IYYLNLKLVC RAWKETLVSS ELFCVRKELG TMEEWLYILT
101: KVKDDKLLWY ALDPLSRRWQ RLPPMPKVGF EDETKKGLIS FPLRMWSMMG PSIRIVDVIM SWLGRRDALD WMPFCGCSIG AVDGCIYALG GFSRASAMKY
201: VWQYDPIKNS WTEASPMSVG RAYCKTGILN NKLYVVGGVT RGRGGLSPLQ SAEVYDPHTG MWSQLPSMPF ARAQVLPTAF LADLLKPIAT GMASYRGRLF
301: VPQSLYCWPF FVDVGGEVYD PNLNSWLEMP IGMGEGWPAR QAGTKLSITV NDDLYALDPS NSLDSAKIKV YDYEGDTWKV AAGDVPNHDF TDSESPYLLA
401: GLHGKLHVIT KDANDNITVL QADMQNEHAE SAFSQSIFSS PDNSFSEDAE SSAEARREFW KVLATRSGRS AELVNCQSLK I

Best Arabidopsis Sequence Match ( AT1G22040.1 )
(BLAST)

001: MGSVMSLSCS KRKATSQDVE CSSESRKRRK ISSENDEEEC CRLIPSLPDE LSIQILARLP RICYSSVRLV SRRWRSAVST SEVYSLRKEL GRTEEWLYVL
101: TKGHEDKLLW YALDPVSTKW QRLPPMPVVV YEEESRKSLS GLWNMITPSF NVGAIVRSFL GRRDSSEQMP FCGCAIGAVD GGLYVIGGLS RSKTVSCVWR
201: FDPILNSWSE VSSMLASRAY SKTGVLNKKL YVVGGVDRGR GGLSPLQSAE VYDPSTDAWS EVPSMPFSKA QVLPNAFLAD LLKPIATGMT CYNGRLCVPQ
301: SLYSWPFFVD VGGEVYDPET NLWVEMPSGM GEGWPARQAG TKLSVVVDGE LYAFDPSSSM ENGKIKVYDQ KEDTWKVVIG EVPVYDLTDS ESPYLLAGFH
401: GKLHFITRDP NHNVTVLRAD VPNIPVSSSS SSSSSVSIPH LKTNAPNKSD TVTWKLIATK DFGAAELVSC QVIDI

Arabidopsis Description

F-box/kelch-repeat protein At1g22040 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM55]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.