Factsheet for TraesCS2B01G298300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G280900.1	Wheat	mitochondrion	94.26	94.26
TraesCS2D01G279700.1	Wheat	mitochondrion	93.21	93.21
HORVU2Hr1G068790.2	Barley	cytosol	89.56	89.32
Os04t0380300-01	Rice	plastid	66.58	68.0
TraesCS3B01G481500.1	Wheat	cytosol, plastid	66.06	65.89
OQU81371	Sorghum	mitochondrion	64.49	65.52
VIT_01s0010g03320.t01	Wine grape	cytosol	56.4	56.1
GSMUA_Achr8P28270_001	Banana	cytosol	55.61	55.47
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	55.09	55.24
KRH42654	Soybean	cytosol	55.61	54.9
KRG97442	Soybean	cytosol, nucleus, peroxisome	52.74	54.59
KRH31463	Soybean	cytosol	53.26	52.99
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	52.48	51.54
CDY12647	Canola	cytosol	48.3	51.1
Bra033998.1-P	Field mustard	cytosol	48.04	50.83
CDX96091	Canola	cytosol	49.09	50.4
Bra004227.1-P	Field mustard	cytosol	49.09	50.4
CDY01812	Canola	cytosol	48.56	49.87
AT1G67480.1	Thale cress	cytosol, mitochondrion	48.3	49.2
CDY64883	Canola	golgi, plastid	48.3	45.01
TraesCS7B01G234000.1	Wheat	cytosol	21.67	25.0
TraesCS6B01G243200.1	Wheat	cytosol	22.45	24.36
TraesCS6B01G052900.2	Wheat	cytosol	21.67	21.73
TraesCS1B01G154600.1	Wheat	plastid	24.54	21.46
TraesCS4B01G283400.1	Wheat	cytosol	23.76	21.16
TraesCS4B01G283500.1	Wheat	cytosol	23.5	20.88
TraesCS3B01G611700.1	Wheat	cytosol	22.45	20.14
TraesCS6B01G209700.1	Wheat	cytosol	21.67	19.62
TraesCS6B01G227500.1	Wheat	cytosol, peroxisome, plastid	21.67	18.04
TraesCS6B01G334300.1	Wheat	cytosol, nucleus, plastid	18.54	16.71
TraesCS2B01G484200.1	Wheat	cytosol	18.02	15.37

Protein Annotations

EnsemblPlants:TraesCS2B01G298300.1	EnsemblPlantsGene:TraesCS2B01G298300	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	InterPro:Kelch_2	PANTHER:PTHR24412	PANTHER:PTHR24412:SF377
PFAM:PF01344	PFAM:PF07646	SMART:SM00612	SUPFAM:SSF117281	MapMan:35.1	:

Description

No Description!

Coordinates

chr2B:-:417771522..417776465

Molecular Weight (calculated)

41916.6 Da

IEP (calculated)

8.627

GRAVY (calculated)

-0.141

Length

383 amino acids

Sequence
(BLAST)

001: MLALVGAREA LVQAQTCHRG IMPLKSLARP RLSPVTMTEK ETNTHDGLIP GLPEDMAKIC LALVPRRHFP AMGAVSRRWM SYIGSREFSA VRKEVRKIEE
101: LVYVLAAEAG EKGCRWEVLG ERKNSAIPPM PGLAKVGFGV VVLYGKLCVI AGYAALHGKD SVSDEVYQYD ARLNRWGALA KMNVARRDFA CAEVDGTIYA
201: AGGFGCSGHS LSSVEAYDPQ QNRWRLIDGL RRPRWGCFAC GLDSKLYIMG GRSSFTIGNS RFVDVYDPGR DRWEEIKRGC VMATSHAVVG ETLFCVEWKN
301: QRCLSAFSPS DGSWKKIPVP LTGSSSTRFC LGARGGKLLL LSQEEEGGYQ TMTYDPAAAP GSEWGTSELK PSGLCLCSVT IQV

Best Arabidopsis Sequence Match ( AT1G27420.1 )
(BLAST)

001: MVVESSSSPI IPGLTDDVAE LCVSKIPRSS FQITSQVCRR WRSFLRSQHF AAVRKLTGTV EEFLCVLMES ECGRDVYWEV FDASGNKLGQ IPPVPGPLKR
101: GFGVAVLDGG KIVFFGGYTE VEGSGINSTT VSASADVYEF DPANNSWRKL AGMNIPRYNF AFAEVNGLLY VIRGYSTDTY SLSNAEVYNP KTNQWSLMHC
201: PNRPVWRGFA FAFSSKLYAV GNGSRFIDIY DPKTQTWEEL NSEQSVSVYS YTVVRNKVYF MDRNMPGRLG VFDPEENSWS SVFVPPREGG FWVRLGVWNN
301: KVLLFSRVCG HETLMYDLDK EKGSKWRVCD QIKPSASQLA SVLINF

Arabidopsis Description

Putative F-box/kelch-repeat protein At1g27420 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZJ3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.