Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96551 | Canola | cytosol | 90.52 | 89.41 |
| Bra015905.1-P | Field mustard | cytosol | 91.52 | 89.08 |
| CDX68177 | Canola | cytosol | 83.79 | 80.58 |
| CDX85842 | Canola | cytosol | 84.54 | 79.39 |
| AT1G74510.2 | Thale cress | cytosol | 86.28 | 76.72 |
| CDY70379 | Canola | cytosol | 28.68 | 72.78 |
| CDY33755 | Canola | cytosol | 16.46 | 53.66 |
| CDY60836 | Canola | cytosol | 47.63 | 50.26 |
| CDY46430 | Canola | cytosol | 53.37 | 50.23 |
| CDY52764 | Canola | cytosol | 52.87 | 49.88 |
| CDY16205 | Canola | nucleus | 52.37 | 49.65 |
| CDY62015 | Canola | nucleus | 51.12 | 49.4 |
| CDX81631 | Canola | nucleus | 50.37 | 49.39 |
| CDY49094 | Canola | nucleus | 51.12 | 48.35 |
| CDY62176 | Canola | nucleus | 53.62 | 48.1 |
| CDY09349 | Canola | nucleus | 53.12 | 47.97 |
| CDY17425 | Canola | cytosol | 47.63 | 47.63 |
| CDY03028 | Canola | cytosol | 52.62 | 46.99 |
| CDY45190 | Canola | nucleus | 52.87 | 46.8 |
| CDY33754 | Canola | nucleus | 26.93 | 43.2 |
| CDY31534 | Canola | cytosol | 37.41 | 40.0 |
| CDX80156 | Canola | cytosol | 37.16 | 39.31 |
| CDY66938 | Canola | cytosol, mitochondrion | 15.21 | 34.66 |
| CDY53460 | Canola | cytosol | 14.71 | 33.52 |
| CDY65956 | Canola | cytosol | 15.46 | 32.98 |
| CDX82682 | Canola | cytosol | 25.69 | 32.91 |
| CDY34175 | Canola | cytosol | 30.42 | 29.68 |
| CDY28493 | Canola | cytosol | 29.93 | 29.2 |
| CDY13683 | Canola | cytosol | 31.42 | 29.1 |
| CDY52395 | Canola | cytosol | 30.67 | 28.41 |
| CDY63005 | Canola | cytosol | 28.68 | 27.58 |
| CDY36146 | Canola | cytosol | 28.43 | 27.34 |
| CDY69929 | Canola | cytosol | 28.43 | 27.34 |
| CDX90239 | Canola | cytosol | 26.93 | 27.2 |
| CDY64780 | Canola | cytosol | 29.43 | 27.19 |
| CDY49979 | Canola | cytosol | 26.68 | 26.23 |
| CDY12345 | Canola | cytosol | 29.68 | 26.15 |
| CDY22982 | Canola | cytosol | 18.2 | 21.1 |
| CDX99248 | Canola | cytosol | 18.2 | 20.98 |
| CDX82306 | Canola | cytosol | 17.96 | 20.81 |
| CDY18573 | Canola | cytosol | 17.96 | 20.69 |
| CDY58259 | Canola | cytosol | 17.71 | 20.46 |
| CDY12647 | Canola | cytosol | 17.96 | 19.89 |
| CDY49977 | Canola | cytosol | 23.19 | 19.79 |
| CDX96091 | Canola | cytosol | 18.2 | 19.57 |
| CDY01812 | Canola | cytosol | 17.96 | 19.3 |
| CDX81755 | Canola | cytosol | 18.45 | 18.97 |
| CDY01301 | Canola | cytosol | 7.23 | 18.47 |
| CDY33348 | Canola | cytosol | 8.23 | 18.33 |
| CDY51562 | Canola | cytosol | 16.21 | 18.11 |
| CDY54825 | Canola | cytosol | 8.48 | 17.62 |
| CDY30645 | Canola | nucleus | 9.73 | 17.49 |
| CDY04697 | Canola | cytosol | 9.73 | 17.49 |
| CDY01300 | Canola | cytosol | 9.73 | 17.41 |
| CDY35075 | Canola | cytosol | 7.98 | 17.39 |
| CDX90085 | Canola | plastid | 14.96 | 17.39 |
| CDY58793 | Canola | cytosol | 15.46 | 17.27 |
| CDX96822 | Canola | extracellular, vacuole | 18.45 | 17.13 |
| CDY26295 | Canola | mitochondrion, plastid | 16.96 | 17.09 |
