Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010942.1-P | Field mustard | plastid | 98.55 | 98.55 |
| CDY11811 | Canola | plastid | 97.39 | 97.39 |
| AT1G27420.1 | Thale cress | cytosol, plastid | 86.38 | 86.13 |
| CDY15708 | Canola | cytosol | 69.86 | 70.26 |
| CDY66857 | Canola | cytosol | 72.46 | 70.22 |
| CDY36145 | Canola | cytosol | 69.86 | 68.86 |
| CDY70128 | Canola | cytosol | 66.96 | 68.55 |
| CDY52247 | Canola | cytosol | 62.9 | 67.81 |
| CDY54825 | Canola | cytosol | 36.23 | 64.77 |
| CDY03923 | Canola | cytosol | 62.9 | 64.2 |
| CDY64382 | Canola | plastid | 63.48 | 64.04 |
| CDY15707 | Canola | cytosol, plastid | 54.49 | 53.26 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 44.35 | 43.34 |
| CDY12647 | Canola | cytosol | 39.13 | 37.29 |
| CDY01812 | Canola | cytosol | 38.55 | 35.66 |
| CDX96091 | Canola | cytosol | 38.26 | 35.39 |
| CDY64883 | Canola | golgi, plastid | 38.26 | 32.12 |
| CDY26117 | Canola | cytosol | 25.51 | 20.23 |
| CDY08233 | Canola | mitochondrion | 25.51 | 20.23 |
| CDY35074 | Canola | cytosol | 12.17 | 20.1 |
| CDY02451 | Canola | cytosol | 25.22 | 20.0 |
| CDY10574 | Canola | cytosol | 25.22 | 20.0 |
| CDY51562 | Canola | cytosol | 20.29 | 19.5 |
| CDY24045 | Canola | mitochondrion | 24.35 | 19.31 |
| CDY33062 | Canola | mitochondrion, plastid | 24.35 | 19.31 |
| CDX99248 | Canola | cytosol | 19.42 | 19.25 |
| CDY58793 | Canola | cytosol | 20.0 | 19.22 |
| CDY01301 | Canola | cytosol | 8.7 | 19.11 |
| CDX99882 | Canola | mitochondrion, plastid | 22.03 | 19.1 |
| CDX82306 | Canola | cytosol | 19.13 | 19.08 |
| CDY26295 | Canola | mitochondrion, plastid | 21.74 | 18.84 |
| CDY22982 | Canola | cytosol | 18.84 | 18.79 |
| CDY18573 | Canola | cytosol | 18.84 | 18.68 |
| CDY58259 | Canola | cytosol | 18.55 | 18.44 |
| CDX81755 | Canola | cytosol | 19.71 | 17.44 |
| CDX76807 | Canola | cytosol | 18.55 | 17.34 |
| CDY31534 | Canola | cytosol | 18.84 | 17.33 |
| CDY33348 | Canola | cytosol | 8.99 | 17.22 |
| CDX80156 | Canola | cytosol | 18.84 | 17.15 |
| CDY34765 | Canola | cytosol | 18.26 | 16.94 |
| CDY34175 | Canola | cytosol | 19.71 | 16.55 |
| CDY28493 | Canola | cytosol | 19.71 | 16.55 |
| CDY46430 | Canola | cytosol | 20.29 | 16.43 |
| CDY16205 | Canola | nucleus | 20.0 | 16.31 |
| CDY52764 | Canola | cytosol | 20.0 | 16.24 |
| CDY33754 | Canola | nucleus | 11.59 | 16.0 |
| CDX96822 | Canola | extracellular, vacuole | 20.0 | 15.97 |
| CDY01300 | Canola | cytosol | 10.14 | 15.62 |
| CDY60836 | Canola | cytosol | 17.1 | 15.53 |
| CDY17425 | Canola | cytosol | 17.97 | 15.46 |
| CDY65956 | Canola | cytosol | 8.41 | 15.43 |
| CDY17172 | Canola | cytosol | 6.38 | 15.28 |
| CDY62176 | Canola | nucleus | 19.42 | 14.99 |
| CDX73096 | Canola | cytosol | 17.39 | 14.96 |
| CDY62015 | Canola | nucleus | 17.97 | 14.94 |
| CDY49094 | Canola | nucleus | 18.26 | 14.86 |
