Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96091 | Canola | cytosol | 96.78 | 96.78 |
| CDY12647 | Canola | cytosol | 86.33 | 88.95 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 86.6 | 85.9 |
| CDY64883 | Canola | golgi, plastid | 86.06 | 78.1 |
| VIT_01s0010g03320.t01 | Wine grape | cytosol | 65.68 | 63.64 |
| KRG97442 | Soybean | cytosol, nucleus, peroxisome | 61.93 | 62.43 |
| KRH31463 | Soybean | cytosol | 63.81 | 61.82 |
| KRH42654 | Soybean | cytosol | 64.08 | 61.6 |
| Zm00001d016553_P001 | Maize | cytosol | 53.35 | 54.67 |
| Os02t0504900-01 | Rice | cytosol | 55.76 | 54.03 |
| EES06854 | Sorghum | cytosol | 54.42 | 53.0 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 53.89 | 52.34 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 54.42 | 52.05 |
| Os04t0380300-01 | Rice | plastid | 52.01 | 51.73 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 52.55 | 51.31 |
| HORVU3Hr1G096780.1 | Barley | cytosol, plastid | 52.55 | 50.91 |
| TraesCS3D01G439000.1 | Wheat | cytosol | 52.01 | 50.52 |
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 51.47 | 49.87 |
| TraesCS3B01G481500.1 | Wheat | cytosol, plastid | 51.21 | 49.74 |
| TraesCS2D01G279700.1 | Wheat | mitochondrion | 50.94 | 49.61 |
| TraesCS2A01G280900.1 | Wheat | mitochondrion | 50.13 | 48.83 |
| TraesCS2B01G298300.1 | Wheat | mitochondrion | 49.87 | 48.56 |
| HORVU2Hr1G068790.2 | Barley | cytosol | 49.6 | 48.18 |
| OQU81371 | Sorghum | mitochondrion | 48.26 | 47.75 |
| CDY15708 | Canola | cytosol | 36.19 | 39.36 |
| CDX90085 | Canola | plastid | 35.66 | 38.55 |
| CDY11811 | Canola | plastid | 35.66 | 38.55 |
| CDY03923 | Canola | cytosol | 33.51 | 36.98 |
| CDY64382 | Canola | plastid | 33.51 | 36.55 |
| CDY52247 | Canola | cytosol | 30.83 | 35.94 |
| CDY66857 | Canola | cytosol | 34.05 | 35.67 |
| CDY70128 | Canola | cytosol | 32.17 | 35.61 |
| CDY36145 | Canola | cytosol | 31.9 | 34.0 |
| CDY15707 | Canola | cytosol, plastid | 29.49 | 31.16 |
| CDY54825 | Canola | cytosol | 15.55 | 30.05 |
| CDY03921 | Canola | cytosol, extracellular, plasma membrane | 24.4 | 25.78 |
| CDX99248 | Canola | cytosol | 22.52 | 24.14 |
| CDX82306 | Canola | cytosol | 21.18 | 22.83 |
| CDY22982 | Canola | cytosol | 21.18 | 22.83 |
| CDX99882 | Canola | mitochondrion, plastid | 24.13 | 22.61 |
| CDY35074 | Canola | cytosol | 12.6 | 22.49 |
| CDY26295 | Canola | mitochondrion, plastid | 23.86 | 22.36 |
| CDY01301 | Canola | cytosol | 9.38 | 22.29 |
| CDY18573 | Canola | cytosol | 20.64 | 22.13 |
| CDY08233 | Canola | mitochondrion | 25.74 | 22.07 |
| CDY26117 | Canola | cytosol | 25.74 | 22.07 |
| CDY58259 | Canola | cytosol | 20.11 | 21.61 |
| CDY02451 | Canola | cytosol | 25.2 | 21.61 |
| CDY10574 | Canola | cytosol | 25.2 | 21.61 |
| CDY24045 | Canola | mitochondrion | 25.2 | 21.61 |
| CDY33062 | Canola | mitochondrion, plastid | 24.93 | 21.38 |
| CDY51562 | Canola | cytosol | 20.11 | 20.89 |
| CDY17172 | Canola | cytosol | 8.04 | 20.83 |
| CDY58793 | Canola | cytosol | 19.84 | 20.61 |
| CDY31534 | Canola | cytosol | 20.64 | 20.53 |
| CDX80156 | Canola | cytosol | 20.64 | 20.32 |
| CDX81755 | Canola | cytosol | 21.18 | 20.26 |
| CDY30645 | Canola | nucleus | 12.06 | 20.18 |
| CDY04697 | Canola | cytosol | 11.8 | 19.73 |
| CDY70379 | Canola | cytosol | 8.04 | 18.99 |
| CDY33348 | Canola | cytosol | 9.12 | 18.89 |
| CDX76807 | Canola | cytosol | 18.5 | 18.7 |
