Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24045 | Canola | mitochondrion | 93.33 | 93.33 |
| CDY26117 | Canola | cytosol | 89.2 | 89.2 |
| CDY08233 | Canola | mitochondrion | 88.97 | 88.97 |
| CDY10574 | Canola | cytosol | 88.97 | 88.97 |
| CDY02451 | Canola | cytosol | 88.74 | 88.74 |
| AT1G55270.1 | Thale cress | mitochondrion | 87.82 | 88.02 |
| VIT_06s0004g00860.t01 | Wine grape | cytosol | 74.02 | 73.68 |
| Solyc01g005970.2.1 | Tomato | cytosol | 73.79 | 73.46 |
| PGSC0003DMT400081852 | Potato | cytosol | 73.1 | 72.77 |
| PGSC0003DMT400034149 | Potato | cytosol | 71.26 | 70.94 |
| KRH42810 | Soybean | cytosol | 71.03 | 70.71 |
| KRH58897 | Soybean | cytosol | 70.8 | 70.48 |
| Solyc01g022740.2.1 | Tomato | cytosol | 70.57 | 70.25 |
| GSMUA_Achr7P27010_001 | Banana | cytosol | 65.98 | 68.99 |
| GSMUA_Achr3P29560_001 | Banana | cytosol | 65.06 | 68.86 |
| Zm00001d032991_P001 | Maize | cytosol | 67.36 | 67.05 |
| EER91632 | Sorghum | plastid | 66.44 | 66.13 |
| Os10t0409900-01 | Rice | plastid | 66.9 | 65.84 |
| TraesCS1B01G154600.1 | Wheat | plastid | 65.75 | 65.3 |
| Os03t0167800-02 | Rice | cytosol | 65.52 | 65.07 |
| TraesCS4D01G282200.1 | Wheat | cytosol | 61.15 | 63.79 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 62.76 | 63.49 |
| TraesCS3B01G611700.1 | Wheat | cytosol | 62.07 | 63.23 |
| TraesCS3D01G540000.1 | Wheat | cytosol | 62.07 | 63.23 |
| TraesCS4B01G283400.1 | Wheat | cytosol | 62.07 | 62.79 |
| TraesCS3A01G534600.1 | Wheat | cytosol | 61.38 | 61.95 |
| HORVU4Hr1G074720.7 | Barley | plasma membrane | 62.3 | 61.73 |
| TraesCS4B01G283500.1 | Wheat | cytosol | 61.15 | 61.72 |
| EER95442 | Sorghum | mitochondrion | 61.38 | 60.96 |
| TraesCS1D01G136700.1 | Wheat | nucleus | 65.29 | 60.81 |
| KRH11716 | Soybean | cytosol, golgi, plastid | 51.72 | 60.48 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 60.92 | 60.36 |
| HORVU1Hr1G035200.1 | Barley | plasma membrane | 65.29 | 59.79 |
| HORVU3Hr1G116690.2 | Barley | mitochondrion | 62.53 | 55.85 |
| KRH36711 | Soybean | cytosol | 50.34 | 54.34 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 58.85 | 30.15 |
| CDY01301 | Canola | cytosol | 10.57 | 29.3 |
| CDX99882 | Canola | mitochondrion, plastid | 23.68 | 25.88 |
| CDY12647 | Canola | cytosol | 21.38 | 25.69 |
| CDY26295 | Canola | mitochondrion, plastid | 23.45 | 25.63 |
| CDY04697 | Canola | cytosol | 12.87 | 25.11 |
| CDX96091 | Canola | cytosol | 21.38 | 24.93 |
| CDY01812 | Canola | cytosol | 21.38 | 24.93 |
| CDY30645 | Canola | nucleus | 12.64 | 24.66 |
| CDX90085 | Canola | plastid | 19.31 | 24.35 |
| CDY11811 | Canola | plastid | 19.31 | 24.35 |
| CDY03923 | Canola | cytosol | 18.85 | 24.26 |
| CDY15708 | Canola | cytosol | 19.08 | 24.2 |
| CDY52247 | Canola | cytosol | 17.7 | 24.06 |
| CDY66857 | Canola | cytosol | 19.54 | 23.88 |
| CDY70128 | Canola | cytosol | 18.39 | 23.74 |
| CDY64382 | Canola | plastid | 18.62 | 23.68 |
| CDY58259 | Canola | cytosol | 18.85 | 23.63 |
| CDX99248 | Canola | cytosol | 18.62 | 23.28 |
| CDY18573 | Canola | cytosol | 18.62 | 23.28 |
| CDX76807 | Canola | cytosol | 19.54 | 23.04 |
| CDY64883 | Canola | golgi, plastid | 21.61 | 22.87 |
| CDY36145 | Canola | cytosol | 18.39 | 22.86 |
| CDY34765 | Canola | cytosol | 19.54 | 22.85 |
| CDY58793 | Canola | cytosol | 18.62 | 22.56 |
| CDX82306 | Canola | cytosol | 17.93 | 22.54 |
| CDY22982 | Canola | cytosol | 17.93 | 22.54 |
| CDY17172 | Canola | cytosol | 7.36 | 22.22 |
| CDY35074 | Canola | cytosol | 10.57 | 22.01 |
| CDY51562 | Canola | cytosol | 18.16 | 22.01 |
| CDY54825 | Canola | cytosol | 9.66 | 21.76 |
| CDX81755 | Canola | cytosol | 19.31 | 21.54 |
| CDY70379 | Canola | cytosol | 7.82 | 21.52 |
