Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58793 | Canola | cytosol | 95.82 | 95.82 |
| Bra003447.1-P | Field mustard | cytosol | 94.43 | 94.43 |
| AT3G61350.2 | Thale cress | cytosol | 72.14 | 72.35 |
| VIT_15s0046g02710.t01 | Wine grape | cytosol | 51.53 | 51.53 |
| VIT_15s0046g02790.t01 | Wine grape | cytosol | 37.6 | 48.91 |
| KRH48153 | Soybean | cytosol | 48.19 | 47.79 |
| KRH48154 | Soybean | cytosol | 45.96 | 44.84 |
| KRH48156 | Soybean | cytosol | 43.73 | 43.37 |
| PGSC0003DMT400000478 | Potato | nucleus | 47.08 | 42.36 |
| Solyc01g094520.2.1 | Tomato | nucleus | 46.8 | 42.11 |
| KRH65051 | Soybean | cytosol | 37.33 | 40.85 |
| KRH65052 | Soybean | cytosol | 36.21 | 40.62 |
| HORVU6Hr1G007030.1 | Barley | cytosol | 36.21 | 37.57 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 37.88 | 37.47 |
| Os02t0114600-02 | Rice | cytosol | 36.77 | 36.67 |
| EES06149 | Sorghum | cytosol | 35.1 | 36.42 |
| TraesCS6B01G052900.2 | Wheat | cytosol | 38.72 | 36.39 |
| GSMUA_Achr4P20790_001 | Banana | extracellular | 37.88 | 36.07 |
| TraesCS6D01G043400.1 | Wheat | cytosol | 38.16 | 35.86 |
| Zm00001d014986_P001 | Maize | cytosol | 33.43 | 33.06 |
| CDX82306 | Canola | cytosol | 23.68 | 24.57 |
| CDY22982 | Canola | cytosol | 23.12 | 23.99 |
| CDY18573 | Canola | cytosol | 21.73 | 22.41 |
| CDY58259 | Canola | cytosol | 21.45 | 22.19 |
| CDX99248 | Canola | cytosol | 21.45 | 22.13 |
| CDY01301 | Canola | cytosol | 9.19 | 21.02 |
| CDY52247 | Canola | cytosol | 18.66 | 20.94 |
| CDX76807 | Canola | cytosol | 21.45 | 20.87 |
| CDY12647 | Canola | cytosol | 20.61 | 20.44 |
| CDY34765 | Canola | cytosol | 21.17 | 20.43 |
| CDY15708 | Canola | cytosol | 19.5 | 20.41 |
| CDX96091 | Canola | cytosol | 21.17 | 20.38 |
| CDY11811 | Canola | plastid | 19.5 | 20.29 |
| CDX90085 | Canola | plastid | 19.5 | 20.29 |
| CDY36145 | Canola | cytosol | 19.78 | 20.29 |
| CDY01812 | Canola | cytosol | 20.89 | 20.11 |
| CDY35074 | Canola | cytosol | 11.7 | 20.1 |
| CDY04697 | Canola | cytosol | 12.26 | 19.73 |
| CDY30645 | Canola | nucleus | 12.26 | 19.73 |
| CDY66857 | Canola | cytosol | 19.22 | 19.38 |
| CDX99882 | Canola | mitochondrion, plastid | 21.45 | 19.35 |
| CDY10574 | Canola | cytosol | 23.4 | 19.31 |
| CDY02451 | Canola | cytosol | 23.4 | 19.31 |
| CDY64382 | Canola | plastid | 18.38 | 19.3 |
| CDY70128 | Canola | cytosol | 18.11 | 19.29 |
| CDY03923 | Canola | cytosol | 18.11 | 19.23 |
| CDY26295 | Canola | mitochondrion, plastid | 20.89 | 18.84 |
| CDY26117 | Canola | cytosol | 22.56 | 18.62 |
| CDY08233 | Canola | mitochondrion | 22.28 | 18.39 |
| CDX81755 | Canola | cytosol | 19.78 | 18.21 |
| CDY33062 | Canola | mitochondrion, plastid | 22.01 | 18.16 |
| CDY24045 | Canola | mitochondrion | 22.01 | 18.16 |
| CDY64883 | Canola | golgi, plastid | 20.61 | 18.0 |
| CDY46430 | Canola | cytosol | 21.17 | 17.84 |
| CDY52764 | Canola | cytosol | 20.89 | 17.65 |
| CDY16205 | Canola | nucleus | 20.61 | 17.49 |
| CDY01300 | Canola | cytosol | 10.86 | 17.41 |
| CDY60836 | Canola | cytosol | 18.38 | 17.37 |
| CDY17172 | Canola | cytosol | 6.96 | 17.36 |
| CDX81631 | Canola | nucleus | 19.78 | 17.36 |
| CDY62015 | Canola | nucleus | 20.06 | 17.35 |
| CDY31534 | Canola | cytosol | 18.11 | 17.33 |
| CDX80156 | Canola | cytosol | 18.11 | 17.15 |
| CDY49094 | Canola | nucleus | 20.06 | 16.98 |
| CDX96822 | Canola | extracellular, vacuole | 20.33 | 16.9 |
| CDY00415 | Canola | mitochondrion | 10.03 | 16.82 |
| CDY33754 | Canola | nucleus | 11.7 | 16.8 |
| CDX96551 | Canola | cytosol | 18.66 | 16.5 |
| CDY17425 | Canola | cytosol | 18.38 | 16.46 |
| CDY45190 | Canola | nucleus | 20.61 | 16.34 |
