Factsheet for TraesCS4A01G493800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G004600.1	Wheat	cytosol	94.42	65.11
TraesCS4A01G487800.1	Wheat	cytosol	60.96	59.3
TraesCS7D01G007100.1	Wheat	cytosol	87.25	58.87
CDY33755	Canola	cytosol	25.9	52.85
KXG40080	Sorghum	cytosol	81.67	47.9
TraesCS4A01G016200.1	Wheat	cytosol	82.07	47.8
Os03t0171600-01	Rice	cytosol	80.88	47.1
Zm00001d048310_P001	Maize	cytosol	79.68	46.73
Zm00001d027856_P001	Maize	cytosol	78.88	46.15
Solyc04g005870.1.1	Tomato	cytosol	9.16	43.4
TraesCS4A01G492300.1	Wheat	cytosol, golgi, plastid	64.14	41.82
TraesCS4A01G489600.1	Wheat	cytosol	61.75	41.01
TraesCS4A01G489300.1	Wheat	cytosol	61.75	40.68
PGSC0003DMT400091785	Potato	cytosol, mitochondrion, plastid	25.5	40.51
GSMUA_Achr1P21630_001	Banana	cytosol	59.76	39.79
GSMUA_Achr8P01380_001	Banana	cytosol	59.36	39.21
Solyc04g005670.1.1	Tomato	cytosol	61.75	38.37
TraesCS6A01G306000.1	Wheat	cytosol	64.54	38.12
VIT_17s0000g05920.t01	Wine grape	cytosol	65.74	37.25
CDX81631	Canola	nucleus	60.16	36.92
Bra026838.1-P	Field mustard	nucleus	59.76	36.85
CDY62015	Canola	nucleus	60.56	36.63
KRH03453	Soybean	cytosol	58.96	36.27
PGSC0003DMT400007346	Potato	nucleus	62.15	36.03
CDY49094	Canola	nucleus	60.56	35.85
CDY60836	Canola	cytosol	54.18	35.79
AT1G14330.1	Thale cress	nucleus	62.55	35.6
AT1G26930.1	Thale cress	cytosol	59.36	35.39
KRH54527	Soybean	cytosol	62.15	35.37
KRH63378	Soybean	cytosol	62.15	35.37
Solyc03g113010.1.1	Tomato	cytosol	62.15	35.37
GSMUA_Achr8P17960_001	Banana	nucleus	58.57	35.34
KRH56929	Soybean	cytosol	56.97	35.14
CDY46430	Canola	cytosol	58.96	34.74
GSMUA_Achr10P...	Banana	nucleus	60.16	34.71
Bra016297.1-P	Field mustard	cytosol	58.57	34.51
Bra017407.1-P	Field mustard	nucleus, plastid	60.16	34.4
CDY52764	Canola	cytosol	58.17	34.35
Bra026575.1-P	Field mustard	nucleus	60.56	34.23
PGSC0003DMT400046591	Potato	extracellular	62.15	34.21
CDY16205	Canola	nucleus	57.37	34.04
CDY09349	Canola	nucleus	60.16	34.01
CDY62176	Canola	nucleus	60.56	34.0
CDY17425	Canola	cytosol	53.78	33.67
Bra024801.1-P	Field mustard	nucleus	60.16	33.33
CDY45190	Canola	nucleus	60.16	33.33
CDY03028	Canola	cytosol	59.36	33.18
AT2G02870.1	Thale cress	nucleus	61.35	32.98
PGSC0003DMT400007391	Potato	cytosol	17.13	32.09
GSMUA_Achr2P14920_001	Banana	mitochondrion	60.56	31.8
PGSC0003DMT400059324	Potato	cytosol	59.76	31.25
GSMUA_Achr3P01570_001	Banana	golgi	59.76	30.67
GSMUA_Achr4P24130_001	Banana	nucleus	61.75	29.98
KRH74828	Soybean	cytosol	63.74	29.8
KRH70694	Soybean	cytosol	63.35	29.5
KRG99114	Soybean	cytosol	63.35	29.5
KRH45883	Soybean	cytosol	63.35	29.5
TraesCS2A01G462600.1	Wheat	cytosol	52.59	29.4
TraesCS4A01G491100.1	Wheat	cytosol	60.96	29.09
VIT_01s0026g02080.t01	Wine grape	nucleus	62.15	28.84
TraesCS4A01G493200.1	Wheat	cytosol, plasma membrane	44.22	23.42
Solyc05g007220.2.1	Tomato	nucleus	56.97	22.2
CDY33754	Canola	nucleus	21.51	21.6
TraesCS6A01G211500.1	Wheat	extracellular, golgi	19.92	16.23
TraesCS5A01G544300.1	Wheat	extracellular, plasma membrane	16.33	14.34
TraesCS3A01G446400.1	Wheat	cytosol, plastid	21.12	13.77
TraesCS6A01G037900.1	Wheat	cytosol	19.52	13.5
TraesCS3A01G534600.1	Wheat	cytosol	23.11	13.46
TraesCS2A01G499700.1	Wheat	cytosol, mitochondrion	20.32	12.81
TraesCS4A01G020200.1	Wheat	cytosol	21.51	12.56
TraesCS7A01G496600.1	Wheat	cytosol	19.12	12.47
TraesCS4A01G472100.1	Wheat	cytosol	22.71	12.45
TraesCS6A01G175700.1	Wheat	plastid	20.72	12.29
TraesCS2A01G280900.1	Wheat	mitochondrion	18.33	12.01
TraesCS7A01G020100.1	Wheat	cytosol, plastid	21.51	11.84

