Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008155.1-P | Field mustard | cytosol | 81.01 | 43.1 |
| CDX96551 | Canola | cytosol | 75.32 | 29.31 |
| CDX73096 | Canola | cytosol | 72.78 | 28.68 |
| CDX68177 | Canola | cytosol | 75.32 | 28.54 |
| CDX85842 | Canola | cytosol | 75.32 | 27.87 |
| AT1G74510.2 | Thale cress | cytosol | 74.05 | 25.94 |
| CDY33755 | Canola | cytosol | 17.72 | 22.76 |
| CDY60836 | Canola | cytosol | 50.0 | 20.79 |
| CDY62015 | Canola | nucleus | 51.9 | 19.76 |
| CDY17425 | Canola | cytosol | 50.0 | 19.7 |
| CDX81631 | Canola | nucleus | 50.63 | 19.56 |
| CDY49094 | Canola | nucleus | 51.9 | 19.34 |
| CDY46430 | Canola | cytosol | 51.27 | 19.01 |
| CDY16205 | Canola | nucleus | 50.63 | 18.91 |
| CDY52764 | Canola | cytosol | 50.63 | 18.82 |
| CDY31534 | Canola | cytosol | 43.67 | 18.4 |
| CDY45190 | Canola | nucleus | 52.53 | 18.32 |
| CDY03028 | Canola | cytosol | 51.9 | 18.26 |
| CDX80156 | Canola | cytosol | 43.67 | 18.21 |
| CDY62176 | Canola | nucleus | 51.27 | 18.12 |
| CDY09349 | Canola | nucleus | 50.0 | 17.79 |
| CDY33754 | Canola | nucleus | 27.22 | 17.2 |
| CDX82682 | Canola | cytosol | 27.85 | 14.06 |
| CDY34175 | Canola | cytosol | 31.65 | 12.17 |
| CDY28493 | Canola | cytosol | 31.65 | 12.17 |
| CDY13683 | Canola | cytosol | 31.01 | 11.32 |
| CDY65956 | Canola | cytosol | 13.29 | 11.17 |
| CDY52395 | Canola | cytosol | 30.38 | 11.09 |
| CDY64780 | Canola | cytosol | 29.75 | 10.83 |
| CDY66938 | Canola | cytosol, mitochondrion | 12.03 | 10.8 |
| CDY69929 | Canola | cytosol | 28.48 | 10.79 |
| CDY36146 | Canola | cytosol | 28.48 | 10.79 |
| CDY63005 | Canola | cytosol | 28.48 | 10.79 |
| CDY01300 | Canola | cytosol | 15.19 | 10.71 |
| CDY12345 | Canola | cytosol | 30.38 | 10.55 |
| CDY58259 | Canola | cytosol | 22.78 | 10.37 |
| CDY18573 | Canola | cytosol | 22.78 | 10.34 |
| CDY00415 | Canola | mitochondrion | 13.92 | 10.28 |
| CDY53460 | Canola | cytosol | 11.39 | 10.23 |
| CDX82306 | Canola | cytosol | 22.15 | 10.12 |
| CDY22982 | Canola | cytosol | 21.52 | 9.83 |
| CDY49979 | Canola | cytosol | 25.32 | 9.8 |
| CDX99248 | Canola | cytosol | 21.52 | 9.77 |
| CDX90239 | Canola | cytosol | 23.42 | 9.32 |
| CDY33348 | Canola | cytosol | 10.13 | 8.89 |
| CDY12647 | Canola | cytosol | 19.62 | 8.56 |
| CDY08233 | Canola | mitochondrion | 23.42 | 8.51 |
| CDX96091 | Canola | cytosol | 19.62 | 8.31 |
| CDY26117 | Canola | cytosol | 22.78 | 8.28 |
| CDX76807 | Canola | cytosol | 18.99 | 8.13 |
| CDY24045 | Canola | mitochondrion | 22.15 | 8.05 |
| CDY02451 | Canola | cytosol | 22.15 | 8.05 |
| CDY10574 | Canola | cytosol | 22.15 | 8.05 |
| CDY01812 | Canola | cytosol | 18.99 | 8.04 |
| CDY33062 | Canola | mitochondrion, plastid | 21.52 | 7.82 |
| CDY34765 | Canola | cytosol | 18.35 | 7.8 |
| CDY64883 | Canola | golgi, plastid | 19.62 | 7.54 |