| CDY16205 | Canola | nucleus | 21.18 | 18.68 |
| CDX96822 | Canola | extracellular, vacuole | 21.45 | 18.52 |
| CDY33754 | Canola | nucleus | 12.33 | 18.4 |
| CDY46430 | Canola | cytosol | 20.91 | 18.31 |
| CDY60836 | Canola | cytosol | 18.5 | 18.16 |
| CDY52764 | Canola | cytosol | 20.64 | 18.12 |
| CDY34765 | Canola | cytosol | 17.96 | 18.01 |
| CDX73096 | Canola | cytosol | 19.3 | 17.96 |
| CDY62015 | Canola | nucleus | 19.57 | 17.59 |
| CDY65956 | Canola | cytosol | 8.85 | 17.55 |
| CDX68177 | Canola | cytosol | 19.57 | 17.51 |
| CDY00415 | Canola | mitochondrion | 9.92 | 17.29 |
| CDY34175 | Canola | cytosol | 19.03 | 17.27 |
| CDY49094 | Canola | nucleus | 19.57 | 17.22 |
| CDY17425 | Canola | cytosol | 18.5 | 17.21 |
| CDX81631 | Canola | nucleus | 18.77 | 17.11 |
| CDX85842 | Canola | cytosol | 19.57 | 17.1 |
| CDX96551 | Canola | cytosol | 18.5 | 17.0 |
| CDY01300 | Canola | cytosol | 10.19 | 16.96 |
| CDY28493 | Canola | cytosol | 18.5 | 16.79 |
| CDY09349 | Canola | nucleus | 19.84 | 16.67 |
| CDY62176 | Canola | nucleus | 19.84 | 16.55 |
| CDX82682 | Canola | cytosol | 13.4 | 15.97 |
| CDY45190 | Canola | nucleus | 19.3 | 15.89 |
| CDY03028 | Canola | cytosol | 19.03 | 15.81 |
| CDX90239 | Canola | cytosol | 16.35 | 15.37 |
| CDY13683 | Canola | cytosol | 17.69 | 15.24 |
| CDY52395 | Canola | cytosol | 17.16 | 14.78 |
| CDY49979 | Canola | cytosol | 16.09 | 14.71 |
| CDY63005 | Canola | cytosol | 16.09 | 14.39 |
| CDY36146 | Canola | cytosol | 15.82 | 14.15 |
| CDY69929 | Canola | cytosol | 15.82 | 14.15 |
| CDY12345 | Canola | cytosol | 16.89 | 13.85 |
| CDY64780 | Canola | cytosol | 16.09 | 13.82 |
| CDY66938 | Canola | cytosol, mitochondrion | 6.43 | 13.64 |
| CDY35075 | Canola | cytosol | 6.17 | 12.5 |
| CDY53460 | Canola | cytosol | 5.63 | 11.93 |
| CDY33755 | Canola | cytosol | 3.75 | 11.38 |
| CDY49977 | Canola | cytosol | 13.94 | 11.06 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EnsemblPlants:CDY01812 | ProteinID:CDY01812 | ProteinID:CDY01812.1 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00112966001 | InterPro:IPR001810 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00646 | PFAM:PF01344 | PANTHER:PTHR24412 |
| PANTHER:PTHR24412:SF377 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EE48E7 | SEG:seg |
Description
BnaC06g28520D
Coordinates
chrLK031929:+:501058..503328
Molecular Weight (calculated)
40705.9 Da
IEP (calculated)
7.764
GRAVY (calculated)
-0.070
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAFVSGKKR VVVSNGMCFS KDNLDLGSEN YGDDPLIPGL SDDVAKMCLA LVPRASFPSM GRVCKKWRYV VKSKEFITVR RLAGMLEEWL YVLTTKAGGK
101: ESHWEVMDCQ GHKLSSLPPI PGPAKTGFKV VVVDGKLLVV AGCALINGSL VASSDVYQFD TCLNSWSKLD DLKEARYEFA CAEVNGLVYV VGGHGVDGES
201: LSSAEVYDPE TGVWTFIESL RRPRWGCFAS GFNGKLYVMG GRSNFTIGNS KLVDVYNPQC GSWCGNKNGL TMVTAHVEVG KKLFCIDWKN QRKMSVFNAE
301: DETWEVVALP LSGSSRAGFQ FGKLNGKLLL FSSQEEAGRS TLLYDPDAAP GKQWMTSEIK LSGPCVCSVT ITA
101: ESHWEVMDCQ GHKLSSLPPI PGPAKTGFKV VVVDGKLLVV AGCALINGSL VASSDVYQFD TCLNSWSKLD DLKEARYEFA CAEVNGLVYV VGGHGVDGES
201: LSSAEVYDPE TGVWTFIESL RRPRWGCFAS GFNGKLYVMG GRSNFTIGNS KLVDVYNPQC GSWCGNKNGL TMVTAHVEVG KKLFCIDWKN QRKMSVFNAE
301: DETWEVVALP LSGSSRAGFQ FGKLNGKLLL FSSQEEAGRS TLLYDPDAAP GKQWMTSEIK LSGPCVCSVT ITA
001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
Arabidopsis Description
F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.