Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G280900.1 | Wheat | mitochondrion | 93.99 | 93.99 |
| TraesCS2B01G298300.1 | Wheat | mitochondrion | 93.21 | 93.21 |
| HORVU2Hr1G068790.2 | Barley | cytosol | 90.6 | 90.36 |
| Os04t0380300-01 | Rice | plastid | 67.89 | 69.33 |
| TraesCS3D01G439000.1 | Wheat | cytosol | 67.89 | 67.71 |
| OQU81371 | Sorghum | mitochondrion | 65.01 | 66.05 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 56.92 | 56.77 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 56.4 | 56.54 |
| VIT_01s0010g03320.t01 | Wine grape | cytosol | 56.66 | 56.36 |
| KRH42654 | Soybean | cytosol | 56.14 | 55.41 |
| KRG97442 | Soybean | cytosol, nucleus, peroxisome | 52.74 | 54.59 |
| KRH31463 | Soybean | cytosol | 53.26 | 52.99 |
| CDY12647 | Canola | cytosol | 49.61 | 52.49 |
| Bra033998.1-P | Field mustard | cytosol | 49.35 | 52.21 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 52.74 | 51.79 |
| Bra004227.1-P | Field mustard | cytosol | 50.13 | 51.47 |
| CDX96091 | Canola | cytosol | 50.13 | 51.47 |
| CDY01812 | Canola | cytosol | 49.61 | 50.94 |
| AT1G67480.1 | Thale cress | cytosol, mitochondrion | 49.35 | 50.27 |
| CDY64883 | Canola | golgi, plastid | 49.61 | 46.23 |
| TraesCS6D01G195800.1 | Wheat | cytosol | 23.24 | 25.21 |
| TraesCS6D01G167900.1 | Wheat | plastid | 24.28 | 21.99 |
| TraesCS4D01G282200.1 | Wheat | cytosol | 23.5 | 21.58 |
| TraesCS6D01G043400.1 | Wheat | cytosol | 21.41 | 21.47 |
| TraesCS2D01G499800.1 | Wheat | mitochondrion | 22.45 | 21.23 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 18.28 | 21.21 |
| TraesCS7D01G483900.1 | Wheat | cytosol | 20.89 | 20.89 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 11.49 | 20.47 |
| TraesCS3D01G540000.1 | Wheat | cytosol | 22.72 | 20.37 |
| TraesCS1D01G136700.1 | Wheat | nucleus | 24.54 | 20.13 |
| TraesCS7D01G016400.1 | Wheat | cytosol, plastid | 22.72 | 19.08 |
| TraesCS6D01G285100.1 | Wheat | cytosol, nucleus, plastid | 19.32 | 17.41 |
| TraesCS2D01G463000.1 | Wheat | cytosol | 19.32 | 16.55 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 15.93 | 16.4 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G279700.1 | EnsemblPlantsGene:TraesCS2D01G279700 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | InterPro:Kelch_2 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF377 |
| PFAM:PF01344 | PFAM:PF07646 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 |
Description
No Description!
Coordinates
chr2D:-:351380963..351382215
Molecular Weight (calculated)
41831.2 Da
IEP (calculated)
8.715
GRAVY (calculated)
-0.168
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MLALVGAREP LVQPQTCQRG TVPLKSLARP RLSSVTMTEK ETNTHDGLIP GLPEDMAKIC LALVPRRHFP SMGAVSRRWM SFIDSREFSA VRKEVGKIEG
101: LVYVLAAEAG EKGCRWEVLG ERKNSAIPPM PGLTKAGFGV VVLYGKLYVI AGYAAVHGKD SVSDEVYQYD ARLNRWGALA KMNVARRDFA CAEVDGTIYA
201: AGGFGSSGNS LSSVEAYDPQ QNRWTLIDGL RRPRWGCFAS GLNSKLYIMG GRSSFTIGNS RFVDVYDPGR SRWEEIKRGC VMVTSHAVVG ESLFCVEWKN
301: QRCLSAFDPS DSSWKKIPVP LTGSSSTRFC LGARGGKLLL LSQEEEGGYW TMTYDPAAAP GSEWGTSELK PSGLCLCSVT IQV
101: LVYVLAAEAG EKGCRWEVLG ERKNSAIPPM PGLTKAGFGV VVLYGKLYVI AGYAAVHGKD SVSDEVYQYD ARLNRWGALA KMNVARRDFA CAEVDGTIYA
201: AGGFGSSGNS LSSVEAYDPQ QNRWTLIDGL RRPRWGCFAS GLNSKLYIMG GRSSFTIGNS RFVDVYDPGR SRWEEIKRGC VMVTSHAVVG ESLFCVEWKN
301: QRCLSAFDPS DSSWKKIPVP LTGSSSTRFC LGARGGKLLL LSQEEEGGYW TMTYDPAAAP GSEWGTSELK PSGLCLCSVT IQV
001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA
Arabidopsis Description
F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.