| CDX81755 | Canola | cytosol | 18.35 | 7.44 |
| CDY70128 | Canola | cytosol | 15.82 | 7.42 |
| CDY66857 | Canola | cytosol | 16.46 | 7.3 |
| CDX99882 | Canola | mitochondrion, plastid | 17.09 | 6.78 |
| CDY26295 | Canola | mitochondrion, plastid | 17.09 | 6.78 |
| CDY54825 | Canola | cytosol | 8.23 | 6.74 |
| CDX96822 | Canola | extracellular, vacuole | 18.35 | 6.71 |
| CDY35075 | Canola | cytosol | 7.59 | 6.52 |
| CDY64382 | Canola | plastid | 13.92 | 6.43 |
| CDY51562 | Canola | cytosol | 14.56 | 6.41 |
| CDY58793 | Canola | cytosol | 14.56 | 6.41 |
| CDY36145 | Canola | cytosol | 13.92 | 6.29 |
| CDY15708 | Canola | cytosol | 13.29 | 6.12 |
| CDY11811 | Canola | plastid | 13.29 | 6.09 |
| CDX90085 | Canola | plastid | 13.29 | 6.09 |
| CDY49977 | Canola | cytosol | 17.72 | 5.96 |
| CDY52247 | Canola | cytosol | 12.03 | 5.94 |
| CDY15707 | Canola | cytosol, plastid | 12.66 | 5.67 |
| CDY03923 | Canola | cytosol | 12.03 | 5.62 |
| CDY35074 | Canola | cytosol | 6.96 | 5.26 |
| CDY30645 | Canola | nucleus | 6.33 | 4.48 |
| CDY04697 | Canola | cytosol | 5.7 | 4.04 |
| CDY01301 | Canola | cytosol | 3.8 | 3.82 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 6.96 | 3.12 |
| CDY17172 | Canola | cytosol | 2.53 | 2.78 |
Protein Annotations
| EnsemblPlants:CDY70379 | EnsemblPlantsGene:GSBRNA2T00098450001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | PFAM:PF01344 |
| ProteinID:CDY70379 | ProteinID:CDY70379.1 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0004EF3DC0 |
| UniProt:A0A078JUC2 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng68080DBnaCnng68080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JUC2]
Coordinates
chrLK041930:+:654..2231
Molecular Weight (calculated)
17571.3 Da
IEP (calculated)
7.638
GRAVY (calculated)
0.015
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MTFNECFSCS DKESLAVGTE LLLFGKEVMS HVIYKYSVLT HAWTSNEYSE VLGEVAVVAG GCDPRGKILN SAEIYSLESG EWTVIPSMNK ARKMCSWTGA
101: SMLLERETRR CLCVVRGVGR RTIEINACVP REGKSLHWRV LASKPSESFV YNCVVMGC
101: SMLLERETRR CLCVVRGVGR RTIEINACVP REGKSLHWRV LASKPSESFV YNCVVMGC
001: MLEAPSYLVS RDLPSSCEEE SKWIYNAHCV LQLSLRKRLL DDTDVEGSSA KKMLRVDHGS RGESDKITDS LQLAKTYQSS NQSQQGGGGD QQSSPVTRLD
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
101: QNALLNCLAH CSLSDFGSIA STNRTFRSLI KDSELYRLRR AKGIVEHWIY FSCRLLEWEA YDPNGDRWLR VPKMTFNECF MCSDKESLAV GTELLVFGKE
201: IMSHVIYRYS ILTNTWTSGM QMNVPRCLFG SASLGEIAVI AGGCDPRGRI LSSAELYNSE TGEWTVIPSM NKARKMCSSV FMDGNFYCIG GIGEGNSKML
301: LCGEVYDLKK KTWTLIPNML PERSSGGGGD QAKEIAAATA ASEAPPLVAV VKDELYAANY AQQEVKKYDK RLNVWNKVGN LPERASSMNG WGMAFRACGD
401: QLVVVGGPRA IGGGFIEINA CVPSEGTQLH WRVLASKPSG NFVYNCAVMG C
Arabidopsis Description
F-box/kelch-repeat protein At1g74510 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA63]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.