Protein Annotations

EnsemblPlants:TraesCS4A01G493800.1	EnsemblPlantsGene:TraesCS4A01G493800	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR24413	PANTHER:PTHR24413:SF133	PFAM:PF01344
SMART:SM00612	SUPFAM:SSF117281	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:-:742138157..742138912

Molecular Weight (calculated)

27713.1 Da

IEP (calculated)

7.215

GRAVY (calculated)

-0.235

Length

251 amino acids

Sequence
(BLAST)

001: MCSDKESLAV GTELLVFGMA HIVYRYSILT NSWTRADPMN SPRCLFGSTS VGEKAYVAGG SDSCGRILSS AEMYDLETHT WTPLPCMNKT RKLCSGTFMD
101: GKFYVIGGVT NNNKVLACGE EYDLERRSWR VIDNMSEGLD GMAGAPPLIA AVNNQLYAAD YSDKDVKRYD KLNNRWITLG KLPEQCVSND SWGIAFRACG
201: DRLIVIGGPR TYTGGTIEIH SWIPDQQPPG WNLVAKRSSK SFVYNLAVMG C

Best Arabidopsis Sequence Match ( AT1G14330.1 )
(BLAST)

001: MVEDRTYLMS RIFSSSRLSE SKWPYMYPQP EDSSESNLIN GKRALENDVD ELRQSKSPRL MGFSIHGNEA IEEDEQEQDQ SDSNNNGNSD GDSLINDIGR
101: DNSISCLIRC SRSGYGSIAS LNRSFRSLVK TGEIYRLRRQ NQIVEHWVYF SCQLLEWVAF NPFERRWMNL PTMPSGVTFM CADKESLAVG TDLLVLGKDD
201: YSSHVIYRYS LLTNSWSSGM RMNSPRCLFG SASLGEIAIF AGGFDSFGKI SDSAEMYNSE LQTWTTLPKM NKPRKMCSGV FMDGKFYVIG GIGGNDSKVL
301: TCGEEFDLET KKWTEIPEMS PPRSREMPAA AEAPPLVAVV NNELYAADHA DMEVRKYDKE SKKWFTLGRL PERADSVNGW GLAFRACGER LIVIGGPRSS
401: GGGYIELNSW IPSSDRSPPL WTLLGRKHSS NFVYNCAVMG C

Arabidopsis Description

At1g14330/F14L17_7 [Source:UniProtKB/TrEMBL;Acc:Q9M9S9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.