Factsheet for HORVU3Hr1G096780.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G446400.1	Wheat	cytosol, plastid	94.29	94.29
TraesCS3D01G439000.1	Wheat	cytosol	93.51	93.75
TraesCS3B01G481500.1	Wheat	cytosol, plastid	93.51	93.75
Zm00001d016553_P001	Maize	cytosol	77.14	81.59
EES06854	Sorghum	cytosol	80.26	80.68
Os02t0504900-01	Rice	cytosol	80.52	80.52
GSMUA_Achr8P28270_001	Banana	cytosol	63.12	63.28
HORVU2Hr1G068790.2	Barley	cytosol	62.86	63.02
VIT_01s0010g03320.t01	Wine grape	cytosol	62.86	62.86
GSMUA_Achr3P16120_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	61.04	61.52
KRG97442	Soybean	cytosol, nucleus, peroxisome	58.18	60.54
KRH31463	Soybean	cytosol	60.26	60.26
KRH42654	Soybean	cytosol	60.52	60.05
GSMUA_Achr6P20750_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	56.1	55.38
CDY12647	Canola	cytosol	50.91	54.14
Bra033998.1-P	Field mustard	cytosol	50.91	54.14
CDX96091	Canola	cytosol	51.95	53.62
Bra004227.1-P	Field mustard	cytosol	51.43	53.08
CDY01812	Canola	cytosol	50.91	52.55
AT1G67480.1	Thale cress	cytosol, mitochondrion	51.17	52.39
CDY64883	Canola	golgi, plastid	51.17	47.93
HORVU6Hr1G007030.1	Barley	cytosol	20.52	22.83
HORVU2Hr1G057150.1	Barley	cytosol	10.65	22.04
HORVU2Hr1G057140.1	Barley	cytosol	10.65	22.04
HORVU4Hr1G074720.7	Barley	plasma membrane	24.68	21.64
HORVU6Hr1G037850.2	Barley	plastid	23.64	21.36
HORVU1Hr1G035200.1	Barley	plasma membrane	25.19	20.42
HORVU6Hr1G052010.1	Barley	cytosol	22.34	18.7
HORVU7Hr1G002140.2	Barley	mitochondrion	22.6	18.24
HORVU3Hr1G116690.2	Barley	mitochondrion	22.86	18.07
HORVU6Hr1G075590.1	Barley	cytosol, nucleus, plastid	19.74	17.88
HORVU4Hr1G075310.1	Barley	cytosol	19.74	17.31
HORVU2Hr1G103880.2	Barley	cytosol	18.96	16.37
HORVU7Hr1G000010.5	Barley	cytosol	17.4	15.3
HORVU6Hr1G007080.1	Barley	cytosol	3.38	14.94
HORVU7Hr1G000070.1	Barley	cytosol	17.14	12.57

Protein Annotations

EnsemblPlants:HORVU3Hr1G096780.1	EnsemblPlantsGene:HORVU3Hr1G096780	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24412	PANTHER:PTHR24412:SF377	PFAM:PF01344
SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00029575A9	UniProt:M0Z7A0	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr3H:+:654496084..654499680

Molecular Weight (calculated)

42334.9 Da

IEP (calculated)

7.438

GRAVY (calculated)

-0.107

Length

385 amino acids

Sequence
(BLAST)

001: MVTIVGTREQ FVQPQSCLRA TMQLKSPTRP KLSFCFTPQG DCDQYCALIP GLPEDLAKIC LALVPRTHFP VMGGVSKRWM SFLESKELIA VRKEVRKLDE
101: CVYVLTTDAG AKGSHWEVLG CQGQKNTPLP PMPGPTKAGF GVVVLDGKLV VIAGYAADHG KECVSDEVYQ YDCFLNRWTA ISKMNVARCD FACAEVNGVI
201: YVAGGFGPDG DSLSSIEVYD PEQNKWALIG RLRRPRWGCF GCSFEDKMYV MGGRSSFTIG NSRFIDVYDT NSGAWGEFRN GCVMVTAHAV LGEKLFCIEW
301: KNQRSLAIFN PADNSWQKVP VPLTGSSSTR FSLGTHDGKL LLFSLEEEPG YQTLMYDPAA PTGSEWCKST LRPSGSCLCS VTIKA

Best Arabidopsis Sequence Match ( AT1G67480.3 )
(BLAST)

001: MQAFALSGKK RIVNHGMCFS KGNLDLGSRL SENFMDDPLI PGLPDDVAKQ CLALVPRARF PSMGSVCKKW RFVVQSKEFI TVRRLAGMLE EWLYVLTMNA
101: GGKDNRWEVM DCLGQKLSSL PPMPGPAKTG FKVVVVDGKL LVIAGCCMIN GSLVASADVY QYDTCLNSWS RLADLEVARY DFACAEVNGH VYVVGGHGVD
201: GESLSSAEVY DPETCTWTFI ESLRRPRWGC FASAFNGKLY VMGGRSNFTI GNSKLLDVYN TQCGSWHGSK NGLTMVTAHV EVGKKLFCID WKNHRKMSVF
301: NAEDETWEVV ALPLSGSSRA GFQFGKLSGK LLLFSSQEET GQCTLLYDPD ASPGTQWKTS EIKLSGSCVC SVTITA

Arabidopsis Description

F-box/kelch-repeat protein At1g67480 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAG8]
SUBAcon: [cytosol,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.