CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58897	Soybean	cytosol	97.94	97.94
VIT_06s0004g00860.t01	Wine grape	cytosol	86.04	86.04
PGSC0003DMT400081852	Potato	cytosol	83.75	83.75
Solyc01g005970.2.1	Tomato	cytosol	83.75	83.75
PGSC0003DMT400034149	Potato	cytosol	80.55	80.55
Solyc01g022740.2.1	Tomato	cytosol	80.55	80.55
AT1G55270.1	Thale cress	mitochondrion	76.89	77.42
Bra011908.1-P	Field mustard	mitochondrion	76.43	76.78
CDY26117	Canola	cytosol	76.43	76.78
CDY08233	Canola	mitochondrion	76.2	76.55
CDY02451	Canola	cytosol	75.29	75.63
Bra030872.1-P	Field mustard	cytosol	75.06	75.4
CDY10574	Canola	cytosol	75.06	75.4
KRH11716	Soybean	cytosol, golgi, plastid	64.07	75.27
KRH56558	Soybean	cytosol	73.23	74.77
KRG93237	Soybean	cytosol	72.54	74.07
GSMUA_Achr7P27010_001	Banana	cytosol	69.57	73.08
GSMUA_Achr3P29560_001	Banana	cytosol	67.73	72.02
CDY24045	Canola	mitochondrion	70.71	71.03
CDY33062	Canola	mitochondrion, plastid	70.71	71.03
KRG93186	Soybean	cytosol	64.07	70.35
EER91632	Sorghum	plastid	70.02	70.02
Bra037989.1-P	Field mustard	cytosol, plastid	69.57	69.89
Os10t0409900-01	Rice	plastid	70.25	69.46
TraesCS1B01G154600.1	Wheat	plastid	69.34	69.18
Zm00001d032991_P001	Maize	cytosol	68.88	68.88
KRH36711	Soybean	cytosol	62.93	68.24
TraesCS4D01G282200.1	Wheat	cytosol	64.99	68.11
Os03t0167800-02	Rice	cytosol	68.19	68.04
TraesCS4A01G020200.1	Wheat	cytosol	66.13	67.21
TraesCS3B01G611700.1	Wheat	cytosol	65.22	66.74
TraesCS4B01G283400.1	Wheat	cytosol	65.45	66.51
TraesCS3D01G540000.1	Wheat	cytosol	64.76	66.28
EER95442	Sorghum	mitochondrion	66.13	65.98
TraesCS3A01G534600.1	Wheat	cytosol	64.3	65.2
TraesCS4B01G283500.1	Wheat	cytosol	64.3	65.2
HORVU4Hr1G074720.7	Barley	plasma membrane	65.45	65.15
Zm00001d027827_P001	Maize	cytosol, mitochondrion, nucleus	65.22	64.92
TraesCS1D01G136700.1	Wheat	nucleus	68.88	64.45
HORVU1Hr1G035200.1	Barley	plasma membrane	68.88	63.37
HORVU3Hr1G116690.2	Barley	mitochondrion	65.45	58.73
GSMUA_Achr4P03630_001	Banana	plasma membrane	62.47	32.16
KRH11179	Soybean	mitochondrion, plastid	24.71	26.67
KRH21075	Soybean	mitochondrion	24.71	26.67
KRH32035	Soybean	cytosol	19.91	25.29
KRH71403	Soybean	cytosol	19.68	25.0
KRG97442	Soybean	cytosol, nucleus, peroxisome	21.05	24.86
KRH48156	Soybean	cytosol	20.59	24.86
KRH48153	Soybean	cytosol	20.59	24.86
KRH18847	Soybean	cytosol	27.0	24.84
KRH31463	Soybean	cytosol	21.74	24.68
KRH42654	Soybean	cytosol	21.74	24.48
KRG95556	Soybean	cytosol	19.22	24.35
KRH67237	Soybean	cytosol	19.22	24.35
KRH16647	Soybean	cytosol, plastid	26.54	24.32
KRH26429	Soybean	cytosol	20.14	24.18
KRH48154	Soybean	cytosol	20.14	23.91
KRH58301	Soybean	cytosol	25.63	23.28
KRH53131	Soybean	cytosol	24.94	22.9
KRH42190	Soybean	cytosol, plastid	25.17	22.87
KRH65052	Soybean	cytosol	16.7	22.81
KRH22905	Soybean	cytosol	20.14	22.62
KRH65051	Soybean	cytosol	16.93	22.56
KRH62415	Soybean	cytosol	13.96	22.1
KRH24879	Soybean	cytosol	19.68	21.66
KRH57678	Soybean	cytosol	19.22	21.32
KRH29930	Soybean	cytosol	16.7	21.04
KRH12864	Soybean	cytosol, plasma membrane	15.56	20.92
KRH61941	Soybean	plastid	16.25	20.23
KRH56929	Soybean	cytosol	18.76	20.15
KRH03453	Soybean	cytosol	18.76	20.1
KRG94518	Soybean	mitochondrion	18.08	19.7
KRH06951	Soybean	cytosol	18.08	19.55
KRH52601	Soybean	extracellular, golgi	17.85	19.55
KRH54527	Soybean	cytosol	19.45	19.27
KRH72270	Soybean	cytosol	5.72	19.08
KRH63378	Soybean	cytosol	18.99	18.82
KRH55297	Soybean	cytosol	12.59	18.77
KRH74828	Soybean	cytosol	21.51	17.5
KRH70694	Soybean	cytosol	21.51	17.44
KRH45883	Soybean	cytosol	21.05	17.07
KRG99114	Soybean	cytosol	20.59	16.7

Protein Annotations

EntrezGene:100796811	Gene3D:2.120.10.80	MapMan:9.2.1.1.3	EMBL:ACUP02004832	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_08G112900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0031463	UniProt:I1KSA6
InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH42810	ProteinID:KRH42810	ProteinID:KRH42810.1	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	PFAM:PF00646	PFAM:PF01344	PFAM:PF13964	PANTHER:PTHR24412	PANTHER:PTHR24412:SF234
SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0002338F5E	SEG:seg	:

Description

hypothetical protein

Coordinates

chr8:-:8664822..8669658

Molecular Weight (calculated)

49256.6 Da

IEP (calculated)

10.061

GRAVY (calculated)

-0.275

Length

437 amino acids

Sequence
(BLAST)

001: MNQLVESSMN TQRVSRVQAP LVDSVSCYCK VDSGLKTVVG ARKFVPGSKL CIQPDINPNA HRSKNSRRER TRVQPPLLPG LPDDLAIACL IRVPRVEHGK
101: LRLVCKRWYH LLSGNFFYSL RRSLGMAEEW VYVIKRDRDG RISLHAFDPI YQLWQSLPPV PGEYSEALGF GCAVLSGCHL YLFGGRDPLK GSMRRVIFYN
201: ARTNKWHRAP DMLRKRHLFG SCVINNCLYV AGGECEGIQR TLRSAEVYDP NRNRWSFISE MTTAMVPFIG VVHNGTWFLK GLGSNRNVIC ESYSQETDTW
301: TPVSNGMVNG WRNPSISLNG QLYALDCQDG CKLKVYDRAS DSWKKFIDSK LHLGRSRALD AAALVPLNGK LCIIRNNMSI SLVDVSSPNR RVESNPQLWE
401: NIAGKGHVRS LVRNLWSTIA GRGSLKSHIV HCQVLQA

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.