Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G540000.1 | Wheat | cytosol | 94.2 | 95.08 |
| TraesCS3B01G611700.1 | Wheat | cytosol | 94.2 | 95.08 |
| TraesCS4A01G020200.1 | Wheat | cytosol | 89.1 | 89.3 |
| HORVU3Hr1G116690.2 | Barley | mitochondrion | 93.5 | 82.75 |
| Os03t0167800-02 | Rice | cytosol | 78.19 | 76.94 |
| EER95442 | Sorghum | mitochondrion | 75.87 | 74.66 |
| Zm00001d027827_P001 | Maize | cytosol, mitochondrion, nucleus | 74.48 | 73.12 |
| GSMUA_Achr7P27010_001 | Banana | cytosol | 66.59 | 68.99 |
| GSMUA_Achr3P29560_001 | Banana | cytosol | 64.73 | 67.88 |
| VIT_06s0004g00860.t01 | Wine grape | cytosol | 66.36 | 65.45 |
| PGSC0003DMT400081852 | Potato | cytosol | 66.36 | 65.45 |
| CDY08233 | Canola | mitochondrion | 65.89 | 65.29 |
| Solyc01g005970.2.1 | Tomato | cytosol | 66.13 | 65.22 |
| Bra011908.1-P | Field mustard | mitochondrion | 65.43 | 64.83 |
| CDY26117 | Canola | cytosol | 65.43 | 64.83 |
| AT1G55270.1 | Thale cress | mitochondrion | 65.2 | 64.75 |
| PGSC0003DMT400034149 | Potato | cytosol | 65.43 | 64.53 |
| KRH42810 | Soybean | cytosol | 65.2 | 64.3 |
| KRH58897 | Soybean | cytosol | 65.2 | 64.3 |
| Solyc01g022740.2.1 | Tomato | cytosol | 64.97 | 64.07 |
| CDY02451 | Canola | cytosol | 64.5 | 63.91 |
| CDY10574 | Canola | cytosol | 64.5 | 63.91 |
| Bra030872.1-P | Field mustard | cytosol | 64.27 | 63.68 |
| CDY33062 | Canola | mitochondrion, plastid | 61.95 | 61.38 |
| CDY24045 | Canola | mitochondrion | 61.95 | 61.38 |
| Bra037989.1-P | Field mustard | cytosol, plastid | 61.48 | 60.92 |
| KRH11716 | Soybean | cytosol, golgi, plastid | 47.56 | 55.11 |
| KRH36711 | Soybean | cytosol | 45.71 | 48.88 |
| TraesCS6A01G175700.1 | Wheat | plastid | 47.8 | 48.7 |
| GSMUA_Achr4P03630_001 | Banana | plasma membrane | 60.09 | 30.51 |
| TraesCS2A01G499700.1 | Wheat | cytosol, mitochondrion | 22.51 | 24.37 |
| TraesCS6A01G037900.1 | Wheat | cytosol | 20.42 | 24.24 |
| TraesCS7A01G004600.1 | Wheat | cytosol | 19.95 | 23.63 |
| TraesCS3A01G446400.1 | Wheat | cytosol, plastid | 20.88 | 23.38 |
| TraesCS4A01G493800.1 | Wheat | cytosol | 13.46 | 23.11 |
| TraesCS4A01G487800.1 | Wheat | cytosol | 13.69 | 22.87 |
| TraesCS2A01G280900.1 | Wheat | mitochondrion | 20.19 | 22.72 |
| TraesCS4A01G472100.1 | Wheat | cytosol | 24.13 | 22.71 |
| TraesCS7A01G020100.1 | Wheat | cytosol, plastid | 23.67 | 22.37 |
| TraesCS4A01G016200.1 | Wheat | cytosol | 22.27 | 22.27 |
| TraesCS4A01G492300.1 | Wheat | cytosol, golgi, plastid | 19.72 | 22.08 |
| TraesCS2A01G462600.1 | Wheat | cytosol | 22.51 | 21.6 |
| TraesCS5A01G544300.1 | Wheat | extracellular, plasma membrane | 14.15 | 21.33 |
| TraesCS4A01G489300.1 | Wheat | cytosol | 18.79 | 21.26 |
| TraesCS4A01G489600.1 | Wheat | cytosol | 18.56 | 21.16 |
| TraesCS7A01G496600.1 | Wheat | cytosol | 18.56 | 20.78 |
| TraesCS6A01G306000.1 | Wheat | cytosol | 20.19 | 20.47 |
| TraesCS6A01G211500.1 | Wheat | extracellular, golgi | 12.76 | 17.86 |
| TraesCS4A01G493200.1 | Wheat | cytosol, plasma membrane | 17.63 | 16.03 |
| TraesCS4A01G491100.1 | Wheat | cytosol | 19.03 | 15.59 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G534600.1 | EnsemblPlantsGene:TraesCS3A01G534600 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24412 | PANTHER:PTHR24412:SF234 | PFAM:PF01344 |
| SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | MapMan:9.2.1.1.3 | : | : |
Description
No Description!