| CDY30645 | Canola | nucleus | 9.57 | 14.8 |
| CDY04697 | Canola | cytosol | 9.57 | 14.8 |
| CDY13683 | Canola | cytosol | 18.55 | 14.78 |
| CDX96551 | Canola | cytosol | 17.39 | 14.78 |
| CDY09349 | Canola | nucleus | 18.84 | 14.64 |
| CDX68177 | Canola | cytosol | 17.68 | 14.63 |
| CDY45190 | Canola | nucleus | 19.13 | 14.57 |
| CDY03028 | Canola | cytosol | 18.84 | 14.48 |
| CDY52395 | Canola | cytosol | 17.97 | 14.32 |
| CDX85842 | Canola | cytosol | 17.68 | 14.29 |
| CDX81631 | Canola | nucleus | 16.81 | 14.18 |
| CDY00415 | Canola | mitochondrion | 8.7 | 14.02 |
| CDX90239 | Canola | cytosol | 15.94 | 13.85 |
| CDX82682 | Canola | cytosol | 12.46 | 13.74 |
| CDY53460 | Canola | cytosol | 6.96 | 13.64 |
| CDY49979 | Canola | cytosol | 15.94 | 13.48 |
| CDY63005 | Canola | cytosol | 16.23 | 13.43 |
| CDY70379 | Canola | cytosol | 6.09 | 13.29 |
| CDY36146 | Canola | cytosol | 15.94 | 13.19 |
| CDY69929 | Canola | cytosol | 15.94 | 13.19 |
| CDY64780 | Canola | cytosol | 15.94 | 12.67 |
| CDY66938 | Canola | cytosol, mitochondrion | 6.38 | 12.5 |
| CDY12345 | Canola | cytosol | 15.94 | 12.09 |
| CDY49977 | Canola | cytosol | 14.2 | 10.43 |
| CDY35075 | Canola | cytosol | 4.93 | 9.24 |
| CDY33755 | Canola | cytosol | 2.9 | 8.13 |
Protein Annotations
| EnsemblPlants:CDX90085 | EnsemblPlantsGene:GSBRNA2T00150601001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 |
| PFAM:PF01344 | ProteinID:CDX90085 | ProteinID:CDX90085.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 |
| SUPFAM:SSF81383 | UniParc:UPI0004EDE695 | MapMan:35.1 | : | : | : |
Description
BnaA08g18990D
Coordinates
chrLK031862:+:6940..8309
Molecular Weight (calculated)
38988.1 Da
IEP (calculated)
6.298
GRAVY (calculated)
-0.258
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSPSSLIP GLTDDAAELC LSRTPRSNFR TISQVCRRWR TFLRSEHFAS VRELTGTVEE FMCVLMESEC GRDVYWEVFD ASGNKLGQIP PVPGPMKRGF
101: GVAVLGGGKI VFVGGYTEVE GSSSINSTIV SASADVYEFD PASNRWRKLA GMNIPRYNFA FAVVNGLLYV IRGYSTDAYS LSNSEVYNPE TNRWSLMDCP
201: NRPVWRGFAF SFKSKLFAVG NGSRFIDIYD PKTETWEELD SEQSISVYSY TVVRNKVYFM DRNMPGRLGV FDPEENYWSS VGVPPRAGGF WFRLGEWNNK
301: VLLFSRVCGH ETLMYDLDKE TGSRWRVCDQ IKPSASHLTS VLINF
101: GVAVLGGGKI VFVGGYTEVE GSSSINSTIV SASADVYEFD PASNRWRKLA GMNIPRYNFA FAVVNGLLYV IRGYSTDAYS LSNSEVYNPE TNRWSLMDCP
201: NRPVWRGFAF SFKSKLFAVG NGSRFIDIYD PKTETWEELD SEQSISVYSY TVVRNKVYFM DRNMPGRLGV FDPEENYWSS VGVPPRAGGF WFRLGEWNNK
301: VLLFSRVCGH ETLMYDLDKE TGSRWRVCDQ IKPSASHLTS VLINF
001: MVVESSSSPI IPGLTDDVAE LCVSKIPRSS FQITSQVCRR WRSFLRSQHF AAVRKLTGTV EEFLCVLMES ECGRDVYWEV FDASGNKLGQ IPPVPGPLKR
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF
Arabidopsis Description
Putative F-box/kelch-repeat protein At1g27420 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZJ3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.