Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G005100.1 | Wheat | cytosol | 39.95 | 81.4 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 46.8 | 79.46 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 65.3 | 74.29 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 31.28 | 73.66 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 31.28 | 73.66 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 63.24 | 72.7 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 62.56 | 72.49 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 76.26 | 63.62 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 60.05 | 55.49 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 65.3 | 54.37 |
| Os03t0171600-01 | Rice | cytosol | 52.51 | 53.36 |
| Zm00001d048310_P001 | Maize | cytosol | 51.83 | 53.04 |
| KXG40080 | Sorghum | cytosol | 51.83 | 53.04 |
| HORVU4Hr1G075310.1 | Barley | cytosol | 52.97 | 52.85 |
| Zm00001d027856_P001 | Maize | cytosol | 51.14 | 52.21 |
| HORVU6Hr1G075590.1 | Barley | cytosol, nucleus, plastid | 44.52 | 45.88 |
| GSMUA_Achr1P21630_001 | Banana | cytosol | 38.58 | 44.83 |
| CDY33755 | Canola | cytosol | 12.33 | 43.9 |
| Solyc04g005670.1.1 | Tomato | cytosol | 40.18 | 43.56 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 37.44 | 43.16 |
| VIT_17s0000g05920.t01 | Wine grape | cytosol | 43.38 | 42.89 |
| Bra026838.1-P | Field mustard | nucleus | 39.5 | 42.51 |
| CDX81631 | Canola | nucleus | 39.27 | 42.05 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 15.07 | 41.77 |
| KRH54527 | Soybean | cytosol | 42.01 | 41.72 |
| Solyc03g113010.1.1 | Tomato | cytosol | 42.01 | 41.72 |
| CDY60836 | Canola | cytosol | 36.07 | 41.58 |
| CDY62015 | Canola | nucleus | 39.27 | 41.45 |
| PGSC0003DMT400007346 | Potato | nucleus | 40.87 | 41.34 |
| KRH63378 | Soybean | cytosol | 41.32 | 41.04 |
| CDY49094 | Canola | nucleus | 39.5 | 40.8 |
| GSMUA_Achr10P... | Banana | nucleus | 40.41 | 40.69 |
| KRH03453 | Soybean | cytosol | 37.9 | 40.69 |
| AT1G14330.1 | Thale cress | nucleus | 40.64 | 40.36 |
| PGSC0003DMT400046591 | Potato | extracellular | 42.01 | 40.35 |
| GSMUA_Achr8P17960_001 | Banana | nucleus | 37.9 | 39.9 |
| Bra026575.1-P | Field mustard | nucleus | 40.41 | 39.86 |
| CDY09349 | Canola | nucleus | 40.18 | 39.64 |
| Solyc04g005870.1.1 | Tomato | cytosol | 4.79 | 39.62 |
| CDY62176 | Canola | nucleus | 40.41 | 39.6 |
| Bra017407.1-P | Field mustard | nucleus, plastid | 39.5 | 39.41 |
| CDY17425 | Canola | cytosol | 36.07 | 39.4 |
| AT1G26930.1 | Thale cress | cytosol | 37.67 | 39.19 |
| KRH56929 | Soybean | cytosol | 36.07 | 38.82 |
| CDY52764 | Canola | cytosol | 36.99 | 38.12 |
| CDY03028 | Canola | cytosol | 39.04 | 38.08 |
| CDY46430 | Canola | cytosol | 36.99 | 38.03 |
| Bra024801.1-P | Field mustard | nucleus | 39.27 | 37.97 |
| CDY45190 | Canola | nucleus | 39.27 | 37.97 |
| Bra016297.1-P | Field mustard | cytosol | 36.76 | 37.79 |