| CDY03028 | Canola | cytosol | 20.33 | 16.26 |
| CDX73096 | Canola | cytosol | 18.11 | 16.21 |
| CDY33348 | Canola | cytosol | 8.08 | 16.11 |
| CDY54825 | Canola | cytosol | 8.64 | 16.06 |
| CDX68177 | Canola | cytosol | 17.83 | 15.35 |
| CDY09349 | Canola | nucleus | 18.94 | 15.32 |
| CDY62176 | Canola | nucleus | 18.94 | 15.21 |
| CDX85842 | Canola | cytosol | 17.83 | 14.99 |
| CDY28493 | Canola | cytosol | 16.99 | 14.84 |
| CDY33755 | Canola | cytosol | 5.01 | 14.63 |
| CDY34175 | Canola | cytosol | 16.71 | 14.6 |
| CDY70379 | Canola | cytosol | 6.41 | 14.56 |
| CDY52395 | Canola | cytosol | 17.55 | 14.55 |
| CDY66938 | Canola | cytosol, mitochondrion | 6.96 | 14.2 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 13.93 | 14.16 |
| CDY15707 | Canola | cytosol, plastid | 13.93 | 14.16 |
| CDX82682 | Canola | cytosol | 12.26 | 14.06 |
| CDY13683 | Canola | cytosol | 16.71 | 13.86 |
| CDY49979 | Canola | cytosol | 14.76 | 12.99 |
| CDY69929 | Canola | cytosol | 15.04 | 12.95 |
| CDX90239 | Canola | cytosol | 14.21 | 12.85 |
| CDY65956 | Canola | cytosol | 6.69 | 12.77 |
| CDY63005 | Canola | cytosol | 14.76 | 12.71 |
| CDY53460 | Canola | cytosol | 6.13 | 12.5 |
| CDY36146 | Canola | cytosol | 14.48 | 12.47 |
| CDY35075 | Canola | cytosol | 6.13 | 11.96 |
| CDY12345 | Canola | cytosol | 14.48 | 11.43 |
| CDY64780 | Canola | cytosol | 13.37 | 11.06 |
| CDY49977 | Canola | cytosol | 14.21 | 10.85 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078INQ4 | EnsemblPlants:CDY51562 | ProteinID:CDY51562 | ProteinID:CDY51562.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00003747001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24414 | PANTHER:PTHR24414:SF40 | SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 |
| UniParc:UPI0004EEDE08 | SEG:seg | : | : | : | : |
Description
BnaCnng20910DBnaCnng20910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INQ4]
Coordinates
chrLK033006:+:38900..40524
Molecular Weight (calculated)
40191.3 Da
IEP (calculated)
7.337
GRAVY (calculated)
-0.044
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MERIVHESTN ERADQSKETQ TSLISGVPDD ISNLFLARVP RSHHMAMKCV SRRWRDFISS DDFCDYRNKS NLAESWIYAL CRHNTCGRVF LHVLNPSSSR
101: RSWRRVHEIP THITFRDGMG FAVLGKRLFV LGGCGWVEGA SDDVYCYDAA MNTWLHLQPS LSTRRCFFAC ETLDGKIMAI GGLGVNSKAP QTWDIYDPVT
201: KACVSFSDAN IVRDIEDSFV MDGKVYVRGG VGAVVYDGLS GVWKRVEDDM ASGWLGPAVV VGDDLYVFDQ SFGATLTMWC KETRVWIRIG KLSQLVMTQQ
301: CRLVAMGSNI FVIGKDCSTV VIDVENVRKK TVNGVMVCSS IPKTWDDTID VICCKSIAI
101: RSWRRVHEIP THITFRDGMG FAVLGKRLFV LGGCGWVEGA SDDVYCYDAA MNTWLHLQPS LSTRRCFFAC ETLDGKIMAI GGLGVNSKAP QTWDIYDPVT
201: KACVSFSDAN IVRDIEDSFV MDGKVYVRGG VGAVVYDGLS GVWKRVEDDM ASGWLGPAVV VGDDLYVFDQ SFGATLTMWC KETRVWIRIG KLSQLVMTQQ
301: CRLVAMGSNI FVIGKDCSTV VIDVENVRKK TVNGVMVCSS IPKTWDDTID VICCKSIAI
001: MACIVEDPQR AGQSNETQIA LISGVPDDIS KSCLARVPRE YHMAMKCVSR RWRDFVCSDE MCDYRNEFNL AESWIYALCR DISGGVFLHM LNPFSSRRSW
101: KRINDYPYIP MREGMGFAVL GKRLFVLGGC GWLEDATDEI YCYDAAMNTW FDVVPPLSTK RCYFACETLD GKIIAIGGLG LNPNAKRTWD IYDPLTRTCK
201: SCSDVNIVPE MEDSFVMDGR IYIRGGVGGS STAVYSASSG IWERMDDDMA SGWRGPAVVV AGDLYVLDQT FGAKLTMWCK DTRMWIHIGK LSQLVMKQPC
301: RLVSIGNSIF VIGKDCSTVV IDVENVRKNK MNGVMVCSSI PKTWDDDIDV ISCKSVAI
101: KRINDYPYIP MREGMGFAVL GKRLFVLGGC GWLEDATDEI YCYDAAMNTW FDVVPPLSTK RCYFACETLD GKIIAIGGLG LNPNAKRTWD IYDPLTRTCK
201: SCSDVNIVPE MEDSFVMDGR IYIRGGVGGS STAVYSASSG IWERMDDDMA SGWRGPAVVV AGDLYVLDQT FGAKLTMWCK DTRMWIHIGK LSQLVMKQPC
301: RLVSIGNSIF VIGKDCSTVV IDVENVRKNK MNGVMVCSSI PKTWDDDIDV ISCKSVAI
Arabidopsis Description
SKIP4F-box/kelch-repeat protein SKIP4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.