Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P21630_001 | Banana | cytosol | 73.56 | 81.17 |
| GSMUA_Achr8P01380_001 | Banana | cytosol | 67.07 | 73.42 |
| GSMUA_Achr10P... | Banana | nucleus | 68.99 | 65.98 |
| TraesCS4D01G286700.1 | Wheat | cytosol | 51.92 | 65.45 |
| GSMUA_Achr2P14920_001 | Banana | mitochondrion | 74.28 | 64.64 |
| GSMUA_Achr4P00520_001 | Banana | cytosol | 59.62 | 63.75 |
| Solyc04g005870.1.1 | Tomato | cytosol | 7.93 | 62.26 |
| GSMUA_Achr7P20970_001 | Banana | cytosol | 58.65 | 61.77 |
| CDY33755 | Canola | cytosol | 17.79 | 60.16 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 35.34 | 58.57 |
| GSMUA_Achr4P09990_001 | Banana | cytosol | 60.34 | 58.51 |
| GSMUA_Achr4P24130_001 | Banana | nucleus | 72.12 | 58.03 |
| GSMUA_Achr3P01570_001 | Banana | golgi | 66.35 | 56.44 |
| Os03t0171600-01 | Rice | cytosol | 57.45 | 55.45 |
| KXG40080 | Sorghum | cytosol | 56.73 | 55.14 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 56.73 | 54.76 |
| Zm00001d027856_P001 | Maize | cytosol | 56.25 | 54.55 |
| HORVU4Hr1G075310.1 | Barley | cytosol | 57.45 | 54.44 |
| Zm00001d048310_P001 | Maize | cytosol | 56.01 | 54.44 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 47.36 | 54.12 |
| Zm00001d014203_P001 | Maize | cytosol, nucleus, plastid | 56.01 | 52.6 |
| VIT_17s0000g05920.t01 | Wine grape | cytosol | 56.01 | 52.6 |
| TraesCS7D01G007100.1 | Wheat | cytosol | 46.63 | 52.15 |
| OQU91835 | Sorghum | cytosol, nucleus, plastid | 55.05 | 51.58 |
| Zm00001d033012_P001 | Maize | cytosol | 55.05 | 51.35 |
| KRH63378 | Soybean | cytosol | 54.33 | 51.25 |
| CDX81631 | Canola | nucleus | 50.0 | 50.86 |
| Bra026838.1-P | Field mustard | nucleus | 49.52 | 50.61 |
| CDY62015 | Canola | nucleus | 50.48 | 50.6 |
| KRH54527 | Soybean | cytosol | 53.37 | 50.34 |
| Solyc04g005670.1.1 | Tomato | cytosol | 48.8 | 50.25 |
| PGSC0003DMT400007346 | Potato | nucleus | 51.92 | 49.88 |
| Os11t0602800-01 | Rice | nucleus | 51.44 | 49.54 |
| CDY49094 | Canola | nucleus | 50.24 | 49.29 |
| AT1G14330.1 | Thale cress | nucleus | 50.96 | 48.07 |
| Solyc03g113010.1.1 | Tomato | cytosol | 50.96 | 48.07 |
| OQU83795 | Sorghum | cytosol | 51.44 | 47.98 |
| TraesCS7D01G005100.1 | Wheat | cytosol | 24.76 | 47.91 |
| Bra026575.1-P | Field mustard | nucleus | 50.96 | 47.75 |
| Zm00001d007596_P001 | Maize | nucleus, plastid | 50.48 | 47.62 |
| CDY09349 | Canola | nucleus | 50.72 | 47.52 |
| CDY62176 | Canola | nucleus | 50.96 | 47.43 |
| CDY60836 | Canola | cytosol | 43.27 | 47.37 |
| Zm00001d048898_P001 | Maize | cytosol | 49.28 | 47.13 |
| Bra017407.1-P | Field mustard | nucleus, plastid | 49.52 | 46.92 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 29.09 | 46.9 |
| KRH03453 | Soybean | cytosol | 45.91 | 46.81 |
| PGSC0003DMT400046591 | Potato | extracellular | 51.2 | 46.71 |
| CDY17425 | Canola | cytosol | 44.95 | 46.63 |
| AT2G02870.1 | Thale cress | nucleus | 51.92 | 46.25 |
| CDY03028 | Canola | cytosol | 49.28 | 45.66 |
| CDY45190 | Canola | nucleus | 49.52 | 45.47 |
| Bra024801.1-P | Field mustard | nucleus | 49.28 | 45.25 |
| AT1G26930.1 | Thale cress | cytosol | 45.67 | 45.13 |
| KRH56929 | Soybean | cytosol | 43.99 | 44.96 |
| PGSC0003DMT400059324 | Potato | cytosol | 51.68 | 44.79 |
| CDY16205 | Canola | nucleus | 45.19 | 44.44 |
| CDY46430 | Canola | cytosol | 45.19 | 44.13 |
| HORVU2Hr1G057150.1 | Barley | cytosol | 19.71 | 44.09 |
| HORVU2Hr1G057140.1 | Barley | cytosol | 19.71 | 44.09 |
| CDY52764 | Canola | cytosol | 44.95 | 44.0 |
| Bra016297.1-P | Field mustard | cytosol | 44.95 | 43.9 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 39.66 | 42.86 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 39.18 | 42.78 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 38.7 | 42.59 |
