Factsheet for Bra033998.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12647	Canola	cytosol	98.89	98.89
Bra004227.1-P	Field mustard	cytosol	88.12	85.52
AT1G67480.1	Thale cress	cytosol, mitochondrion	85.08	81.91
VIT_01s0010g03320.t01	Wine grape	cytosol	68.78	64.68
KRG97442	Soybean	cytosol, nucleus, peroxisome	63.81	62.43
KRH31463	Soybean	cytosol	65.47	61.56
KRH42654	Soybean	cytosol	65.47	61.08
Zm00001d016553_P001	Maize	cytosol	55.8	55.49
Os02t0504900-01	Rice	cytosol	58.29	54.81
GSMUA_Achr8P28270_001	Banana	cytosol	56.91	53.65
EES06854	Sorghum	cytosol	56.63	53.52
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	55.8	52.88
Os04t0380300-01	Rice	plastid	53.87	52.0
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	55.8	51.79
HORVU3Hr1G096780.1	Barley	cytosol, plastid	54.14	50.91
TraesCS3D01G439000.1	Wheat	cytosol	53.59	50.52
TraesCS3A01G446400.1	Wheat	cytosol, plastid	53.31	50.13
TraesCS3B01G481500.1	Wheat	cytosol, plastid	53.04	50.0
TraesCS2D01G279700.1	Wheat	mitochondrion	52.21	49.35
TraesCS2A01G280900.1	Wheat	mitochondrion	51.1	48.3
OQU81371	Sorghum	mitochondrion	50.28	48.28
TraesCS2B01G298300.1	Wheat	mitochondrion	50.83	48.04
HORVU2Hr1G068790.2	Barley	cytosol	50.83	47.92
Bra010942.1-P	Field mustard	plastid	37.02	38.84
Bra030046.1-P	Field mustard	cytosol, plastid	30.66	31.44
Bra030045.1-P	Field mustard	cytosol	36.19	27.81
Bra026073.1-P	Field mustard	cytosol	13.81	24.15
Bra001739.1-P	Field mustard	cytosol	22.65	23.7
Bra037535.1-P	Field mustard	cytosol	22.38	23.34
Bra030872.1-P	Field mustard	cytosol	26.8	22.3
Bra005497.1-P	Field mustard	cytosol	8.84	22.22
Bra032358.1-P	Field mustard	mitochondrion, plastid	24.31	22.11
Bra011908.1-P	Field mustard	mitochondrion	26.52	22.07
Bra037989.1-P	Field mustard	cytosol, plastid	26.24	21.84
Bra002471.1-P	Field mustard	cytosol	22.1	21.33
Bra031360.1-P	Field mustard	plastid	14.09	20.9
Bra003447.1-P	Field mustard	cytosol	20.44	20.61
Bra012304.1-P	Field mustard	cytosol	25.69	19.91
Bra007843.1-P	Field mustard	cytosol	19.34	18.82
Bra008155.1-P	Field mustard	cytosol	14.64	17.85
Bra016297.1-P	Field mustard	cytosol	20.72	17.61
Bra026838.1-P	Field mustard	nucleus	19.61	17.44
Bra003796.1-P	Field mustard	cytosol	20.44	17.33
Bra015905.1-P	Field mustard	cytosol	19.61	17.23
Bra032983.1-P	Field mustard	cytosol	19.34	17.03
Bra026575.1-P	Field mustard	nucleus	20.44	16.67
Bra017407.1-P	Field mustard	nucleus, plastid	19.61	16.17
Bra024801.1-P	Field mustard	nucleus	19.89	15.89
Bra010784.1-P	Field mustard	cytosol	16.3	14.86
Bra025251.1-P	Field mustard	cytosol	17.4	14.55
Bra032052.1-P	Field mustard	cytosol	6.63	13.64
Bra034944.1-P	Field mustard	cytosol	15.19	13.45

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra033998	EnsemblPlants:Bra033998.1	EnsemblPlants:Bra033998.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4EYV6	PFAM:PF00646	PFAM:PF01344	PANTHER:PTHR24412
PANTHER:PTHR24412:SF377	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0002545F16

Description

AT1G67480 (E=2e-177) | kelch repeat-containing F-box family protein

Coordinates

chrA02:+:10342536..10344098

Molecular Weight (calculated)

39613.8 Da

IEP (calculated)

7.998

GRAVY (calculated)

-0.037

Length

362 amino acids

Sequence
(BLAST)

001: MEAVVSGKKR MVNLDLSSRL LSEPLIPGLS DDVAKLCLAL VPRSSLPSMG RVCKKWRYVV QSKEFITVRR LAGMPEEWLY VLTMDAGGKE SHWEVMDCLG
101: HKLSSLPPMP GPVKTGFKVV VVDGKLLVIA GCAMISGSHV ASSDVYQFDT CLNSWSRLAD LKEARYDFAC AEVNGLVYVV GGHGGDGESL SSAEVYDPET
201: GVWTFIQSLR RPRWGCFASG FNGKLYVMGG RSNFTIGNSK LVDVYNPQCG SWCGRKNGVT MVTAHVEVGK KLFCMEWKNQ RKMYVFNAED DTWEVVALPL
301: SGSSSAGFQF GKLNGKLLLF SSQEETGHST LLYDPEAAPG RQWKTSEIKL SGSCVCSVTI IA

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.