Coordinates
chr3A:-:746354139..746355434
Molecular Weight (calculated)
49148.5 Da
IEP (calculated)
9.793
GRAVY (calculated)
-0.332
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKGILYDWS MCLQGESVSC YCRVDGGLKT VVNARKFVPG ARLCMQPDVK PNKRKSRSSR KERCRTQAPL LPGLPDDLAI SCLMRVSRAE HPNLHLVCRK
101: WSRLLSGNYY YSLRKKCGME EEWVYVFKRD RDQKLSWHAF DPVHQLWRSL PPVPPEYSEA VGFGCAVLSG CYLYLFGGKN PVRGSMRHVV YYNTRTNKWY
201: RAPDMLRKRH LFGSCVINNC LYVAGGECEG TQRTLRSAEV YNPNRTRWSC ITEMNTGMVP FTGVVYDGKW FLKGLDSHRQ VVSEVYLPTS NTWSTTGNAL
301: VAALRNPTIS FNGRLYSADC RDACKLRVYD GDIGLWTRFM DSRRHLGSSR AFEAVALVSL NGKICVIRNN MGMTLVDVCD PTKVIEMESA RVWETFARKG
401: HQHRSLMANL WSAIAGRNLK AHIIHCQVLQ A
101: WSRLLSGNYY YSLRKKCGME EEWVYVFKRD RDQKLSWHAF DPVHQLWRSL PPVPPEYSEA VGFGCAVLSG CYLYLFGGKN PVRGSMRHVV YYNTRTNKWY
201: RAPDMLRKRH LFGSCVINNC LYVAGGECEG TQRTLRSAEV YNPNRTRWSC ITEMNTGMVP FTGVVYDGKW FLKGLDSHRQ VVSEVYLPTS NTWSTTGNAL
301: VAALRNPTIS FNGRLYSADC RDACKLRVYD GDIGLWTRFM DSRRHLGSSR AFEAVALVSL NGKICVIRNN MGMTLVDVCD PTKVIEMESA RVWETFARKG
401: HQHRSLMANL WSAIAGRNLK AHIIHCQVLQ A
001: MDLSSQRQSP NGSRGFRLQA PLVDSVSCYC RVDSGLKTVV EARKFVPGSK LCIQPDINPN AHRRKNSKRE RTRIQPPLLP GLPDDLAVAC LIRVPRAEHR
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
101: KLRLVCKRWY RLASGNFFYS QRKLLGMSEE WVYVFKRDRD GKISWNTFDP ISQLWQPLPP VPREYSEAVG FGCAVLSGCH LYLFGGKDPL RGSMRRVIFY
201: NARTNKWHRA PDMLRKRHFF GCCVINNCLY VAGGECEGIQ RTLRSAEVYD PNKNRWSFIA DMSTAMVPLI GVVYDKKWFL KGLGSHQLVM SEAYDPEVNS
301: WSPVSDGMVA GWRNPCTSLN GRLYGLDCRD GCKLRVFDES TDSWNKFMDS KAHLGNSKSL EAAALVPLHN KLCIIRNNMS MSLVDVSNPD KNNPRLWENI
401: AVKGQSKSIL SNIWSSIAGR ALKSHIVHCQ VLQA
Arabidopsis Description
F-box/kelch-repeat protein At1g55270 [Source:UniProtKB/Swiss-Prot;Acc:Q93W93]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.