| CDY33754 | Canola | nucleus | 25.48 | 42.4 |
| PGSC0003DMT400007391 | Potato | cytosol | 13.46 | 41.79 |
| GSMUA_Achr3P23350_001 | Banana | cytosol, extracellular | 40.14 | 41.44 |
| VIT_01s0026g02080.t01 | Wine grape | nucleus | 52.88 | 40.67 |
| KRH70694 | Soybean | cytosol | 51.44 | 39.7 |
| KRH74828 | Soybean | cytosol | 51.2 | 39.66 |
| KRG99114 | Soybean | cytosol | 51.2 | 39.52 |
| KRH45883 | Soybean | cytosol | 50.48 | 38.96 |
| HORVU7Hr1G000010.5 | Barley | cytosol | 39.9 | 37.9 |
| GSMUA_Achr9P30470_001 | Banana | cytosol | 35.58 | 37.85 |
| GSMUA_Achr11P... | Banana | cytosol | 36.54 | 34.55 |
| HORVU7Hr1G000070.1 | Barley | cytosol | 41.35 | 32.76 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 40.87 | 32.32 |
| PGSC0003DMT400091785 | Potato | cytosol, mitochondrion, plastid | 12.26 | 32.28 |
| Solyc05g007220.2.1 | Tomato | nucleus | 49.04 | 31.68 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 32.93 | 28.9 |
| GSMUA_Achr6P04050_001 | Banana | cytosol | 19.95 | 18.24 |
| GSMUA_Achr6P24370_001 | Banana | cytosol | 14.9 | 17.87 |
| GSMUA_Achr4P20790_001 | Banana | extracellular | 16.11 | 17.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 14.42 | 16.81 |
| GSMUA_Achr7P08330_001 | Banana | cytosol | 15.87 | 16.75 |
| GSMUA_Achr8P28270_001 | Banana | cytosol | 14.9 | 16.15 |
| GSMUA_Achr7P27010_001 | Banana | cytosol | 16.11 | 16.11 |
| GSMUA_Achr10P... | Banana | cytosol | 19.71 | 15.77 |
| GSMUA_Achr3P29560_001 | Banana | cytosol | 15.38 | 15.57 |
| GSMUA_Achr2P17100_001 | Banana | cytosol, plastid | 14.9 | 15.2 |
| GSMUA_Achr3P16120_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 13.94 | 15.18 |
| GSMUA_Achr2P22090_001 | Banana | cytosol | 13.46 | 14.85 |
| GSMUA_Achr6P20750_001 | Banana | cytosol, mitochondrion, plasma membrane, plastid | 13.46 | 14.36 |
| GSMUA_Achr6P31190_001 | Banana | mitochondrion | 13.22 | 13.38 |
| GSMUA_Achr2P18470_001 | Banana | cytosol | 12.5 | 12.21 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 14.42 | 7.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P17960_001 | EnsemblPlants:GSMUA_Achr8T17960_001 | EnsemblPlantsGene:GSMUA_Achr8G17960_001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | ncoils:Coil | PANTHER:PTHR24413 |
| PANTHER:PTHR24413:SF133 | PFAM:PF01344 | SEG:seg | SUPFAM:SSF117281 | UniParc:UPI000296384E | UniProt:M0TRE9 |
| MapMan:35.1 | : | : | : | : | : |
Description
F-box/kelch-repeat protein SKIP11 [Source:GMGC_GENE;Acc:GSMUA_Achr8G17960_001]
Coordinates
chr8:+:20189694..20192080
Molecular Weight (calculated)
46820.2 Da
IEP (calculated)
4.903
GRAVY (calculated)
-0.385
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MLENDSDFIS RVIQSSSEQE SNWICVDYDF LESSGNKKRP LDEEVEEQEQ EDQVQVKRKK SPQHPDTPDI KDVQHALENS DNHGNDVDYN DPSTFINPLD
101: RELTISCLLH LSRSYYGTVA CINSSFCSLI RSGELYQLRR QMEIAEHWVY FSCSVLEWEA YDPYRACWIT VPKMPPTESF MCSDKESLAV GTDLLVFGRE
201: LNSYIVLRYS ILTNSWSPGV VMNSPRCLFG SASLGEKAIT LPSMNKARKM CSGVFMDRKF YVIGGMDSNK EMLTCGEEYD LARGSWRVIP NMSAGLNGAS
301: GAPPLVAVVN NDLYAAHYAD KEVRKYNKDN NAWVTLGKLP ERSVSVNGWG LAFRACGEWL IVIGGPRGSH GGIIELNSWI PNEGPPEWNM IASKHSGSFV
401: YNCAVNNWRQ PSILIN
101: RELTISCLLH LSRSYYGTVA CINSSFCSLI RSGELYQLRR QMEIAEHWVY FSCSVLEWEA YDPYRACWIT VPKMPPTESF MCSDKESLAV GTDLLVFGRE
201: LNSYIVLRYS ILTNSWSPGV VMNSPRCLFG SASLGEKAIT LPSMNKARKM CSGVFMDRKF YVIGGMDSNK EMLTCGEEYD LARGSWRVIP NMSAGLNGAS
301: GAPPLVAVVN NDLYAAHYAD KEVRKYNKDN NAWVTLGKLP ERSVSVNGWG LAFRACGEWL IVIGGPRGSH GGIIELNSWI PNEGPPEWNM IASKHSGSFV
401: YNCAVNNWRQ PSILIN
001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C
Arabidopsis Description
At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.