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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G24540.1 KRG89812 AT2G41090.1 17360592
AT2G24540.1 KRG94975 AT2G41090.1 17360592
AT2G24540.1 KRH18664 AT2G41090.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH61941 Soybean plastid 68.92 78.35
VIT_04s0008g02380.t01 Wine grape cytosol, peroxisome, plastid 46.87 50.54
CDX76807 Canola cytosol 44.86 48.51
Bra007843.1-P Field mustard cytosol 44.61 47.85
CDY34765 Canola cytosol 44.36 47.58
AT2G24540.1 Thale cress cytosol 42.11 45.16
GSMUA_AchrUn_... Banana cytosol 39.1 43.7
Os06t0655500-01 Rice cytosol 38.35 39.84
TraesCS7D01G483900.1 Wheat cytosol 38.1 39.69
TraesCS5A01G544300.1 Wheat extracellular, plasma membrane 28.32 39.51
TraesCS7A01G496600.1 Wheat cytosol 37.84 39.22
Zm00001d046922_P001 Maize cytosol 37.34 38.7
EER90147 Sorghum cytosol 37.84 38.42
Zm00001d046921_P001 Maize cytosol 37.84 38.32
KRH11179 Soybean mitochondrion, plastid 31.33 30.86
KRH21075 Soybean mitochondrion 31.33 30.86
KRH72270 Soybean cytosol 8.02 24.43
KRH32035 Soybean cytosol 20.8 24.13
KRH71403 Soybean cytosol 20.55 23.84
KRH67237 Soybean cytosol 20.55 23.77
KRG95556 Soybean cytosol 20.55 23.77
KRH11716 Soybean cytosol, golgi, plastid 19.3 20.7
KRH48153 Soybean cytosol 18.55 20.44
KRG97442 Soybean cytosol, nucleus, peroxisome 18.8 20.27
KRH48154 Soybean cytosol 18.55 20.11
KRH31463 Soybean cytosol 19.05 19.74
KRH48156 Soybean cytosol 17.54 19.34
KRH62415 Soybean cytosol 13.28 19.2
KRH18847 Soybean cytosol 22.56 18.95
KRG93237 Soybean cytosol 20.3 18.93
KRH56558 Soybean cytosol 20.3 18.93
KRH42190 Soybean cytosol, plastid 22.81 18.92
KRH65051 Soybean cytosol 15.54 18.9
KRH58301 Soybean cytosol 22.56 18.71
KRH42654 Soybean cytosol 18.05 18.56
KRH53131 Soybean cytosol 22.06 18.49
KRH16647 Soybean cytosol, plastid 21.8 18.24
KRH58897 Soybean cytosol 19.55 17.85
KRH42810 Soybean cytosol 19.55 17.85
KRH65052 Soybean cytosol 14.29 17.81
KRG93186 Soybean cytosol 17.54 17.59
KRH26429 Soybean cytosol 15.54 17.03
KRH36711 Soybean cytosol 17.04 16.87
KRH22905 Soybean cytosol 16.04 16.45
KRH55297 Soybean cytosol 11.78 16.04
KRH12864 Soybean cytosol, plasma membrane 12.78 15.69
KRH24879 Soybean cytosol 15.54 15.62
KRH29930 Soybean cytosol 13.28 15.27
KRH57678 Soybean cytosol 14.54 14.72
KRH03453 Soybean cytosol 15.04 14.71
KRH54527 Soybean cytosol 15.79 14.29
KRH63378 Soybean cytosol 15.79 14.29
KRH56929 Soybean cytosol 14.54 14.25
KRG94518 Soybean mitochondrion 12.03 11.97
KRH70694 Soybean cytosol 15.79 11.69
KRG99114 Soybean cytosol 15.79 11.69
KRH06951 Soybean cytosol 11.78 11.63
KRH74828 Soybean cytosol 15.54 11.55
KRH45883 Soybean cytosol 15.29 11.32
Protein Annotations
EntrezGene:100802282Gene3D:2.120.10.80MapMan:35.1EMBL:ACUP02003423InterPro:F-box-like_dom_sfEnsemblPlantsGene:GLYMA_06G076900
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR015915UniProt:K7KTQ4EnsemblPlants:KRH52601ProteinID:KRH52601ProteinID:KRH52601.1InterPro:Kelch-typ_b-propeller
PANTHER:PTHR24414PANTHER:PTHR24414:SF31SUPFAM:SSF117281SUPFAM:SSF81383TMHMM:TMhelixUniParc:UPI0002963CD4
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:+:5947978..5950087
Molecular Weight (calculated)
44322.0 Da
IEP (calculated)
6.637
GRAVY (calculated)
-0.050
Length
399 amino acids
Sequence
(BLAST)
001: MINTFVLAIT THSSHLLLLL QIIIFIKTFL PEFSLGLFLN PNIKFTIFRA MAVVGGEKEK EELIPGLPYE IAELCLLHVP YPYQALSRSV SSTWNRAITH
101: PSFIYSKKTL SHPHLFVLAF HSQTGKIQWQ ALDPSSGRWF VLPQMPLPEN TSSTAFASAA LPRQGKLFVI AGGGEGSDTL VYRAATNQWA LAAPTPGGRR
201: RGFFAAEGVE GKIVAVGSGG TDIYDPESDT WREGKTLGGE LERYEVVAAG GKVYVSEGWW WPFMLSPRGW VYETERDTWR EMGSGMREGW SGVSVAVGGR
301: VFVIAEYGDA PVKVYDEEFD TWRYVKGGRF PRDVIKRPFC ATGLEDRIYV ASLDLNVAIG KINVGVNSNN EQVSVTWEVV EAPRAFREFS PSSCQMLYA
Best Arabidopsis Sequence Match ( AT2G24540.1 )
(BLAST)
001: MAEQETTSNI NTINDQAEEE TRTKSQPLIS GLPNDIAELC LLRLPYPYHA LYRSVSSSWN KTITNPRFLF SKQSLSISSP YLFVFAFNKS TARIQWQSLD
101: LASGRWFVLP PMPNSFTKIS SPHALSCASM PRQGKLFVLG GGDVNRSAVV YTALTNRWSC ISPMMSPRTY FVSGNVNGKI MAVGGSVGGN GEATTEVESY
201: DPDNDTWTVV KKLPMVLAKY DSAVIGKEMC VTEGWAWPFM FPPMGQVYDS DEGTWREMSG GMKEGWTGVS VVIRDRLFVI SEHGDFPMKV YCSDDDTWRY
301: VSGEKLQGEK MRRPFAVTGA DDRVFVVASG INVAEGRVSE GQNGDFSVEW RMVSSPKSSI QFSPASCHVL YV
Arabidopsis Description
AFRF-box protein AFR [Source:UniProtKB/Swiss-Prot;Acc:Q8LAW2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.