Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026073.1-P | Field mustard | cytosol | 96.65 | 97.58 |
| CDY17172 | Canola | cytosol | 53.59 | 77.78 |
| Solyc07g042960.1.1 | Tomato | cytosol, mitochondrion | 39.23 | 46.59 |
| AT1G16250.2 | Thale cress | cytosol | 65.55 | 35.77 |
| CDX81755 | Canola | cytosol | 61.72 | 33.08 |
| CDX96822 | Canola | extracellular, vacuole | 64.59 | 31.25 |
| GSMUA_Achr2P18470_001 | Banana | cytosol | 46.89 | 23.0 |
| CDY01301 | Canola | cytosol | 14.83 | 19.75 |
| CDY33348 | Canola | cytosol | 13.88 | 16.11 |
| CDX82306 | Canola | cytosol | 25.36 | 15.32 |
| CDY22982 | Canola | cytosol | 24.88 | 15.03 |
| CDY18573 | Canola | cytosol | 24.88 | 14.94 |
| CDY33754 | Canola | nucleus | 17.7 | 14.8 |
| CDY58259 | Canola | cytosol | 24.4 | 14.7 |
| CDX99248 | Canola | cytosol | 23.92 | 14.37 |
| CDY12647 | Canola | cytosol | 23.45 | 13.54 |
| CDY52247 | Canola | cytosol | 20.1 | 13.12 |
| CDY70128 | Canola | cytosol | 21.05 | 13.06 |
| CDX96091 | Canola | cytosol | 22.49 | 12.6 |
| CDY01812 | Canola | cytosol | 22.49 | 12.6 |
| CDY26295 | Canola | mitochondrion, plastid | 23.92 | 12.56 |
| CDY11811 | Canola | plastid | 20.57 | 12.46 |
| CDX99882 | Canola | mitochondrion, plastid | 23.45 | 12.31 |
| CDX90085 | Canola | plastid | 20.1 | 12.17 |
| CDY64883 | Canola | golgi, plastid | 23.92 | 12.17 |
| CDY04697 | Canola | cytosol | 12.92 | 12.11 |
| CDY36145 | Canola | cytosol | 20.1 | 12.0 |
| CDY15707 | Canola | cytosol, plastid | 20.1 | 11.9 |
| CDY03923 | Canola | cytosol | 19.14 | 11.83 |
| CDY51562 | Canola | cytosol | 20.1 | 11.7 |
| CDY15708 | Canola | cytosol | 19.14 | 11.66 |
| CDY30645 | Canola | nucleus | 12.44 | 11.66 |
| CDY66857 | Canola | cytosol | 19.62 | 11.52 |
| CDY64382 | Canola | plastid | 18.66 | 11.4 |
| CDY34765 | Canola | cytosol | 20.1 | 11.29 |
| CDY58793 | Canola | cytosol | 19.14 | 11.14 |
| CDX76807 | Canola | cytosol | 19.62 | 11.11 |
| CDY24045 | Canola | mitochondrion | 22.49 | 10.8 |
| CDY26117 | Canola | cytosol | 22.01 | 10.57 |
| CDY02451 | Canola | cytosol | 22.01 | 10.57 |
| CDY10574 | Canola | cytosol | 22.01 | 10.57 |
| CDY33062 | Canola | mitochondrion, plastid | 22.01 | 10.57 |
| CDY08233 | Canola | mitochondrion | 22.01 | 10.57 |
| CDY31534 | Canola | cytosol | 18.66 | 10.4 |
| CDX80156 | Canola | cytosol | 18.66 | 10.29 |
| CDY16205 | Canola | nucleus | 19.62 | 9.69 |
| CDY60836 | Canola | cytosol | 17.22 | 9.47 |
| CDY52764 | Canola | cytosol | 19.14 | 9.41 |
| CDY46430 | Canola | cytosol | 19.14 | 9.39 |
| CDY03028 | Canola | cytosol | 20.1 | 9.35 |
| CDY45190 | Canola | nucleus | 20.1 | 9.27 |
| CDY17425 | Canola | cytosol | 17.7 | 9.23 |
| CDY62176 | Canola | nucleus | 19.62 | 9.17 |
| CDX81631 | Canola | nucleus | 17.7 | 9.05 |
| CDY09349 | Canola | nucleus | 19.14 | 9.01 |
| CDY62015 | Canola | nucleus | 17.7 | 8.92 |
| CDX96551 | Canola | cytosol | 17.22 | 8.87 |
| CDY49094 | Canola | nucleus | 17.7 | 8.73 |
| CDX90239 | Canola | cytosol | 16.27 | 8.56 |
| CDX73096 | Canola | cytosol | 16.27 | 8.48 |
| CDY28493 | Canola | cytosol | 16.27 | 8.27 |