| CDY31534 | Canola | cytosol | 18.39 | 21.33 |
| CDX80156 | Canola | cytosol | 18.39 | 21.11 |
| CDY15707 | Canola | cytosol, plastid | 17.01 | 20.96 |
| CDX96822 | Canola | extracellular, vacuole | 20.46 | 20.6 |
| CDY33754 | Canola | nucleus | 11.72 | 20.4 |
| CDX82682 | Canola | cytosol | 14.48 | 20.13 |
| CDY01300 | Canola | cytosol | 10.34 | 20.09 |
| CDY33348 | Canola | cytosol | 8.28 | 20.0 |
| CDY60836 | Canola | cytosol | 17.47 | 20.0 |
| CDY46430 | Canola | cytosol | 19.08 | 19.48 |
| CDY28493 | Canola | cytosol | 18.39 | 19.46 |
| CDY34175 | Canola | cytosol | 18.39 | 19.46 |
| CDY17425 | Canola | cytosol | 17.93 | 19.45 |
| CDY52764 | Canola | cytosol | 18.85 | 19.29 |
| CDY62015 | Canola | nucleus | 18.39 | 19.28 |
| CDY16205 | Canola | nucleus | 18.62 | 19.15 |
| CDX81631 | Canola | nucleus | 17.93 | 19.07 |
| CDY13683 | Canola | cytosol | 18.85 | 18.94 |
| CDY52395 | Canola | cytosol | 18.85 | 18.94 |
| CDY49094 | Canola | nucleus | 18.39 | 18.87 |
| CDY66938 | Canola | cytosol, mitochondrion | 7.59 | 18.75 |
| CDY45190 | Canola | nucleus | 19.31 | 18.54 |
| CDX90239 | Canola | cytosol | 16.78 | 18.39 |
| CDY49979 | Canola | cytosol | 17.24 | 18.38 |
| CDY03028 | Canola | cytosol | 18.85 | 18.26 |
| CDY09349 | Canola | nucleus | 18.62 | 18.24 |
| CDY00415 | Canola | mitochondrion | 8.97 | 18.22 |
| CDY62176 | Canola | nucleus | 18.39 | 17.9 |
| CDY53460 | Canola | cytosol | 7.13 | 17.61 |
| CDY36146 | Canola | cytosol | 16.55 | 17.27 |
| CDX96551 | Canola | cytosol | 16.09 | 17.24 |
| CDX68177 | Canola | cytosol | 16.32 | 17.03 |
| CDY63005 | Canola | cytosol | 16.32 | 17.03 |
| CDY69929 | Canola | cytosol | 16.32 | 17.03 |
| CDY65956 | Canola | cytosol | 7.36 | 17.02 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 13.79 | 17.0 |
| CDX73096 | Canola | cytosol | 15.63 | 16.96 |
| CDY35075 | Canola | cytosol | 7.13 | 16.85 |
| CDX85842 | Canola | cytosol | 16.32 | 16.63 |
| CDY64780 | Canola | cytosol | 16.55 | 16.59 |
| CDY12345 | Canola | cytosol | 16.32 | 15.6 |
| CDY49977 | Canola | cytosol | 16.09 | 14.89 |
| CDY33755 | Canola | cytosol | 3.68 | 13.01 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:9.2.1.1.3 | UniProt:A0A078H6M8 | EnsemblPlants:CDY33062 | ProteinID:CDY33062 | ProteinID:CDY33062.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00053684001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24412 | PANTHER:PTHR24412:SF234 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EB2B69 |
| SEG:seg | : | : | : | : | : |
Description
BnaC06g07170DBnaC06g07170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6M8]
Coordinates
chrLK032305:+:84169..85951
Molecular Weight (calculated)
49067.1 Da
IEP (calculated)
9.156
GRAVY (calculated)
-0.294
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSSQRQSP NGSTGFRLQA PLVDSVSCYC RVDSSLKTVV EARKFVPGSK LCIQPNINPN AHRPSKNSNR ERTRIQPPLL PGLPDDLAVA CLIRVPRADH
101: RKLRLVCKSW HRLASGNFFY SERKLLGRSE EWVYVFKKDR DGKISWNAFD PVSHLPQPLT PLPREYSEAV GFGCAVLSGC RLYLFGGKDP LRGSMRRVIF
201: YNARTNKWHR APDMLRKRHF FGSCVVNNCL YVAGGECEGI HRTLRSAEVY DPNKNRWSFV ADMGASMVPL IGVVYDNKWF LKGLGSHQQV ICEAYDPEAN
301: SWSLVSDGMV TGWIDPCACF NGRLYGLDCR DGCKLRVFDE SRDSWIKFMD CKVHLGNSWP FEAAALVPLN NKLCIIRNNM SMSLVDVTNP DKNSTRLWEN
401: IAVKGESKSI LSNIWSSIAG RAVKCDIVHC QVLQA
101: RKLRLVCKSW HRLASGNFFY SERKLLGRSE EWVYVFKKDR DGKISWNAFD PVSHLPQPLT PLPREYSEAV GFGCAVLSGC RLYLFGGKDP LRGSMRRVIF
201: YNARTNKWHR APDMLRKRHF FGSCVVNNCL YVAGGECEGI HRTLRSAEVY DPNKNRWSFV ADMGASMVPL IGVVYDNKWF LKGLGSHQQV ICEAYDPEAN
301: SWSLVSDGMV TGWIDPCACF NGRLYGLDCR DGCKLRVFDE SRDSWIKFMD CKVHLGNSWP FEAAALVPLN NKLCIIRNNM SMSLVDVTNP DKNSTRLWEN
401: IAVKGESKSI LSNIWSSIAG RAVKCDIVHC QVLQA
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.