Factsheet for Os10t0409900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91632	Sorghum	plastid	91.18	92.22
TraesCS1B01G154600.1	Wheat	plastid	90.72	91.55
Zm00001d032991_P001	Maize	cytosol	89.59	90.62
TraesCS1D01G136700.1	Wheat	nucleus	90.72	85.87
HORVU1Hr1G035200.1	Barley	plasma membrane	90.05	83.79
Os03t0167800-02	Rice	cytosol	80.32	81.05
GSMUA_Achr7P27010_001	Banana	cytosol	71.72	76.2
GSMUA_Achr3P29560_001	Banana	cytosol	69.46	74.7
VIT_06s0004g00860.t01	Wine grape	cytosol	71.72	72.54
Solyc01g005970.2.1	Tomato	cytosol	71.72	72.54
PGSC0003DMT400081852	Potato	cytosol	71.27	72.08
PGSC0003DMT400034149	Potato	cytosol	70.14	70.94
Solyc01g022740.2.1	Tomato	cytosol	69.91	70.71
Bra011908.1-P	Field mustard	mitochondrion	69.23	70.34
CDY26117	Canola	cytosol	69.23	70.34
KRH42810	Soybean	cytosol	69.46	70.25
KRH58897	Soybean	cytosol	69.46	70.25
CDY08233	Canola	mitochondrion	69.0	70.11
AT1G55270.1	Thale cress	mitochondrion	68.78	70.05
CDY02451	Canola	cytosol	68.78	69.89
CDY10574	Canola	cytosol	68.78	69.89
Bra030872.1-P	Field mustard	cytosol	68.55	69.66
CDY24045	Canola	mitochondrion	66.74	67.82
Bra037989.1-P	Field mustard	cytosol, plastid	66.29	67.36
CDY33062	Canola	mitochondrion, plastid	65.84	66.9
KRH11716	Soybean	cytosol, golgi, plastid	49.77	59.14
KRH36711	Soybean	cytosol	48.19	52.85
Os02t0202900-00	Rice	cytosol	51.36	52.06
GSMUA_Achr4P03630_001	Banana	plasma membrane	62.9	32.74
Os07t0153400-01	Rice	mitochondrion	24.66	26.85
Os04t0380300-01	Rice	plastid	22.4	26.4
Os02t0504900-01	Rice	cytosol	22.85	26.23
Os02t0114600-02	Rice	cytosol	21.27	26.11
Os06t0655500-01	Rice	cytosol	21.04	24.22
Os10t0388200-01	Rice	cytosol	18.1	23.05
Os02t0574900-01	Rice	cytosol	23.53	22.61
Os03t0171600-01	Rice	cytosol	21.95	22.51
Os10t0363600-01	Rice	cytosol, plastid	23.76	22.11
Os02t0748300-01	Rice	cytosol	19.46	20.19
Os04t0619300-01	Rice	cytosol, extracellular	20.14	18.7
Os11t0602800-01	Rice	nucleus	17.65	18.06

Protein Annotations

Gene3D:2.120.10.80	EntrezGene:4348597	MapMan:9.2.1.1.3	ProteinID:AAP53716.1	EMBL:AK068671	ProteinID:BAF26488.1
ProteinID:BAT10800.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
GO:GO:0031463	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EnsemblPlantsGene:Os10g0409900
EnsemblPlants:Os10t0409900-01	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412	PANTHER:PTHR24412:SF234	UniProt:Q7XES2
SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00001A3B84	RefSeq:XP_015614781.1	SEG:seg

Description

F-box protein 553Kelch-type beta propeller domain containing protein. (Os10t0409900-01);Similar to Kelch-motif containing protein (Fragment). (Os10t0409900-02)

Coordinates

chr10:-:14228138..14231920

Molecular Weight (calculated)

49831.1 Da

IEP (calculated)

9.769

GRAVY (calculated)

-0.335

Length

442 amino acids

Sequence
(BLAST)

001: MDSAARASQS AAPPPPGAGV RVRAPLVESV SCYCRLDTGL KTVVDARKFV PGAKMCMQPD VKPNKCKSRG SRKERSRTQA PLLPGLPDDL AIACLIRVPR
101: VEHPNLRIVC KRWNRLLSGN YYYSLRKRNG MAEEWVYVFK RDREGKISWH AFDPLHQLWK SLPPVPAEYS EALGFGCAVL SGCYLYLFGG KDPLRGSMRR
201: VVFYNARTNK WHRAPDMLRK RHFFGSCVIN NCLYVAGGEC EGIQRTLPSA EVYDPNRNRW ACVAEMNNGM VPFIGVVYDG KWFLKGLDSH RQVTSEVYLP
301: SSNLWSTIDD EMVTGWRNPS ITFNGKLYSS DCRDGCKLRV YDPNTGTWAK FMDSKHHLGS SRAFEAAALV TLNGKLCIVR NNMSITLVDI SDPTMSIETD
401: SARMWETVAR KGQHRSFVAN LWSTIAGRNL KSHIIHCQVL QV

Best Arabidopsis Sequence Match ( AT1G55270.1 )
(BLAST)

001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA

Arabidopsis Description

F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.