| AT2G02870.1 | Thale cress | nucleus | 40.18 | 37.69 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 41.1 | 37.66 |
| CDY16205 | Canola | nucleus | 35.62 | 36.88 |
| PGSC0003DMT400059324 | Potato | cytosol | 39.04 | 35.62 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 41.78 | 35.4 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 39.5 | 35.38 |
| CDY33754 | Canola | nucleus | 20.09 | 35.2 |
| HORVU2Hr1G103880.2 | Barley | cytosol | 35.62 | 34.98 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 42.24 | 34.2 |
| KRH45883 | Soybean | cytosol | 40.64 | 33.02 |
| KRH74828 | Soybean | cytosol | 40.41 | 32.96 |
| KRG99114 | Soybean | cytosol | 40.41 | 32.84 |
| KRH70694 | Soybean | cytosol | 40.41 | 32.84 |
| PGSC0003DMT400007391 | Potato | cytosol | 8.9 | 29.1 |
| Solyc05g007220.2.1 | Tomato | nucleus | 38.81 | 26.4 |
| HORVU4Hr1G074720.7 | Barley | plasma membrane | 19.86 | 19.82 |
| HORVU6Hr1G052010.1 | Barley | cytosol | 19.86 | 18.91 |
| HORVU6Hr1G037850.2 | Barley | plastid | 18.26 | 18.78 |
| HORVU1Hr1G035200.1 | Barley | plasma membrane | 20.32 | 18.74 |
| HORVU3Hr1G116690.2 | Barley | mitochondrion | 20.09 | 18.07 |
| HORVU2Hr1G068790.2 | Barley | cytosol | 15.75 | 17.97 |
| HORVU6Hr1G007030.1 | Barley | cytosol | 14.16 | 17.92 |
| HORVU3Hr1G096780.1 | Barley | cytosol, plastid | 15.3 | 17.4 |
| HORVU7Hr1G002140.2 | Barley | mitochondrion | 18.04 | 16.56 |
| HORVU6Hr1G007080.1 | Barley | cytosol | 2.97 | 14.94 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G000010.5 | EnsemblPlantsGene:HORVU7Hr1G000010 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF133 | PFAM:PF01344 |
| SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI000B485419 | UniProt:A0A287VAQ7 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr7H:+:2..6300
Molecular Weight (calculated)
48260.9 Da
IEP (calculated)
6.596
GRAVY (calculated)
-0.332
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: YRHGNALISI EHMTGLREVS AKFGGAAADL QYVSRIGIVS NHQSNPIVEV KLVDSGSHVD KRISSRSPES SSRLNPPGML LSCAVVSWSN TIDVIGRELF
101: IRCLHLVPRR DYGASIASLN REFNSVVRNG DIYRLRRKNG VAEHWLYLCC GNNNNPPEWD AYDPSTGRWI HVPKMPPSGS YFWDSLAVGT ELLLFGETGV
201: ALRYSILTNS WTGLPDADAI NTPRYLFGAA SGGEKAYVAG GLDSSRTNAL SSAEMYDSET HTWTPLPSMN RARYGCSGAF MDGKFYVIGG VSSTSSREPL
301: TCGEEYDLNL RSWRVIDNMS QGLNETVDGA PPLIAVVNNE LYGADYSENN DLKQYDKLDN KWITLGKLPV QSKNKDAFDM GFRACGDRLI VIGRPNNSTD
401: EKVVELHSWI PDGQPPVWNF VATRPYRGNG ILCAAMGC
101: IRCLHLVPRR DYGASIASLN REFNSVVRNG DIYRLRRKNG VAEHWLYLCC GNNNNPPEWD AYDPSTGRWI HVPKMPPSGS YFWDSLAVGT ELLLFGETGV
201: ALRYSILTNS WTGLPDADAI NTPRYLFGAA SGGEKAYVAG GLDSSRTNAL SSAEMYDSET HTWTPLPSMN RARYGCSGAF MDGKFYVIGG VSSTSSREPL
301: TCGEEYDLNL RSWRVIDNMS QGLNETVDGA PPLIAVVNNE LYGADYSENN DLKQYDKLDN KWITLGKLPV QSKNKDAFDM GFRACGDRLI VIGRPNNSTD
401: EKVVELHSWI PDGQPPVWNF VATRPYRGNG ILCAAMGC
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.