| CDY13683 | Canola | cytosol | 16.75 | 8.08 |
| CDY34175 | Canola | cytosol | 15.79 | 8.03 |
| CDX68177 | Canola | cytosol | 15.79 | 7.91 |
| CDY69929 | Canola | cytosol | 15.79 | 7.91 |
| CDY52395 | Canola | cytosol | 16.27 | 7.85 |
| CDX85842 | Canola | cytosol | 15.79 | 7.73 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 12.92 | 7.65 |
| CDY36146 | Canola | cytosol | 14.83 | 7.43 |
| CDY63005 | Canola | cytosol | 14.83 | 7.43 |
| CDY49979 | Canola | cytosol | 14.35 | 7.35 |
| CDX82682 | Canola | cytosol | 11.0 | 7.35 |
| CDY12345 | Canola | cytosol | 15.79 | 7.25 |
| CDY64780 | Canola | cytosol | 14.83 | 7.14 |
| CDY70379 | Canola | cytosol | 5.26 | 6.96 |
| CDY49977 | Canola | cytosol | 14.83 | 6.6 |
| CDY54825 | Canola | cytosol | 5.74 | 6.22 |
| CDY65956 | Canola | cytosol | 4.31 | 4.79 |
| CDY00415 | Canola | mitochondrion | 3.35 | 3.27 |
| CDY01300 | Canola | cytosol | 3.35 | 3.12 |
| CDY66938 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
| CDY53460 | Canola | cytosol | 0.0 | 0.0 |
| CDY35075 | Canola | cytosol | 0.0 | 0.0 |
| CDY33755 | Canola | cytosol | 0.0 | 0.0 |
| Solyc07g042950.1.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078HC94 | EnsemblPlants:CDY35074 | ProteinID:CDY35074 | ProteinID:CDY35074.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00057945001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24414 | PANTHER:PTHR24414:SF41 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EF0A4B |
Description
BnaA06g10840DBnaA06g10840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC94]
Coordinates
chrLK032346:+:100710..101711
Molecular Weight (calculated)
23561.0 Da
IEP (calculated)
7.938
GRAVY (calculated)
-0.332
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKEKGVNNY FTNVNKFEQG DRSESVDILK SQARIMGTIE QSIIPGLPDD LALRCISKLS HGYHGKLECV SKDWRDLVRC EAYSCYKARN GWSESWLFAH
101: SNNQLVAYDP DADRWHPLPR NEAIQDGWDH SGFACVCVSS CLLVIGGCYV SSFPREEPFV VTNVVMRFDP FKKEWKMVAG MRTPRTRFAC AAVSGKVYVA
201: GGFNLTQSS
101: SNNQLVAYDP DADRWHPLPR NEAIQDGWDH SGFACVCVSS CLLVIGGCYV SSFPREEPFV VTNVVMRFDP FKKEWKMVAG MRTPRTRFAC AAVSGKVYVA
201: GGFNLTQSS
001: MESIEQSIIP GLPDDLALRC IAKLSHGYHG VLECVSRGWR DLVRGADYSC YKARNGWSGS WLFVLTERSK NQWVAYDPEA DRWHPLPRTR AVQDGWHHSG
101: FACVCVSNCL LVIGGCYAPS VSSFPHQKPV VTKDVMRFDP FKKQWKMVAS MRTPRTHFAC TSVSGKVYVA GGRNLTHSRG IPSAEVYDPV ADRWEELPAM
201: PRPQMDCSGL SYRGCFHVLS DQVGFAEQNS SEVFNPRDMT WSTVEDVWPF SRAMQFAVQV MKNDRVYTIV DWGESLIKTR DTDEGEWYNV GSVPSVVLPN
301: HPRELEAFGY GFAALRNELY VIGGKVLKWE ESGAGRFDIV RLPVVRVCNP LDRPLNWRET KPMCIPAGGS IIGCVSLEES SPP
101: FACVCVSNCL LVIGGCYAPS VSSFPHQKPV VTKDVMRFDP FKKQWKMVAS MRTPRTHFAC TSVSGKVYVA GGRNLTHSRG IPSAEVYDPV ADRWEELPAM
201: PRPQMDCSGL SYRGCFHVLS DQVGFAEQNS SEVFNPRDMT WSTVEDVWPF SRAMQFAVQV MKNDRVYTIV DWGESLIKTR DTDEGEWYNV GSVPSVVLPN
301: HPRELEAFGY GFAALRNELY VIGGKVLKWE ESGAGRFDIV RLPVVRVCNP LDRPLNWRET KPMCIPAGGS IIGCVSLEES SPP
Arabidopsis Description
F-box/kelch-repeat protein At1g16250 [Source:UniProtKB/Swiss-Prot;Acc:Q0WW40]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.