| CDX99882 | Canola | mitochondrion, plastid | 16.96 | 17.09 |
| CDY64883 | Canola | golgi, plastid | 17.46 | 17.03 |
| CDY52247 | Canola | cytosol | 13.47 | 16.88 |
| CDY66857 | Canola | cytosol | 14.96 | 16.85 |
| CDY00415 | Canola | mitochondrion | 8.98 | 16.82 |
| CDY11811 | Canola | plastid | 14.46 | 16.81 |
| CDX76807 | Canola | cytosol | 15.46 | 16.8 |
| CDY64382 | Canola | plastid | 14.21 | 16.67 |
| CDY15708 | Canola | cytosol | 14.21 | 16.62 |
| CDY03923 | Canola | cytosol | 13.97 | 16.57 |
| CDY70128 | Canola | cytosol | 13.72 | 16.32 |
| CDY36145 | Canola | cytosol | 14.21 | 16.29 |
| CDY35074 | Canola | cytosol | 8.48 | 16.27 |
| CDY34765 | Canola | cytosol | 14.96 | 16.13 |
| CDY17172 | Canola | cytosol | 5.74 | 15.97 |
| CDY24045 | Canola | mitochondrion | 17.21 | 15.86 |
| CDY33062 | Canola | mitochondrion, plastid | 16.96 | 15.63 |
| CDY10574 | Canola | cytosol | 16.46 | 15.17 |
| CDY02451 | Canola | cytosol | 16.46 | 15.17 |
| CDY26117 | Canola | cytosol | 16.46 | 15.17 |
| CDY08233 | Canola | mitochondrion | 16.21 | 14.94 |
| CDY15707 | Canola | cytosol, plastid | 10.47 | 11.9 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 8.98 | 10.2 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EnsemblPlants:CDX73096 | ProteinID:CDX73096 | ProteinID:CDX73096.1 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00103560001 | InterPro:IPR001810 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 | PANTHER:PTHR24413 |
| PANTHER:PTHR24413:SF133 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EF130C | SEG:seg |
Description
BnaC06g35440D
Coordinates
chrLK031797:+:2068454..2070483
Molecular Weight (calculated)
44392.1 Da
IEP (calculated)
7.224
GRAVY (calculated)
-0.173
Length
401 amino acids
Sequence
(BLAST)
(BLAST)
001: MLETPSYLVS RDLPSSCQEE IKSIYNAQHY MFQLYLKKRL LDNDDTHGQQ GGGDQQSSPV TLLDQNALLN CLAHCSLSDF KSIASTSKTF RSLIKDSELY
101: RLRRAKGIVE HWIYFSCRLL EWEAYDPNGD RWLRVTKMTF NECFMCSDKE SLAVGTELLV FGKEITSHVI YKYSILTNTR TSGMQMNTPR CLFGSASLGE
201: VAFIAGGCDP SGRILSSAEV YNSERGEWTV IPSMNKARKM CSSVFMDGSF YVIGGIGEGN SEILMCGDVY DLKKRTWTLI PNISSSSAMA ASAAPPLVAV
301: VKDELYAASY EQQEVRRYDK GCNVWNKVGN LPERASSMNG WGMAFRACGD QLVVVGGPRA LGGGFIEINA CVPRDGEALR WRVLASKPSG SFVYNCAVMG
401: C
101: RLRRAKGIVE HWIYFSCRLL EWEAYDPNGD RWLRVTKMTF NECFMCSDKE SLAVGTELLV FGKEITSHVI YKYSILTNTR TSGMQMNTPR CLFGSASLGE
201: VAFIAGGCDP SGRILSSAEV YNSERGEWTV IPSMNKARKM CSSVFMDGSF YVIGGIGEGN SEILMCGDVY DLKKRTWTLI PNISSSSAMA ASAAPPLVAV
301: VKDELYAASY EQQEVRRYDK GCNVWNKVGN LPERASSMNG WGMAFRACGD QLVVVGGPRA LGGGFIEINA CVPRDGEALR WRVLASKPSG SFVYNCAVMG
401: C
001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLRKRLL DDTDVEGSSA KKMLRVDHGS RGESDKITDS LQLAKTYQSS NQSQQGGGGD QQSSPVTRLD
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
Arabidopsis Description
F-box/kelch-repeat protein At1g74510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA63]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.